RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 FAM83CQ9BQN1 747 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 TRIM56Q9BRZ2 755 aaKnown RBP4.66□□□□□ -1.66
HDAC6-212ENST00000461608 KRT82Q9NSB4 513 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 SHROOM4Q9ULL8 1493 aa4.65□□□□□ -1.66
HDAC6-212ENST00000461608 FARP2O94887 1054 aaPredicted RBP4.65□□□□□ -1.67
HDAC6-212ENST00000461608 PF4P02776 101 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 GSTP1P09211 210 aaKnown RBP4.65□□□□□ -1.67
HDAC6-212ENST00000461608 IMPDH2P12268 514 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 GARTP22102 1010 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 ARNTP27540 789 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 C19orf57Q0VDD7 668 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 CPSF6Q16630 551 aaKnown RBP eCLIP4.65□□□□□ -1.67
HDAC6-212ENST00000461608 DUOXA2Q1HG44 320 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 FBXL19Q6PCT2 694 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 BEND4Q6ZU67 534 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 MCF2L2Q86YR7 1114 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 SHISA5Q8N114 240 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 OR6P1Q8NGX9 317 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 CORO1BQ9BR76 489 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 PPP1R1BQ9UD71 204 aaPredicted RBP4.65□□□□□ -1.67
HDAC6-212ENST00000461608 HIF3AQ9Y2N7 669 aa4.65□□□□□ -1.67
HDAC6-212ENST00000461608 PAGE1O75459 146 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 BMP3P12645 472 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 BMP6P22004 513 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 CANXP27824 592 aaKnown RBP4.64□□□□□ -1.67
HDAC6-212ENST00000461608 RXRBP28702 533 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 GTF2F1P35269 517 aaKnown RBP eCLIP4.64□□□□□ -1.67
HDAC6-212ENST00000461608 ZNF165P49910 485 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 NLRP12P59046 1061 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 RPL6Q02878 288 aaKnown RBP4.64□□□□□ -1.67
HDAC6-212ENST00000461608 FAM160A1Q05DH4 1040 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 ZNF252P-AS1Q0IIN9 211 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 ZNF423Q2M1K9 1284 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 TNNI3KQ59H18 835 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 FDX2Q6P4F2 183 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 SLITRK4Q8IW52 837 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 CKAP2LQ8IYA6 745 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 NKD1Q969G9 470 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 METTL22Q9BUU2 404 aaPredicted RBP4.64□□□□□ -1.67
HDAC6-212ENST00000461608 CBX8Q9HC52 389 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 TLR6Q9Y2C9 796 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 TACC3Q9Y6A5 838 aa4.64□□□□□ -1.67
HDAC6-212ENST00000461608 CILPO75339 1184 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 DLGAP3O95886 979 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 HOXA10P31260 410 aaPredicted RBP4.63□□□□□ -1.67
HDAC6-212ENST00000461608 NASPP49321 788 aaPredicted RBP4.63□□□□□ -1.67
HDAC6-212ENST00000461608 GSTM4Q03013 218 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 RBL2Q08999 1139 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 ANKRD34AQ69YU3 496 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 REC114Q7Z4M0 266 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 PDZD3Q86UT5 571 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 FAM20CQ8IXL6 584 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 REXO1Q8N1G1 1221 aaKnown RBP4.63□□□□□ -1.67
HDAC6-212ENST00000461608 FLCNQ8NFG4 579 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 GAL3ST3Q96A11 431 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 EAF1Q96JC9 268 aaPredicted RBP4.63□□□□□ -1.67
HDAC6-212ENST00000461608 CACNA2D2Q9NY47 1150 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 CCDC39Q9UFE4 941 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 SYNGAP1Q96PV0 1343 aa4.63□□□□□ -1.67
HDAC6-212ENST00000461608 FAM221AA4D161 298 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 F6X3S4 739 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 SOX1O00570 391 aaPredicted RBP4.62□□□□□ -1.67
HDAC6-212ENST00000461608 F13A1P00488 732 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 MLECQ14165 292 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 POU4F3Q15319 338 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.62□□□□□ -1.67
HDAC6-212ENST00000461608 NOP9Q86U38 636 aaKnown RBP4.62□□□□□ -1.67
HDAC6-212ENST00000461608 SLC7A3Q8WY07 619 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 ACSBG1Q96GR2 724 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 MFSD14AQ96MC6 490 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 NRSN2Q9GZP1 204 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 UBP1Q9NZI7 540 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 EFR3BQ9Y2G0 817 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 SNCAIPQ9Y6H5 919 aa4.62□□□□□ -1.67
HDAC6-212ENST00000461608 FOSL1P15407 271 aa4.61□□□□□ -1.67
HDAC6-212ENST00000461608 ZNF157P51786 506 aaPredicted RBP4.61□□□□□ -1.67
HDAC6-212ENST00000461608 SEPT6Q14141 434 aa4.61□□□□□ -1.67
HDAC6-212ENST00000461608 NFE2L2Q16236 605 aa4.61□□□□□ -1.67
HDAC6-212ENST00000461608 ZNF648Q5T619 568 aaPredicted RBP4.61□□□□□ -1.67
HDAC6-212ENST00000461608 MAP1SQ66K74 1059 aaPredicted RBP4.61□□□□□ -1.67
HDAC6-212ENST00000461608 BNC2Q6ZN30 1099 aaPredicted RBP4.61□□□□□ -1.67
HDAC6-212ENST00000461608 NFXL1Q6ZNB6 911 aa4.61□□□□□ -1.67
HDAC6-212ENST00000461608 FBXL6Q8N531 539 aa4.61□□□□□ -1.67
HDAC6-212ENST00000461608 CPLX3Q8WVH0 158 aa4.61□□□□□ -1.67
HDAC6-212ENST00000461608 SRRTQ9BXP5 876 aaKnown RBP4.61□□□□□ -1.67
HDAC6-212ENST00000461608 GINM1Q9NU53 330 aa4.61□□□□□ -1.67
HDAC6-212ENST00000461608 BSDC1Q9NW68 430 aaPredicted RBP4.61□□□□□ -1.67
HDAC6-212ENST00000461608 R3HCC1Q9Y3T6 440 aaKnown RBP4.61□□□□□ -1.67
HDAC6-212ENST00000461608 U2SURPO15042 1029 aaKnown RBP4.6□□□□□ -1.67
HDAC6-212ENST00000461608 CYP26A1O43174 497 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 CRKP46108 304 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 PDE4BQ07343 736 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 PDE3AQ14432 1141 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 ZNF124Q15973 351 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 LRRFIP1Q32MZ4 808 aaKnown RBP4.6□□□□□ -1.67
HDAC6-212ENST00000461608 SEZ6Q53EL9 994 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 SGO2Q562F6 1265 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 DPH6Q7L8W6 267 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms