RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 DNAJC18Q9H819 358 aa28.74■■■□□ 2.19
LMBR1-214ENST00000461469 ZCCHC17Q9NP64 241 aaKnown RBP28.74■■■□□ 2.19
LMBR1-214ENST00000461469 SMARCA5O60264 1052 aaPredicted RBP28.73■■■□□ 2.19
LMBR1-214ENST00000461469 TLR2O60603 784 aa28.73■■■□□ 2.19
LMBR1-214ENST00000461469 IFIT2P09913 472 aaKnown RBP28.73■■■□□ 2.19
LMBR1-214ENST00000461469 ANKRD23Q86SG2 305 aa28.73■■■□□ 2.19
LMBR1-214ENST00000461469 PICK1Q9NRD5 415 aa28.73■■■□□ 2.19
LMBR1-214ENST00000461469 ADGRA2Q96PE1 1338 aa28.72■■■□□ 2.19
LMBR1-214ENST00000461469 PDHXO00330 501 aa28.72■■■□□ 2.19
LMBR1-214ENST00000461469 CXCL11O14625 94 aa28.72■■■□□ 2.19
LMBR1-214ENST00000461469 IGSF3O75054 1194 aa28.72■■■□□ 2.19
LMBR1-214ENST00000461469 PLCG2P16885 1265 aa28.72■■■□□ 2.19
LMBR1-214ENST00000461469 JAG1P78504 1218 aa28.72■■■□□ 2.19
LMBR1-214ENST00000461469 ARHGAP39Q9C0H5 1083 aa28.72■■■□□ 2.19
LMBR1-214ENST00000461469 SAP30BPQ9UHR5 308 aaKnown RBP28.72■■■□□ 2.19
LMBR1-214ENST00000461469 PALD1Q9ULE6 856 aa28.72■■■□□ 2.19
LMBR1-214ENST00000461469 A0A0G2JLL6 359 aaPredicted RBP28.71■■■□□ 2.19
LMBR1-214ENST00000461469 SHROOM1Q2M3G4 852 aaPredicted RBP28.71■■■□□ 2.19
LMBR1-214ENST00000461469 SLC4A8Q2Y0W8 1093 aa28.71■■■□□ 2.19
LMBR1-214ENST00000461469 PRRT2Q7Z6L0 340 aaPredicted RBP28.71■■■□□ 2.19
LMBR1-214ENST00000461469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.71■■■□□ 2.19
LMBR1-214ENST00000461469 YTHDC1Q96MU7 727 aaKnown RBP28.71■■■□□ 2.19
LMBR1-214ENST00000461469 DDX60LQ5H9U9 1706 aaKnown RBP28.71■■■□□ 2.19
LMBR1-214ENST00000461469 GOLIM4O00461 696 aa28.7■■■□□ 2.18
LMBR1-214ENST00000461469 MAP3K12Q12852 859 aa28.7■■■□□ 2.18
LMBR1-214ENST00000461469 DNAJC2Q99543 621 aaKnown RBP28.7■■■□□ 2.18
LMBR1-214ENST00000461469 SLFNL1Q499Z3 407 aa28.69■■■□□ 2.18
LMBR1-214ENST00000461469 C17orf99Q6UX52 265 aa28.69■■■□□ 2.18
LMBR1-214ENST00000461469 RIOK1Q9BRS2 568 aaKnown RBP28.69■■■□□ 2.18
LMBR1-214ENST00000461469 EFCC1Q9HA90 598 aa28.69■■■□□ 2.18
LMBR1-214ENST00000461469 PI4KBQ9UBF8 816 aa28.69■■■□□ 2.18
LMBR1-214ENST00000461469 CPA4Q9UI42 421 aa28.69■■■□□ 2.18
LMBR1-214ENST00000461469 PTPN22Q9Y2R2 807 aa28.69■■■□□ 2.18
LMBR1-214ENST00000461469 TRIM75PA6NK02 468 aa28.68■■■□□ 2.18
LMBR1-214ENST00000461469 PDE6AP16499 860 aa28.68■■■□□ 2.18
LMBR1-214ENST00000461469 CTGFP29279 349 aa28.68■■■□□ 2.18
LMBR1-214ENST00000461469 CAP2P40123 477 aa28.68■■■□□ 2.18
LMBR1-214ENST00000461469 RRP1P56182 461 aaKnown RBP28.68■■■□□ 2.18
LMBR1-214ENST00000461469 METTL16Q86W50 562 aaKnown RBP28.68■■■□□ 2.18
LMBR1-214ENST00000461469 DHX36Q9H2U1 1008 aaKnown RBP28.68■■■□□ 2.18
LMBR1-214ENST00000461469 BOLA2Q9H3K6 86 aa28.68■■■□□ 2.18
LMBR1-214ENST00000461469 PCDHB15Q9Y5E8 787 aa28.68■■■□□ 2.18
LMBR1-214ENST00000461469 LOC285556D6RIA3 1793 aa28.67■■■□□ 2.18
LMBR1-214ENST00000461469 CHGBP05060 677 aa28.67■■■□□ 2.18
LMBR1-214ENST00000461469 CYP2C8P10632 490 aa28.67■■■□□ 2.18
LMBR1-214ENST00000461469 HERC5Q9UII4 1024 aaKnown RBP28.67■■■□□ 2.18
LMBR1-214ENST00000461469 NAV1Q8NEY1 1877 aa28.66■■■□□ 2.18
LMBR1-214ENST00000461469 TCRBV5S4A2TA0A5A2 114 aa28.66■■■□□ 2.18
LMBR1-214ENST00000461469 ECM2O94769 699 aaPredicted RBP28.66■■■□□ 2.18
LMBR1-214ENST00000461469 LRRCC1Q9C099 1032 aa28.66■■■□□ 2.18
LMBR1-214ENST00000461469 MYH7P12883 1935 aa28.65■■■□□ 2.18
LMBR1-214ENST00000461469 ATP5JP18859 108 aa28.65■■■□□ 2.18
LMBR1-214ENST00000461469 TTF1Q15361 905 aaPredicted RBP28.65■■■□□ 2.18
LMBR1-214ENST00000461469 SLC9C2Q5TAH2 1124 aa28.65■■■□□ 2.18
LMBR1-214ENST00000461469 GADL1Q6ZQY3 521 aa28.65■■■□□ 2.18
LMBR1-214ENST00000461469 DCTPP1Q9H773 170 aa28.65■■■□□ 2.18
LMBR1-214ENST00000461469 CENPFP49454 3210 aa28.65■■■□□ 2.18
LMBR1-214ENST00000461469 ZNF532Q9HCE3 1301 aa28.65■■■□□ 2.18
LMBR1-214ENST00000461469 LACTBP83111 547 aaPredicted RBP28.64■■■□□ 2.18
LMBR1-214ENST00000461469 EVX2Q03828 476 aa28.64■■■□□ 2.18
LMBR1-214ENST00000461469 SPP2Q13103 211 aa28.63■■■□□ 2.17
LMBR1-214ENST00000461469 TREML2Q5T2D2 321 aa28.63■■■□□ 2.17
LMBR1-214ENST00000461469 HAUS7Q99871 368 aa28.63■■■□□ 2.17
LMBR1-214ENST00000461469 PAG1Q9NWQ8 432 aa28.63■■■□□ 2.17
LMBR1-214ENST00000461469 MGAMO43451 1857 aa28.62■■■□□ 2.17
LMBR1-214ENST00000461469 USP5P45974 858 aa28.62■■■□□ 2.17
LMBR1-214ENST00000461469 MLLT1Q03111 559 aaPredicted RBP28.62■■■□□ 2.17
LMBR1-214ENST00000461469 FASTKD5Q7L8L6 764 aaKnown RBP28.62■■■□□ 2.17
LMBR1-214ENST00000461469 FOXP4Q8IVH2 680 aaPredicted RBP28.62■■■□□ 2.17
LMBR1-214ENST00000461469 GDF11O95390 407 aa28.61■■■□□ 2.17
LMBR1-214ENST00000461469 BCRP11274 1271 aa28.61■■■□□ 2.17
LMBR1-214ENST00000461469 PTCH2Q9Y6C5 1203 aa28.61■■■□□ 2.17
LMBR1-214ENST00000461469 TNRC18O15417 2968 aaPredicted RBP28.6■■■□□ 2.17
LMBR1-214ENST00000461469 MAGEB6P1A0A0J9YX57 407 aa28.6■■■□□ 2.17
LMBR1-214ENST00000461469 TMED8Q6PL24 325 aaPredicted RBP28.6■■■□□ 2.17
LMBR1-214ENST00000461469 LCORLQ8N3X6 602 aa28.6■■■□□ 2.17
LMBR1-214ENST00000461469 ZNF280CQ8ND82 737 aa28.6■■■□□ 2.17
LMBR1-214ENST00000461469 CRBNQ96SW2 442 aa28.6■■■□□ 2.17
LMBR1-214ENST00000461469 PARK7Q99497 189 aaKnown RBP28.6■■■□□ 2.17
LMBR1-214ENST00000461469 USP17L5A8MUK1 530 aa28.59■■■□□ 2.17
LMBR1-214ENST00000461469 TSHZ3Q63HK5 1081 aa28.59■■■□□ 2.17
LMBR1-214ENST00000461469 CRACR2BQ8N4Y2 399 aaPredicted RBP28.59■■■□□ 2.17
LMBR1-214ENST00000461469 HLA-DOAP06340 250 aa28.58■■■□□ 2.17
LMBR1-214ENST00000461469 ADD2P35612 726 aa28.58■■■□□ 2.17
LMBR1-214ENST00000461469 PLCD1P51178 756 aa28.58■■■□□ 2.17
LMBR1-214ENST00000461469 HMGCS2P54868 508 aa28.58■■■□□ 2.17
LMBR1-214ENST00000461469 CERS3Q8IU89 383 aa28.58■■■□□ 2.17
LMBR1-214ENST00000461469 TRIM47Q96LD4 638 aa28.58■■■□□ 2.17
LMBR1-214ENST00000461469 AGTPBP1Q9UPW5 1226 aa28.58■■■□□ 2.17
LMBR1-214ENST00000461469 BAZ2AQ9UIF9 1905 aaKnown RBP28.57■■■□□ 2.16
LMBR1-214ENST00000461469 SDR42E1Q8WUS8 393 aa28.57■■■□□ 2.16
LMBR1-214ENST00000461469 SLC45A1Q9Y2W3 748 aa28.57■■■□□ 2.16
LMBR1-214ENST00000461469 RBBP6Q7Z6E9 1792 aaKnown RBP28.56■■■□□ 2.16
LMBR1-214ENST00000461469 ARMC5Q96C12 935 aa28.56■■■□□ 2.16
LMBR1-214ENST00000461469 ARMT1Q9H993 441 aa28.56■■■□□ 2.16
LMBR1-214ENST00000461469 ZBTB21Q9ULJ3 1066 aa28.56■■■□□ 2.16
LMBR1-214ENST00000461469 PRKAB2O43741 272 aa28.55■■■□□ 2.16
LMBR1-214ENST00000461469 PSMC4P43686 418 aa28.55■■■□□ 2.16
LMBR1-214ENST00000461469 SH3D19Q5HYK7 790 aa28.55■■■□□ 2.16
LMBR1-214ENST00000461469 TATDN1Q6P1N9 297 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms