RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 NBPF14Q5TI25 921 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 TAOK1Q7L7X3 1001 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 SEC62Q99442 399 aaKnown RBP17.67■□□□□ 0.42
SMC4-204ENST00000462787 IQCGQ9H095 443 aaKnown RBP17.67■□□□□ 0.42
SMC4-204ENST00000462787 PRDM11Q9NQV5 511 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 RCOR1Q9UKL0 485 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 ZSCAN20P17040 1043 aaPredicted RBP17.67■□□□□ 0.42
SMC4-204ENST00000462787 STMN2Q93045 179 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 ATP5JP18859 108 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 ANKLE2Q86XL3 938 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 MAP4K1Q92918 833 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 DBNDD2Q9BQY9 259 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 KDM6BO15054 1643 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 E7EWF7 191 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 CYP7A1P22680 504 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 KRT79Q5XKE5 535 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 USP44Q9H0E7 712 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 SERTAD1Q9UHV2 236 aa17.67■□□□□ 0.42
SMC4-204ENST00000462787 RAD51AP2Q09MP3 1159 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 SLC9C1Q4G0N8 1177 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 MMS22LQ6ZRQ5 1243 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 SIRT2Q8IXJ6 389 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 PPANQ9NQ55 473 aaKnown RBP17.66■□□□□ 0.42
SMC4-204ENST00000462787 HYOU1Q9Y4L1 999 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 CNNM4Q6P4Q7 775 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 NELFBQ8WX92 580 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 ANKRD7Q92527 254 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 APPBP2Q92624 585 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 TCP1P17987 556 aaKnown RBP17.66■□□□□ 0.42
SMC4-204ENST00000462787 NEDD9Q14511 834 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 ZNF652Q9Y2D9 606 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 HEATR3Q7Z4Q2 680 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 FEZ2Q9UHY8 353 aaPredicted RBP17.66■□□□□ 0.42
SMC4-204ENST00000462787 ADAM21Q9UKJ8 722 aa17.66■□□□□ 0.42
SMC4-204ENST00000462787 IRX5P78411 483 aaPredicted RBP17.65■□□□□ 0.42
SMC4-204ENST00000462787 DAAM2Q86T65 1068 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 PLA2G4DQ86XP0 818 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 PPP1R14CQ8TAE6 165 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 MICAL1Q8TDZ2 1067 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 C6orf50Q9HD87 102 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 CCDC160A6NGH7 325 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 GKAP1Q5VSY0 366 aaPredicted RBP17.65■□□□□ 0.42
SMC4-204ENST00000462787 SPATA1Q5VX52 437 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 CUL5Q93034 780 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 IFIH1Q9BYX4 1025 aaKnown RBP17.65■□□□□ 0.42
SMC4-204ENST00000462787 CCDC84Q86UT8 332 aaPredicted RBP17.65■□□□□ 0.42
SMC4-204ENST00000462787 RIPOR2Q9Y4F9 1068 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 CYP2E1P05181 493 aaPredicted RBP17.65■□□□□ 0.42
SMC4-204ENST00000462787 PDE4DQ08499 809 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 ADCK5Q3MIX3 580 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 AP1ARQ63HQ0 302 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 CCDC25Q86WR0 208 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 SYCP3Q8IZU3 236 aa17.65■□□□□ 0.42
SMC4-204ENST00000462787 PPP2R5BQ15173 497 aa17.64■□□□□ 0.42
SMC4-204ENST00000462787 DPCR1Q3MIW9 517 aa17.64■□□□□ 0.42
SMC4-204ENST00000462787 CCDC38Q502W7 563 aa17.64■□□□□ 0.42
SMC4-204ENST00000462787 RGS22Q8NE09 1264 aa17.64■□□□□ 0.42
SMC4-204ENST00000462787 VAT1LQ9HCJ6 419 aa17.64■□□□□ 0.42
SMC4-204ENST00000462787 A0A0D9SFI3 127 aa17.64■□□□□ 0.41
SMC4-204ENST00000462787 RAPGEF1Q13905 1077 aa17.64■□□□□ 0.41
SMC4-204ENST00000462787 KRT71Q3SY84 523 aa17.64■□□□□ 0.41
SMC4-204ENST00000462787 NUCKS1Q9H1E3 243 aaKnown RBP17.64■□□□□ 0.41
SMC4-204ENST00000462787 YTHDC2Q9H6S0 1430 aaKnown RBP17.64■□□□□ 0.41
SMC4-204ENST00000462787 B4E1Z4 1266 aa17.64■□□□□ 0.41
SMC4-204ENST00000462787 GPTP24298 496 aa17.64■□□□□ 0.41
SMC4-204ENST00000462787 PPP1R7Q15435 360 aa17.64■□□□□ 0.41
SMC4-204ENST00000462787 SLC35F6Q8N357 371 aa17.64■□□□□ 0.41
SMC4-204ENST00000462787 MAGI3Q5TCQ9 1506 aa17.64■□□□□ 0.41
SMC4-204ENST00000462787 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
SMC4-204ENST00000462787 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
SMC4-204ENST00000462787 LDHCP07864 332 aa17.64■□□□□ 0.41
SMC4-204ENST00000462787 CLUL1Q15846 466 aa17.64■□□□□ 0.41
SMC4-204ENST00000462787 ATP1A2P50993 1020 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 CEP128Q6ZU80 1094 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 SV2BQ7L1I2 683 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 NAPAP54920 295 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 TTC38Q5R3I4 469 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 SEL1L2Q5TEA6 688 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 CDC5LQ99459 802 aaKnown RBP17.63■□□□□ 0.41
SMC4-204ENST00000462787 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.63■□□□□ 0.414e-98■■■■■ 943.1
SMC4-204ENST00000462787 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.63■□□□□ 0.41
SMC4-204ENST00000462787 KLHL7Q8IXQ5 586 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 EPN1Q9Y6I3 576 aaPredicted RBP17.63■□□□□ 0.41
SMC4-204ENST00000462787 RPS6KA1Q15418 735 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 CC2D1AQ6P1N0 951 aaPredicted RBP17.63■□□□□ 0.41
SMC4-204ENST00000462787 VSIG1Q86XK7 387 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 UNC5CLQ8IV45 518 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 VSTM4Q8IW00 320 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 POLR3EQ9NVU0 708 aa17.63■□□□□ 0.41
SMC4-204ENST00000462787 BAG3O95817 575 aa17.62■□□□□ 0.41
SMC4-204ENST00000462787 CASP8Q14790 479 aa17.62■□□□□ 0.41
SMC4-204ENST00000462787 MAPK8IP1Q9UQF2 711 aa17.62■□□□□ 0.41
SMC4-204ENST00000462787 ZNF608Q9ULD9 1512 aaPredicted RBP17.62■□□□□ 0.41
SMC4-204ENST00000462787 MPHOSPH10O00566 681 aaKnown RBP17.62■□□□□ 0.41
SMC4-204ENST00000462787 CEP104O60308 925 aa17.62■□□□□ 0.41
SMC4-204ENST00000462787 ERCC5P28715 1186 aaPredicted RBP17.62■□□□□ 0.41
SMC4-204ENST00000462787 PTCH1Q13635 1447 aa17.62■□□□□ 0.41
SMC4-204ENST00000462787 EYA2O00167 538 aa17.62■□□□□ 0.41
SMC4-204ENST00000462787 TADA2BQ86TJ2 420 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms