RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 EGFRP00533 1210 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 MCM5P33992 734 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 PLCD1P51178 756 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 HIRAP54198 1017 aaPredicted RBP12.62□□□□□ -0.39
RTF1-202ENST00000462276 CACNB3P54284 484 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 MAP3K10Q02779 954 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 GABPAQ06546 454 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 TCP10Q12799 353 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 RASA3Q14644 834 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 ANKRD1Q15327 319 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 SUPT20HL1Q3ZLR7 823 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 SULF1Q8IWU6 871 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 FBXL16Q8N461 479 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 CCDC17Q96LX7 622 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 TRIM34Q9BYJ4 488 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 ALDH8A1Q9H2A2 487 aaPredicted RBP12.62□□□□□ -0.39
RTF1-202ENST00000462276 MKNK2Q9HBH9 465 aa12.62□□□□□ -0.39
RTF1-202ENST00000462276 MYH7P12883 1935 aa12.61□□□□□ -0.39
RTF1-202ENST00000462276 CASTP20810 708 aaKnown RBP12.61□□□□□ -0.39
RTF1-202ENST00000462276 SART3Q15020 963 aaKnown RBP12.61□□□□□ -0.39
RTF1-202ENST00000462276 ANGEL2Q5VTE6 544 aaKnown RBP12.61□□□□□ -0.39
RTF1-202ENST00000462276 TBC1D10CQ8IV04 446 aa12.61□□□□□ -0.39
RTF1-202ENST00000462276 ZNF444Q8N0Y2 327 aaPredicted RBP12.61□□□□□ -0.39
RTF1-202ENST00000462276 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
RTF1-202ENST00000462276 CRACR2BQ8N4Y2 399 aaPredicted RBP12.61□□□□□ -0.39
RTF1-202ENST00000462276 TMEM87BQ96K49 555 aa12.61□□□□□ -0.39
RTF1-202ENST00000462276 CSRNP1Q96S65 589 aa12.61□□□□□ -0.39
RTF1-202ENST00000462276 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
RTF1-202ENST00000462276 GGA3Q9NZ52 723 aa12.61□□□□□ -0.39
RTF1-202ENST00000462276 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
RTF1-202ENST00000462276 MYH2Q9UKX2 1941 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 CNTNAP1P78357 1384 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 DDTLA6NHG4 134 aaPredicted RBP12.6□□□□□ -0.39
RTF1-202ENST00000462276 POTECB2RU33 542 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 CYP2D6P10635 497 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 RPS6KB1P23443 525 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 ANP32AP39687 249 aaKnown RBP12.6□□□□□ -0.39
RTF1-202ENST00000462276 CDK8P49336 464 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 NEK4P51957 841 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 CTDSPL2Q05D32 466 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 DCAF15Q66K64 600 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 STOX1Q6ZVD7 989 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 SH3BP5LQ7L8J4 393 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 IQCA1Q86XH1 822 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 ZFPM1Q8IX07 1006 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 SNX21Q969T3 373 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 GINM1Q9NU53 330 aa12.6□□□□□ -0.39
RTF1-202ENST00000462276 CYP2D7A0A087X1C5 515 aa12.59□□□□□ -0.39
RTF1-202ENST00000462276 EXOSC10Q01780 885 aaKnown RBP12.59□□□□□ -0.39
RTF1-202ENST00000462276 ADCK5Q3MIX3 580 aa12.59□□□□□ -0.39
RTF1-202ENST00000462276 CDC37L1Q7L3B6 337 aa12.59□□□□□ -0.39
RTF1-202ENST00000462276 MB21D2Q8IYB1 491 aaPredicted RBP12.59□□□□□ -0.39
RTF1-202ENST00000462276 CHMP4CQ96CF2 233 aa12.59□□□□□ -0.39
RTF1-202ENST00000462276 TOMM22Q9NS69 142 aa12.59□□□□□ -0.39
RTF1-202ENST00000462276 PDRG1Q9NUG6 133 aa12.59□□□□□ -0.39
RTF1-202ENST00000462276 TCP11L1Q9NUJ3 509 aa12.59□□□□□ -0.39
RTF1-202ENST00000462276 ZSWIM5Q9P217 1185 aa12.59□□□□□ -0.39
RTF1-202ENST00000462276 RBM19Q9Y4C8 960 aaKnown RBP12.59□□□□□ -0.39
RTF1-202ENST00000462276 ZNF646O15015 1829 aaPredicted RBP12.59□□□□□ -0.39
RTF1-202ENST00000462276 ERICH2A1L162 156 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 RANBP6O60518 1105 aaKnown RBP12.58□□□□□ -0.4
RTF1-202ENST00000462276 KDM4AO75164 1064 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 TATDN1Q6P1N9 297 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 KRT26Q7Z3Y9 468 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 LDHDQ86WU2 507 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 NEDD1Q8NHV4 660 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 TEPSINQ96N21 525 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 TTC14Q96N46 770 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 UBAC1Q9BSL1 405 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 TMEM39BQ9GZU3 492 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 RRAGCQ9HB90 399 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 MYO5AQ9Y4I1 1855 aaKnown RBP12.58□□□□□ -0.4
RTF1-202ENST00000462276 TAF6LQ9Y6J9 622 aa12.58□□□□□ -0.4
RTF1-202ENST00000462276 TSPY2A6NKD2 308 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 B4E1Z4 1266 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 PRC1O43663 620 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 RASA1P20936 1047 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 NF2P35240 595 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 LIFRP42702 1097 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 FGD1P98174 961 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 TFAP4Q01664 338 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 BECN1Q14457 450 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 EAPPQ56P03 285 aaPredicted RBP12.57□□□□□ -0.4
RTF1-202ENST00000462276 RRP12Q5JTH9 1297 aaKnown RBP12.57□□□□□ -0.4
RTF1-202ENST00000462276 DGKHQ86XP1 1220 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 DYNLL2Q96FJ2 89 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 AGXT2Q9BYV1 514 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 UPF3BQ9BZI7 483 aaKnown RBP12.57□□□□□ -0.4
RTF1-202ENST00000462276 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.57□□□□□ -0.4
RTF1-202ENST00000462276 ASTN2O75129 1339 aaPredicted RBP12.57□□□□□ -0.4
RTF1-202ENST00000462276 NEDD4P46934 1319 aa12.57□□□□□ -0.4
RTF1-202ENST00000462276 TSPY3P0CV98 308 aa12.56□□□□□ -0.4
RTF1-202ENST00000462276 TSPY8P0CW00 308 aa12.56□□□□□ -0.4
RTF1-202ENST00000462276 SHMT1P34896 483 aa12.56□□□□□ -0.4
RTF1-202ENST00000462276 CERKLQ49MI3 558 aaPredicted RBP12.56□□□□□ -0.4
RTF1-202ENST00000462276 ANKS1AQ92625 1134 aa12.56□□□□□ -0.4
RTF1-202ENST00000462276 ZSCAN31Q96LW9 406 aaPredicted RBP12.56□□□□□ -0.4
RTF1-202ENST00000462276 ZSCAN10Q96SZ4 725 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms