RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 TRPA1O75762 1119 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 MBD4O95243 580 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 SLURP2P0DP57 97 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 LBX1P52954 281 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 FOXP4Q8IVH2 680 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 SCYL3Q8IZE3 742 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 ARMT1Q9H993 441 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 RNF186Q9NXI6 227 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 SAGE1Q9NXZ1 904 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 HERC5Q9UII4 1024 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 SIPA1L1O43166 1804 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 CTNND1O60716 968 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 CHGBP05060 677 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 POLR3DP05423 398 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 LAMB1P07942 1786 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 GTF2A2P52657 109 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 PPATQ06203 517 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 PPIL2Q13356 520 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 DOCK1Q14185 1865 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 SLC4A8Q2Y0W8 1093 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 OTUD7BQ6GQQ9 843 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 TTC6Q86TZ1 520 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 SDR42E1Q8WUS8 393 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 APPBP2Q92624 585 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 PCNTO95613 3336 aa12.75□□□□□ -0.37
TRAPPC12-213ENST00000461577 ALDH1A1P00352 501 aa12.74□□□□□ -0.37
TRAPPC12-213ENST00000461577 EVI5LQ96CN4 794 aa12.74□□□□□ -0.37
TRAPPC12-213ENST00000461577 PUS7LQ9H0K6 701 aaKnown RBP12.74□□□□□ -0.37
TRAPPC12-213ENST00000461577 PRDM10Q9NQV6 1147 aa12.74□□□□□ -0.37
TRAPPC12-213ENST00000461577 ATP8A2Q9NTI2 1148 aa12.74□□□□□ -0.37
TRAPPC12-213ENST00000461577 MCM9Q9NXL9 1143 aa12.74□□□□□ -0.37
TRAPPC12-213ENST00000461577 SLC4A4Q9Y6R1 1079 aa12.74□□□□□ -0.37
TRAPPC12-213ENST00000461577 ATAD5Q96QE3 1844 aa12.74□□□□□ -0.37
TRAPPC12-213ENST00000461577 CCL15-CCL14A0A0B4J2E2 113 aa12.73□□□□□ -0.37
TRAPPC12-213ENST00000461577 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
TRAPPC12-213ENST00000461577 IRF6O14896 467 aa12.73□□□□□ -0.37
TRAPPC12-213ENST00000461577 SNAPC2Q13487 334 aa12.73□□□□□ -0.37
TRAPPC12-213ENST00000461577 CCL15Q16663 113 aa12.73□□□□□ -0.37
TRAPPC12-213ENST00000461577 IFNL1Q8IU54 200 aa12.73□□□□□ -0.37
TRAPPC12-213ENST00000461577 AMOTL1Q8IY63 956 aa12.73□□□□□ -0.37
TRAPPC12-213ENST00000461577 BAZ2AQ9UIF9 1905 aaKnown RBP12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 TESPA1A2RU30 521 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 PRKAB2O43741 272 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 NEFLP07196 543 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 CETPP11597 493 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 PTPRAP18433 802 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 CAP2P40123 477 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 METTL16Q86W50 562 aaKnown RBP12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 PLEKHM2Q8IWE5 1019 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 OSBP2Q969R2 916 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 RILPL2Q969X0 211 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 EHD4Q9H223 541 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 OSBPL3Q9H4L5 887 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 DCP1AQ9NPI6 582 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 SERPINB13Q9UIV8 391 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 ZHX2Q9Y6X8 837 aa12.72□□□□□ -0.37
TRAPPC12-213ENST00000461577 DDX60LQ5H9U9 1706 aaKnown RBP12.71□□□□□ -0.37
TRAPPC12-213ENST00000461577 M0R2C6 588 aa12.71□□□□□ -0.37
TRAPPC12-213ENST00000461577 IGF2BP3O00425 579 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRAPPC12-213ENST00000461577 GPAA1O43292 621 aa12.71□□□□□ -0.37
TRAPPC12-213ENST00000461577 TBC1D8O95759 1140 aa12.71□□□□□ -0.37
TRAPPC12-213ENST00000461577 PLCD1P51178 756 aa12.71□□□□□ -0.37
TRAPPC12-213ENST00000461577 BRI3BPQ8WY22 251 aa12.71□□□□□ -0.37
TRAPPC12-213ENST00000461577 STRBPQ96SI9 672 aaKnown RBP12.71□□□□□ -0.37
TRAPPC12-213ENST00000461577 DNAJC18Q9H819 358 aa12.71□□□□□ -0.37
TRAPPC12-213ENST00000461577 PHIPQ8WWQ0 1821 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 USP17L5A8MUK1 530 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 CXCL11O14625 94 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 GDF11O95390 407 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 GNAT2P19087 354 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 RRP1BQ14684 758 aaKnown RBP12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 ZMYM1Q5SVZ6 1142 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 PTPN18Q99952 460 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 TBC1D2Q9BYX2 928 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 AS3MTQ9HBK9 375 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 GINM1Q9NU53 330 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 KCNH4Q9UQ05 1017 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 AFG3L2Q9Y4W6 797 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 CASP8AP2Q9UKL3 1982 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 MYH8P13535 1937 aa12.7□□□□□ -0.38
TRAPPC12-213ENST00000461577 TRIM75PA6NK02 468 aa12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 APPP05067 770 aa12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 ASNSP08243 561 aa12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 CYP2D6P10635 497 aa12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 CERKLQ49MI3 558 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 COL13A1Q5TAT6 717 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 TATDN1Q6P1N9 297 aa12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 CCDC84Q86UT8 332 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 TICAM2Q86XR7 235 aa12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 SEC62Q99442 399 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 SWAP70Q9UH65 585 aa12.69□□□□□ -0.38
TRAPPC12-213ENST00000461577 GSG1L2A8MUP6 293 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 PATL2C9JE40 543 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms