RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 SLF2Q8IX21 1173 aa18.92■□□□□ 0.62
SF3A3-203ENST00000461869 SMCR8Q8TEV9 937 aaPredicted RBP18.92■□□□□ 0.62
SF3A3-203ENST00000461869 ABCF2Q9UG63 623 aa18.92■□□□□ 0.62
SF3A3-203ENST00000461869 PA2G4Q9UQ80 394 aaKnown RBP18.92■□□□□ 0.62
SF3A3-203ENST00000461869 TNPO2O14787 897 aaKnown RBP18.91■□□□□ 0.62
SF3A3-203ENST00000461869 ZBTB22O15209 634 aa18.91■□□□□ 0.62
SF3A3-203ENST00000461869 CTNND1O60716 968 aaKnown RBP18.91■□□□□ 0.62
SF3A3-203ENST00000461869 SLURP2P0DP57 97 aa18.91■□□□□ 0.62
SF3A3-203ENST00000461869 ELNP15502 786 aa18.91■□□□□ 0.62
SF3A3-203ENST00000461869 PICALMQ13492 652 aa18.91■□□□□ 0.62
SF3A3-203ENST00000461869 FAM163AQ96GL9 167 aaPredicted RBP18.91■□□□□ 0.62
SF3A3-203ENST00000461869 TRIM75PA6NK02 468 aa18.9■□□□□ 0.62
SF3A3-203ENST00000461869 RAB11FIP3O75154 756 aa18.9■□□□□ 0.62
SF3A3-203ENST00000461869 INHAP05111 366 aa18.9■□□□□ 0.62
SF3A3-203ENST00000461869 BTDP43251 543 aa18.9■□□□□ 0.62
SF3A3-203ENST00000461869 TIMM10P62072 90 aa18.9■□□□□ 0.62
SF3A3-203ENST00000461869 RASGRF1Q13972 1273 aa18.9■□□□□ 0.62
SF3A3-203ENST00000461869 CHD1LQ86WJ1 897 aa18.9■□□□□ 0.62
SF3A3-203ENST00000461869 PXYLP1Q8TE99 480 aa18.9■□□□□ 0.62
SF3A3-203ENST00000461869 DDX4Q9NQI0 724 aaKnown RBP18.9■□□□□ 0.62
SF3A3-203ENST00000461869 RFX7Q2KHR2 1363 aa18.9■□□□□ 0.62
SF3A3-203ENST00000461869 DOCK2Q92608 1830 aa18.89■□□□□ 0.61
SF3A3-203ENST00000461869 TFRCP02786 760 aaKnown RBP18.89■□□□□ 0.61
SF3A3-203ENST00000461869 IRF5Q13568 498 aa18.89■□□□□ 0.61
SF3A3-203ENST00000461869 ANKRD45Q5TZF3 282 aa18.89■□□□□ 0.61
SF3A3-203ENST00000461869 SPTY2D1Q68D10 685 aaPredicted RBP18.89■□□□□ 0.61
SF3A3-203ENST00000461869 COPRSQ9NQ92 184 aa18.89■□□□□ 0.61
SF3A3-203ENST00000461869 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.89■□□□□ 0.61
SF3A3-203ENST00000461869 AGTPBP1Q9UPW5 1226 aa18.89■□□□□ 0.61
SF3A3-203ENST00000461869 MGAMO43451 1857 aa18.88■□□□□ 0.61
SF3A3-203ENST00000461869 CCDC84Q86UT8 332 aaPredicted RBP18.88■□□□□ 0.61
SF3A3-203ENST00000461869 ERC1Q8IUD2 1116 aa18.88■□□□□ 0.61
SF3A3-203ENST00000461869 ANKRD13CQ8N6S4 541 aa18.88■□□□□ 0.61
SF3A3-203ENST00000461869 DEFB118Q96PH6 123 aa18.88■□□□□ 0.61
SF3A3-203ENST00000461869 PRO3102Q9H379 93 aa18.88■□□□□ 0.61
SF3A3-203ENST00000461869 TAOK2Q9UL54 1235 aa18.88■□□□□ 0.61
SF3A3-203ENST00000461869 PDS5AQ29RF7 1337 aaKnown RBP18.88■□□□□ 0.61
SF3A3-203ENST00000461869 MYH2Q9UKX2 1941 aa18.88■□□□□ 0.61
SF3A3-203ENST00000461869 MROH7-TTC4A0A0A0MT08 1334 aa18.87■□□□□ 0.61
SF3A3-203ENST00000461869 EVI5O60447 810 aa18.87■□□□□ 0.61
SF3A3-203ENST00000461869 CAPN2P17655 700 aa18.87■□□□□ 0.61
SF3A3-203ENST00000461869 ERICH6Q7L0X2 663 aa18.87■□□□□ 0.61
SF3A3-203ENST00000461869 COA7Q96BR5 231 aa18.87■□□□□ 0.61
SF3A3-203ENST00000461869 LRRCC1Q9C099 1032 aa18.87■□□□□ 0.61
SF3A3-203ENST00000461869 NOP58Q9Y2X3 529 aaKnown RBP18.87■□□□□ 0.61
SF3A3-203ENST00000461869 GPR75-ASB3A0A0A6YYF3 556 aa18.86■□□□□ 0.61
SF3A3-203ENST00000461869 TBC1D12O60347 775 aa18.86■□□□□ 0.61
SF3A3-203ENST00000461869 SURF6O75683 361 aaKnown RBP18.86■□□□□ 0.61
SF3A3-203ENST00000461869 MECOMQ03112 1051 aa18.86■□□□□ 0.61
SF3A3-203ENST00000461869 TREML2Q5T2D2 321 aa18.86■□□□□ 0.61
SF3A3-203ENST00000461869 XAGE2Q96GT9 111 aa18.86■□□□□ 0.61
SF3A3-203ENST00000461869 LNPKQ9C0E8 428 aa18.86■□□□□ 0.61
SF3A3-203ENST00000461869 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.86■□□□□ 0.61
SF3A3-203ENST00000461869 PNMA3Q9UL41 463 aa18.86■□□□□ 0.61
SF3A3-203ENST00000461869 EXOC6BQ9Y2D4 811 aa18.86■□□□□ 0.61
SF3A3-203ENST00000461869 AKAP2Q9Y2D5 859 aa18.86■□□□□ 0.61
SF3A3-203ENST00000461869 A0A1B0GUL7 405 aa18.85■□□□□ 0.61
SF3A3-203ENST00000461869 RHBDL3P58872 404 aa18.85■□□□□ 0.61
SF3A3-203ENST00000461869 KIF1BPQ96EK5 621 aa18.85■□□□□ 0.61
SF3A3-203ENST00000461869 PAK6Q9NQU5 681 aaPredicted RBP18.85■□□□□ 0.61
SF3A3-203ENST00000461869 DOCK1Q14185 1865 aa18.84■□□□□ 0.61
SF3A3-203ENST00000461869 FAM196BA6NMK8 535 aa18.84■□□□□ 0.61
SF3A3-203ENST00000461869 NPM3O75607 178 aaKnown RBP18.84■□□□□ 0.61
SF3A3-203ENST00000461869 TFCP2Q12800 502 aa18.84■□□□□ 0.61
SF3A3-203ENST00000461869 SPP2Q13103 211 aa18.84■□□□□ 0.61
SF3A3-203ENST00000461869 OS9Q13438 667 aaPredicted RBP18.84■□□□□ 0.61
SF3A3-203ENST00000461869 FAM110CQ1W6H9 321 aa18.84■□□□□ 0.61
SF3A3-203ENST00000461869 PROCA1Q8NCQ7 364 aaPredicted RBP18.84■□□□□ 0.61
SF3A3-203ENST00000461869 CRISPLD2Q9H0B8 497 aa18.84■□□□□ 0.61
SF3A3-203ENST00000461869 OSBPL5Q9H0X9 879 aaPredicted RBP18.84■□□□□ 0.61
SF3A3-203ENST00000461869 G3BP1Q13283 466 aaKnown RBP eCLIP18.83■□□□□ 0.6
SF3A3-203ENST00000461869 ZNF280CQ8ND82 737 aa18.83■□□□□ 0.6
SF3A3-203ENST00000461869 ZNF384Q8TF68 577 aa18.83■□□□□ 0.6
SF3A3-203ENST00000461869 PAWRQ96IZ0 340 aaKnown RBP18.83■□□□□ 0.6
SF3A3-203ENST00000461869 NEUROD6Q96NK8 337 aa18.83■□□□□ 0.6
SF3A3-203ENST00000461869 PHIPQ8WWQ0 1821 aa18.83■□□□□ 0.6
SF3A3-203ENST00000461869 TRIOBPQ9H2D6 2365 aa18.83■□□□□ 0.6
SF3A3-203ENST00000461869 A0A1W2PPC1 479 aa18.82■□□□□ 0.6
SF3A3-203ENST00000461869 LDHCP07864 332 aa18.82■□□□□ 0.6
SF3A3-203ENST00000461869 GCLCP48506 637 aaPredicted RBP18.82■□□□□ 0.6
SF3A3-203ENST00000461869 GSTO1P78417 241 aa18.82■□□□□ 0.6
SF3A3-203ENST00000461869 TBC1D2Q9BYX2 928 aa18.82■□□□□ 0.6
SF3A3-203ENST00000461869 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.82■□□□□ 0.6
SF3A3-203ENST00000461869 HMG20BQ9P0W2 317 aa18.82■□□□□ 0.6
SF3A3-203ENST00000461869 PTPRFP10586 1907 aa18.82■□□□□ 0.6
SF3A3-203ENST00000461869 APBB1O00213 710 aa18.81■□□□□ 0.6
SF3A3-203ENST00000461869 MAP4K4O95819 1239 aaPredicted RBP18.81■□□□□ 0.6
SF3A3-203ENST00000461869 HMGCS2P54868 508 aa18.81■□□□□ 0.6
SF3A3-203ENST00000461869 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.6
SF3A3-203ENST00000461869 GORABQ5T7V8 394 aa18.81■□□□□ 0.6
SF3A3-203ENST00000461869 TBC1D9Q6ZT07 1266 aa18.81■□□□□ 0.6
SF3A3-203ENST00000461869 NECAB2Q7Z6G3 386 aa18.81■□□□□ 0.6
SF3A3-203ENST00000461869 SPATA5Q8NB90 893 aa18.81■□□□□ 0.6
SF3A3-203ENST00000461869 NSUN4Q96CB9 384 aaKnown RBP18.81■□□□□ 0.6
SF3A3-203ENST00000461869 STAP2Q9UGK3 403 aa18.81■□□□□ 0.6
SF3A3-203ENST00000461869 PDE4AP27815 886 aa18.8■□□□□ 0.6
SF3A3-203ENST00000461869 CAP2P40123 477 aa18.8■□□□□ 0.6
SF3A3-203ENST00000461869 RHPN1Q8TCX5 695 aa18.8■□□□□ 0.6
SF3A3-203ENST00000461869 DIS3LQ8TF46 1054 aaKnown RBP18.8■□□□□ 0.6
SF3A3-203ENST00000461869 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms