RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 MIGA1Q8NAN2 632 aa15.79■□□□□ 0.12
R3HDM1-213ENST00000463230 TBC1D2Q9BYX2 928 aa15.79■□□□□ 0.12
R3HDM1-213ENST00000463230 GINM1Q9NU53 330 aa15.79■□□□□ 0.12
R3HDM1-213ENST00000463230 DDX60LQ5H9U9 1706 aaKnown RBP15.79■□□□□ 0.12
R3HDM1-213ENST00000463230 USP5P45974 858 aa15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 SCYL3Q8IZE3 742 aa15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 PI4K2BQ8TCG2 481 aa15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 EDC3Q96F86 508 aaKnown RBP15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 ZCCHC17Q9NP64 241 aaKnown RBP15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 NAV1Q8NEY1 1877 aa15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 SIPA1L1O43166 1804 aa15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 INPP5BP32019 993 aa15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 MAPKAPK5Q8IW41 473 aa15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 ZKSCAN4Q969J2 545 aaPredicted RBP15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 EHD4Q9H223 541 aa15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.78■□□□□ 0.12
R3HDM1-213ENST00000463230 LBX1P52954 281 aa15.77■□□□□ 0.12
R3HDM1-213ENST00000463230 IFNL1Q8IU54 200 aa15.77■□□□□ 0.12
R3HDM1-213ENST00000463230 PICK1Q9NRD5 415 aa15.77■□□□□ 0.12
R3HDM1-213ENST00000463230 CETPP11597 493 aa15.76■□□□□ 0.11
R3HDM1-213ENST00000463230 PRKCSHP14314 528 aaPredicted RBP15.76■□□□□ 0.11
R3HDM1-213ENST00000463230 NUCB1Q02818 461 aa15.76■□□□□ 0.11
R3HDM1-213ENST00000463230 MKRN3Q13064 507 aaKnown RBP15.76■□□□□ 0.11
R3HDM1-213ENST00000463230 SNAPC2Q13487 334 aa15.76■□□□□ 0.11
R3HDM1-213ENST00000463230 TTC6Q86TZ1 520 aa15.76■□□□□ 0.11
R3HDM1-213ENST00000463230 OTUD5Q96G74 571 aa15.76■□□□□ 0.11
R3HDM1-213ENST00000463230 MS4A4AQ96JQ5 239 aa15.76■□□□□ 0.11
R3HDM1-213ENST00000463230 KCNH4Q9UQ05 1017 aa15.76■□□□□ 0.11
R3HDM1-213ENST00000463230 IGHDP01880 384 aa15.76■□□□□ 0.11
R3HDM1-213ENST00000463230 CXCL11O14625 94 aa15.75■□□□□ 0.11
R3HDM1-213ENST00000463230 CHD1LQ86WJ1 897 aa15.75■□□□□ 0.11
R3HDM1-213ENST00000463230 OTUD7AQ8TE49 926 aaPredicted RBP15.75■□□□□ 0.11
R3HDM1-213ENST00000463230 TRIM34Q9BYJ4 488 aa15.75■□□□□ 0.11
R3HDM1-213ENST00000463230 ATP8A2Q9NTI2 1148 aa15.75■□□□□ 0.11
R3HDM1-213ENST00000463230 RNF113AO15541 343 aaKnown RBP15.75■□□□□ 0.11
R3HDM1-213ENST00000463230 TRPA1O75762 1119 aa15.75■□□□□ 0.11
R3HDM1-213ENST00000463230 PDE1AP54750 535 aa15.75■□□□□ 0.11
R3HDM1-213ENST00000463230 APPBP2Q92624 585 aa15.75■□□□□ 0.11
R3HDM1-213ENST00000463230 ATAD5Q96QE3 1844 aa15.75■□□□□ 0.11
R3HDM1-213ENST00000463230 CRACR2BQ8N4Y2 399 aaPredicted RBP15.74■□□□□ 0.11
R3HDM1-213ENST00000463230 CCL15-CCL14A0A0B4J2E2 113 aa15.74■□□□□ 0.11
R3HDM1-213ENST00000463230 MBD4O95243 580 aa15.74■□□□□ 0.11
R3HDM1-213ENST00000463230 PTPRAP18433 802 aa15.74■□□□□ 0.11
R3HDM1-213ENST00000463230 CCL15Q16663 113 aa15.74■□□□□ 0.11
R3HDM1-213ENST00000463230 TSHZ3Q63HK5 1081 aa15.74■□□□□ 0.11
R3HDM1-213ENST00000463230 LCORLQ8N3X6 602 aa15.74■□□□□ 0.11
R3HDM1-213ENST00000463230 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
R3HDM1-213ENST00000463230 OSBPL3Q9H4L5 887 aa15.74■□□□□ 0.11
R3HDM1-213ENST00000463230 PALD1Q9ULE6 856 aa15.74■□□□□ 0.11
R3HDM1-213ENST00000463230 PHIPQ8WWQ0 1821 aa15.73■□□□□ 0.11
R3HDM1-213ENST00000463230 IRF6O14896 467 aa15.73■□□□□ 0.11
R3HDM1-213ENST00000463230 CAP2P40123 477 aa15.73■□□□□ 0.11
R3HDM1-213ENST00000463230 BRI3BPQ8WY22 251 aa15.73■□□□□ 0.11
R3HDM1-213ENST00000463230 EVI5LQ96CN4 794 aa15.73■□□□□ 0.11
R3HDM1-213ENST00000463230 GNAT2P19087 354 aa15.72■□□□□ 0.11
R3HDM1-213ENST00000463230 GIMAP6Q6P9H5 292 aa15.72■□□□□ 0.11
R3HDM1-213ENST00000463230 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
R3HDM1-213ENST00000463230 ARMT1Q9H993 441 aa15.72■□□□□ 0.11
R3HDM1-213ENST00000463230 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.72■□□□□ 0.11
R3HDM1-213ENST00000463230 SAP30BPQ9UHR5 308 aaKnown RBP15.72■□□□□ 0.11
R3HDM1-213ENST00000463230 SERPINB13Q9UIV8 391 aa15.72■□□□□ 0.11
R3HDM1-213ENST00000463230 IGF2BP3O00425 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
R3HDM1-213ENST00000463230 DCP1AQ9NPI6 582 aaPredicted RBP15.72■□□□□ 0.11
R3HDM1-213ENST00000463230 ASNSP08243 561 aa15.71■□□□□ 0.11
R3HDM1-213ENST00000463230 ANKRD23Q86SG2 305 aa15.71■□□□□ 0.11
R3HDM1-213ENST00000463230 AMOTL1Q8IY63 956 aa15.71■□□□□ 0.11
R3HDM1-213ENST00000463230 FSD1Q9BTV5 496 aa15.71■□□□□ 0.11
R3HDM1-213ENST00000463230 AFG3L2Q9Y4W6 797 aa15.71■□□□□ 0.11
R3HDM1-213ENST00000463230 POLR3DP05423 398 aaPredicted RBP15.71■□□□□ 0.1
R3HDM1-213ENST00000463230 COL13A1Q5TAT6 717 aaPredicted RBP15.71■□□□□ 0.1
R3HDM1-213ENST00000463230 TATDN1Q6P1N9 297 aa15.71■□□□□ 0.1
R3HDM1-213ENST00000463230 FASTKD5Q7L8L6 764 aaKnown RBP15.71■□□□□ 0.1
R3HDM1-213ENST00000463230 PTPN18Q99952 460 aa15.71■□□□□ 0.1
R3HDM1-213ENST00000463230 DNAJC18Q9H819 358 aa15.71■□□□□ 0.1
R3HDM1-213ENST00000463230 AS3MTQ9HBK9 375 aa15.71■□□□□ 0.1
R3HDM1-213ENST00000463230 MCM9Q9NXL9 1143 aa15.71■□□□□ 0.1
R3HDM1-213ENST00000463230 ZHX2Q9Y6X8 837 aa15.71■□□□□ 0.1
R3HDM1-213ENST00000463230 PTPRFP10586 1907 aa15.71■□□□□ 0.1
R3HDM1-213ENST00000463230 STRBPQ96SI9 672 aaKnown RBP15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 PUS7LQ9H0K6 701 aaKnown RBP15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 SWAP70Q9UH65 585 aa15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 TSKSQ9UJT2 592 aa15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 SLC45A1Q9Y2W3 748 aa15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 A0A0G2JLL6 359 aaPredicted RBP15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 FAM196BA6NMK8 535 aa15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 USP17L5A8MUK1 530 aa15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 IRX6P78412 446 aaPredicted RBP15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 B4GALNT3Q6L9W6 998 aa15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 PRRT2Q7Z6L0 340 aaPredicted RBP15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 WDR18Q9BV38 432 aa15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 SLC4A4Q9Y6R1 1079 aa15.7■□□□□ 0.1
R3HDM1-213ENST00000463230 GABPAQ06546 454 aa15.69■□□□□ 0.1
R3HDM1-213ENST00000463230 ZMYM1Q5SVZ6 1142 aa15.69■□□□□ 0.1
R3HDM1-213ENST00000463230 PLEKHM2Q8IWE5 1019 aa15.69■□□□□ 0.1
R3HDM1-213ENST00000463230 SDR42E1Q8WUS8 393 aa15.69■□□□□ 0.1
R3HDM1-213ENST00000463230 OSBP2Q969R2 916 aa15.69■□□□□ 0.1
R3HDM1-213ENST00000463230 ZFYVE28Q9HCC9 887 aa15.69■□□□□ 0.1
R3HDM1-213ENST00000463230 GPR25O00155 361 aa15.68■□□□□ 0.1
R3HDM1-213ENST00000463230 TBC1D8O95759 1140 aa15.68■□□□□ 0.1
R3HDM1-213ENST00000463230 ARPP21Q9UBL0 812 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms