RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 MYH1P12882 1939 aa15.88■□□□□ 0.13
HDAC1-203ENST00000463172 BTBD19C9JJ37 291 aa15.88■□□□□ 0.13
HDAC1-203ENST00000463172 GOLIM4O00461 696 aa15.88■□□□□ 0.13
HDAC1-203ENST00000463172 ATP5JP18859 108 aa15.88■□□□□ 0.13
HDAC1-203ENST00000463172 SLC9C2Q5TAH2 1124 aa15.88■□□□□ 0.13
HDAC1-203ENST00000463172 ADGRA1Q86SQ6 560 aa15.88■□□□□ 0.13
HDAC1-203ENST00000463172 R3HDMLQ9H3Y0 253 aa15.88■□□□□ 0.13
HDAC1-203ENST00000463172 AS3MTQ9HBK9 375 aa15.88■□□□□ 0.13
HDAC1-203ENST00000463172 ZBTB47Q9UFB7 747 aaPredicted RBP15.88■□□□□ 0.13
HDAC1-203ENST00000463172 TRIM17Q9Y577 477 aa15.88■□□□□ 0.13
HDAC1-203ENST00000463172 ATAD5Q96QE3 1844 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 MAGEB6P1A0A0J9YX57 407 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 TLR2O60603 784 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 ZSCAN25Q6NSZ9 544 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 TTC6Q86TZ1 520 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 MIGA1Q8NAN2 632 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 PARK7Q99497 189 aaKnown RBP15.87■□□□□ 0.13
HDAC1-203ENST00000463172 ANTXR1Q9H6X2 564 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 DCTPP1Q9H773 170 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 EFCC1Q9HA90 598 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 GINM1Q9NU53 330 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 PAG1Q9NWQ8 432 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 NDUFB9Q9Y6M9 179 aa15.87■□□□□ 0.13
HDAC1-203ENST00000463172 PDHXO00330 501 aa15.86■□□□□ 0.13
HDAC1-203ENST00000463172 CAP2P40123 477 aa15.86■□□□□ 0.13
HDAC1-203ENST00000463172 DYNLL1P63167 89 aaKnown RBP15.86■□□□□ 0.13
HDAC1-203ENST00000463172 CD99L2Q8TCZ2 262 aa15.86■□□□□ 0.13
HDAC1-203ENST00000463172 CRNKL1Q9BZJ0 848 aaKnown RBP15.86■□□□□ 0.13
HDAC1-203ENST00000463172 BOLA2Q9H3K6 86 aa15.86■□□□□ 0.13
HDAC1-203ENST00000463172 HPS5Q9UPZ3 1129 aa15.86■□□□□ 0.13
HDAC1-203ENST00000463172 AFG3L2Q9Y4W6 797 aa15.86■□□□□ 0.13
HDAC1-203ENST00000463172 A0A0G2JLL6 359 aaPredicted RBP15.85■□□□□ 0.13
HDAC1-203ENST00000463172 USP17L5A8MUK1 530 aa15.85■□□□□ 0.13
HDAC1-203ENST00000463172 ASNSP08243 561 aa15.85■□□□□ 0.13
HDAC1-203ENST00000463172 PDE6AP16499 860 aa15.85■□□□□ 0.13
HDAC1-203ENST00000463172 AAMPQ13685 434 aa15.85■□□□□ 0.13
HDAC1-203ENST00000463172 GADL1Q6ZQY3 521 aa15.85■□□□□ 0.13
HDAC1-203ENST00000463172 PRRT2Q7Z6L0 340 aaPredicted RBP15.85■□□□□ 0.13
HDAC1-203ENST00000463172 HAUS7Q99871 368 aa15.85■□□□□ 0.13
HDAC1-203ENST00000463172 SLC45A1Q9Y2W3 748 aa15.85■□□□□ 0.13
HDAC1-203ENST00000463172 MYH7P12883 1935 aa15.85■□□□□ 0.13
HDAC1-203ENST00000463172 PTPRFP10586 1907 aa15.84■□□□□ 0.13
HDAC1-203ENST00000463172 TRIM75PA6NK02 468 aa15.84■□□□□ 0.13
HDAC1-203ENST00000463172 FAM196BA6NMK8 535 aa15.84■□□□□ 0.13
HDAC1-203ENST00000463172 GNRH1P01148 92 aa15.84■□□□□ 0.13
HDAC1-203ENST00000463172 PABPC4Q13310 644 aaKnown RBP eCLIP15.84■□□□□ 0.13
HDAC1-203ENST00000463172 OTOP1Q7RTM1 612 aa15.84■□□□□ 0.13
HDAC1-203ENST00000463172 DDRGK1Q96HY6 314 aa15.84■□□□□ 0.13
HDAC1-203ENST00000463172 ECHDC1Q9NTX5 307 aa15.84■□□□□ 0.13
HDAC1-203ENST00000463172 SAP30BPQ9UHR5 308 aaKnown RBP15.84■□□□□ 0.13
HDAC1-203ENST00000463172 PNMA3Q9UL41 463 aa15.84■□□□□ 0.13
HDAC1-203ENST00000463172 PALD1Q9ULE6 856 aa15.84■□□□□ 0.13
HDAC1-203ENST00000463172 ZNF532Q9HCE3 1301 aa15.84■□□□□ 0.13
HDAC1-203ENST00000463172 PHIPQ8WWQ0 1821 aa15.84■□□□□ 0.13
HDAC1-203ENST00000463172 LRRFIP1Q32MZ4 808 aaKnown RBP15.83■□□□□ 0.12
HDAC1-203ENST00000463172 AMOTL1Q8IY63 956 aa15.83■□□□□ 0.12
HDAC1-203ENST00000463172 ZNF280CQ8ND82 737 aa15.83■□□□□ 0.12
HDAC1-203ENST00000463172 NAV1Q8NEY1 1877 aa15.82■□□□□ 0.12
HDAC1-203ENST00000463172 ERC2O15083 957 aa15.82■□□□□ 0.12
HDAC1-203ENST00000463172 SMARCA5O60264 1052 aaPredicted RBP15.82■□□□□ 0.12
HDAC1-203ENST00000463172 POLR3DP05423 398 aaPredicted RBP15.82■□□□□ 0.12
HDAC1-203ENST00000463172 HOXD10P28358 340 aa15.82■□□□□ 0.12
HDAC1-203ENST00000463172 PRMT2P55345 433 aa15.82■□□□□ 0.12
HDAC1-203ENST00000463172 METTL16Q86W50 562 aaKnown RBP15.82■□□□□ 0.12
HDAC1-203ENST00000463172 PROCA1Q8NCQ7 364 aaPredicted RBP15.82■□□□□ 0.12
HDAC1-203ENST00000463172 EHD4Q9H223 541 aa15.82■□□□□ 0.12
HDAC1-203ENST00000463172 SERPINB13Q9UIV8 391 aa15.82■□□□□ 0.12
HDAC1-203ENST00000463172 TAOK2Q9UL54 1235 aa15.82■□□□□ 0.12
HDAC1-203ENST00000463172 PTPN22Q9Y2R2 807 aa15.82■□□□□ 0.12
HDAC1-203ENST00000463172 SIPA1L1O43166 1804 aa15.81■□□□□ 0.12
HDAC1-203ENST00000463172 LACTBP83111 547 aaPredicted RBP15.81■□□□□ 0.12
HDAC1-203ENST00000463172 SPP2Q13103 211 aa15.81■□□□□ 0.12
HDAC1-203ENST00000463172 SMCR8Q8TEV9 937 aaPredicted RBP15.81■□□□□ 0.12
HDAC1-203ENST00000463172 RIOK1Q9BRS2 568 aaKnown RBP15.81■□□□□ 0.12
HDAC1-203ENST00000463172 TMOD4Q9NZQ9 345 aa15.81■□□□□ 0.12
HDAC1-203ENST00000463172 AGTPBP1Q9UPW5 1226 aa15.81■□□□□ 0.12
HDAC1-203ENST00000463172 SLURP2P0DP57 97 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 OSBPP22059 807 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 ADD2P35612 726 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 RGS19P49795 217 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 MLLT1Q03111 559 aaPredicted RBP15.8■□□□□ 0.12
HDAC1-203ENST00000463172 MOGSQ13724 837 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 UBE3CQ15386 1083 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 GPAT2Q6NUI2 795 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 C17orf99Q6UX52 265 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 NBPF11Q86T75 865 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 WDR18Q9BV38 432 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 CABP5Q9NP86 173 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 MCM9Q9NXL9 1143 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 CPA4Q9UI42 421 aa15.8■□□□□ 0.12
HDAC1-203ENST00000463172 TTC41PQ6P2S7 1318 aa15.79■□□□□ 0.12
HDAC1-203ENST00000463172 TCRBV5S4A2TA0A5A2 114 aa15.79■□□□□ 0.12
HDAC1-203ENST00000463172 C19orf81C9J6K1 198 aa15.79■□□□□ 0.12
HDAC1-203ENST00000463172 GCC1Q96CN9 775 aa15.79■□□□□ 0.12
HDAC1-203ENST00000463172 CRBNQ96SW2 442 aa15.79■□□□□ 0.12
HDAC1-203ENST00000463172 ATP8A2Q9NTI2 1148 aa15.79■□□□□ 0.12
HDAC1-203ENST00000463172 ZBTB21Q9ULJ3 1066 aa15.79■□□□□ 0.12
HDAC1-203ENST00000463172 PCDHB15Q9Y5E8 787 aa15.79■□□□□ 0.12
HDAC1-203ENST00000463172 LOC285556D6RIA3 1793 aa15.78■□□□□ 0.12
HDAC1-203ENST00000463172 USP17L10C9JJH3 530 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms