RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 TRERF1Q96PN7 1200 aa21.11■□□□□ 0.97
HPS3-204ENST00000462030 RAI14Q9P0K7 980 aa21.11■□□□□ 0.97
HPS3-204ENST00000462030 SGMS1Q86VZ5 419 aa21.1■□□□□ 0.97
HPS3-204ENST00000462030 CCDC12Q8WUD4 166 aaPredicted RBP21.1■□□□□ 0.97
HPS3-204ENST00000462030 TEX13AQ9BXU3 409 aaPredicted RBP21.1■□□□□ 0.97
HPS3-204ENST00000462030 HOOK1Q9UJC3 728 aaKnown RBP21.1■□□□□ 0.97
HPS3-204ENST00000462030 SARSP49591 514 aaKnown RBP21.1■□□□□ 0.97
HPS3-204ENST00000462030 NT5DC1Q5TFE4 455 aa21.1■□□□□ 0.97
HPS3-204ENST00000462030 ELOA2Q8IYF1 753 aaPredicted RBP21.1■□□□□ 0.97
HPS3-204ENST00000462030 MLKLQ8NB16 471 aa21.1■□□□□ 0.97
HPS3-204ENST00000462030 RABGGTAQ92696 567 aa21.1■□□□□ 0.97
HPS3-204ENST00000462030 ARFGAP3Q9NP61 516 aa21.1■□□□□ 0.97
HPS3-204ENST00000462030 WWC3Q9ULE0 1092 aa21.1■□□□□ 0.97
HPS3-204ENST00000462030 PLEKHG2Q9H7P9 1386 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 SOWAHDA6NJG2 315 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 FMNL1O95466 1100 aaPredicted RBP21.09■□□□□ 0.97
HPS3-204ENST00000462030 PTPREP23469 700 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 DIS3L2Q8IYB7 885 aaKnown RBP21.09■□□□□ 0.97
HPS3-204ENST00000462030 FUT8Q9BYC5 575 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 ZSWIM4Q9H7M6 989 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 RIPOR2Q9Y4F9 1068 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 TACC3Q9Y6A5 838 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 STK36Q9NRP7 1315 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 A0A0U1RQJ8 604 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 MMP1P03956 469 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 CSF1RP07333 972 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 ATRIPQ8WXE1 791 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 GOLGA1Q92805 767 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 SLC12A7Q9Y666 1083 aa21.09■□□□□ 0.97
HPS3-204ENST00000462030 MAP3K15Q6ZN16 1313 aa21.08■□□□□ 0.97
HPS3-204ENST00000462030 TULP2O00295 520 aa21.08■□□□□ 0.97
HPS3-204ENST00000462030 PDE6AP16499 860 aa21.08■□□□□ 0.97
HPS3-204ENST00000462030 CAPN2P17655 700 aa21.08■□□□□ 0.97
HPS3-204ENST00000462030 CTDSPL2Q05D32 466 aa21.08■□□□□ 0.97
HPS3-204ENST00000462030 NR1I3Q14994 352 aa21.08■□□□□ 0.97
HPS3-204ENST00000462030 ZSWIM5Q9P217 1185 aa21.08■□□□□ 0.97
HPS3-204ENST00000462030 PCDHB6Q9Y5E3 794 aa21.08■□□□□ 0.97
HPS3-204ENST00000462030 IFIT3O14879 490 aaKnown RBP21.07■□□□□ 0.96
HPS3-204ENST00000462030 PCCAP05165 728 aaPredicted RBP21.07■□□□□ 0.96
HPS3-204ENST00000462030 GTF2E1P29083 439 aaPredicted RBP21.07■□□□□ 0.96
HPS3-204ENST00000462030 UBE3CQ15386 1083 aa21.07■□□□□ 0.96
HPS3-204ENST00000462030 LDHAL6AQ6ZMR3 332 aa21.07■□□□□ 0.96
HPS3-204ENST00000462030 USP49Q70CQ1 688 aa21.07■□□□□ 0.96
HPS3-204ENST00000462030 NUTM2AQ8IVF1 878 aaPredicted RBP21.07■□□□□ 0.96
HPS3-204ENST00000462030 DACH1Q9UI36 760 aa21.07■□□□□ 0.96
HPS3-204ENST00000462030 CHD4Q14839 1912 aa21.07■□□□□ 0.96
HPS3-204ENST00000462030 TEX33O43247 280 aa21.07■□□□□ 0.96
HPS3-204ENST00000462030 BBXQ8WY36 941 aaPredicted RBP21.07■□□□□ 0.96
HPS3-204ENST00000462030 EPB41L4AQ9HCS5 686 aaPredicted RBP21.07■□□□□ 0.96
HPS3-204ENST00000462030 LZTFL1Q9NQ48 299 aa21.07■□□□□ 0.96
HPS3-204ENST00000462030 PAPPAQ13219 1627 aa21.07■□□□□ 0.96
HPS3-204ENST00000462030 ACTN4O43707 911 aaKnown RBP21.06■□□□□ 0.96
HPS3-204ENST00000462030 GYS2P54840 703 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 NR5A1Q13285 461 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 CCDC82Q8N4S0 544 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 PLA2G12BQ9BX93 195 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 GREM2Q9H772 168 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 A0A1B0GTH6 734 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 TCRBV5S4A2TA0A5A2 114 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 IFNAR1P17181 557 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 ATP2B1P20020 1258 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 LIFRP42702 1097 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 RAD9BQ6WBX8 426 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 CMTR1Q8N1G2 835 aaKnown RBP21.06■□□□□ 0.96
HPS3-204ENST00000462030 STRBPQ96SI9 672 aaKnown RBP21.06■□□□□ 0.96
HPS3-204ENST00000462030 LRP6O75581 1613 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 PCDH11XQ9BZA7 1347 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 PCDH11YQ9BZA8 1340 aa21.06■□□□□ 0.96
HPS3-204ENST00000462030 AKR1B15C9JRZ8 316 aaPredicted RBP21.05■□□□□ 0.96
HPS3-204ENST00000462030 CCDC175P0C221 793 aa21.05■□□□□ 0.96
HPS3-204ENST00000462030 ITGA6P23229 1130 aa21.05■□□□□ 0.96
HPS3-204ENST00000462030 TXLNAP40222 546 aa21.05■□□□□ 0.96
HPS3-204ENST00000462030 PHKA1P46020 1223 aa21.05■□□□□ 0.96
HPS3-204ENST00000462030 PLCD1P51178 756 aa21.05■□□□□ 0.96
HPS3-204ENST00000462030 TTF1Q15361 905 aaPredicted RBP21.05■□□□□ 0.96
HPS3-204ENST00000462030 SAFBQ15424 915 aaKnown RBP eCLIP21.05■□□□□ 0.96
HPS3-204ENST00000462030 LONRF2Q1L5Z9 754 aa21.05■□□□□ 0.96
HPS3-204ENST00000462030 TXLNBQ8N3L3 684 aa21.05■□□□□ 0.96
HPS3-204ENST00000462030 ZCRB1Q8TBF4 217 aaKnown RBP21.05■□□□□ 0.96
HPS3-204ENST00000462030 AIDAQ96BJ3 306 aa21.05■□□□□ 0.96
HPS3-204ENST00000462030 APTXQ7Z2E3 356 aaKnown RBP21.05■□□□□ 0.96
HPS3-204ENST00000462030 ERVV-2B6SEH9 535 aa21.04■□□□□ 0.96
HPS3-204ENST00000462030 H3BQF6 201 aa21.04■□□□□ 0.96
HPS3-204ENST00000462030 TRIML1Q8N9V2 468 aa21.04■□□□□ 0.96
HPS3-204ENST00000462030 ZBTB38Q8NAP3 1195 aaPredicted RBP21.04■□□□□ 0.96
HPS3-204ENST00000462030 TTLL11Q8NHH1 800 aa21.04■□□□□ 0.96
HPS3-204ENST00000462030 ZKSCAN3Q9BRR0 538 aa21.04■□□□□ 0.96
HPS3-204ENST00000462030 CNNM1Q9NRU3 951 aa21.04■□□□□ 0.96
HPS3-204ENST00000462030 RILPL1Q5EBL4 403 aa21.04■□□□□ 0.96
HPS3-204ENST00000462030 VGLL2Q8N8G2 317 aa21.04■□□□□ 0.96
HPS3-204ENST00000462030 OXER1Q8TDS5 423 aa21.04■□□□□ 0.96
HPS3-204ENST00000462030 CPLX3Q8WVH0 158 aa21.04■□□□□ 0.96
HPS3-204ENST00000462030 PUF60Q9UHX1 559 aaKnown RBP21.04■□□□□ 0.96
HPS3-204ENST00000462030 ADGRG1Q9Y653 693 aa21.04■□□□□ 0.96
HPS3-204ENST00000462030 CHMP4BP1P59074 171 aa21.03■□□□□ 0.96
HPS3-204ENST00000462030 RBL2Q08999 1139 aa21.03■□□□□ 0.96
HPS3-204ENST00000462030 RAD51AP2Q09MP3 1159 aa21.03■□□□□ 0.96
HPS3-204ENST00000462030 TRIM28Q13263 835 aaKnown RBP21.03■□□□□ 0.96
HPS3-204ENST00000462030 WASF1Q92558 559 aa21.03■□□□□ 0.96
HPS3-204ENST00000462030 ZNF512BQ96KM6 892 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms