RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 GADL1Q6ZQY3 521 aa18.95■□□□□ 0.62
NUP50-213ENST00000461437 ANKRD23Q86SG2 305 aa18.95■□□□□ 0.62
NUP50-213ENST00000461437 MAGEB6Q8N7X4 407 aa18.95■□□□□ 0.62
NUP50-213ENST00000461437 PCDH10Q9P2E7 1040 aa18.95■□□□□ 0.62
NUP50-213ENST00000461437 AFG3L2Q9Y4W6 797 aa18.95■□□□□ 0.62
NUP50-213ENST00000461437 FLT1P17948 1338 aa18.95■□□□□ 0.62
NUP50-213ENST00000461437 TRIM75PA6NK02 468 aa18.94■□□□□ 0.62
NUP50-213ENST00000461437 RPAP2Q8IXW5 612 aaPredicted RBP18.94■□□□□ 0.62
NUP50-213ENST00000461437 PTCH2Q9Y6C5 1203 aa18.94■□□□□ 0.62
NUP50-213ENST00000461437 COL2A1P02458 1487 aaPredicted RBP18.94■□□□□ 0.62
NUP50-213ENST00000461437 NAV1Q8NEY1 1877 aa18.94■□□□□ 0.62
NUP50-213ENST00000461437 LOC285556D6RIA3 1793 aa18.93■□□□□ 0.62
NUP50-213ENST00000461437 DOCK3Q8IZD9 2030 aa18.93■□□□□ 0.62
NUP50-213ENST00000461437 PDE4DIPQ5VU43 2346 aa18.93■□□□□ 0.62
NUP50-213ENST00000461437 CTNND1O60716 968 aaKnown RBP18.93■□□□□ 0.62
NUP50-213ENST00000461437 NPM3O75607 178 aaKnown RBP18.93■□□□□ 0.62
NUP50-213ENST00000461437 BAG3O95817 575 aa18.93■□□□□ 0.62
NUP50-213ENST00000461437 PPP4CP60510 307 aa18.93■□□□□ 0.62
NUP50-213ENST00000461437 EDC3Q96F86 508 aaKnown RBP18.93■□□□□ 0.62
NUP50-213ENST00000461437 PALD1Q9ULE6 856 aa18.93■□□□□ 0.62
NUP50-213ENST00000461437 MYH7P12883 1935 aa18.93■□□□□ 0.62
NUP50-213ENST00000461437 ADGRA2Q96PE1 1338 aa18.93■□□□□ 0.62
NUP50-213ENST00000461437 RBBP6Q7Z6E9 1792 aaKnown RBP18.92■□□□□ 0.62
NUP50-213ENST00000461437 A0A0G2JLL6 359 aaPredicted RBP18.92■□□□□ 0.62
NUP50-213ENST00000461437 CXCL11O14625 94 aa18.92■□□□□ 0.62
NUP50-213ENST00000461437 TBC1D12O60347 775 aa18.92■□□□□ 0.62
NUP50-213ENST00000461437 MYCP01106 439 aaPredicted RBP18.92■□□□□ 0.62
NUP50-213ENST00000461437 JAG1P78504 1218 aa18.92■□□□□ 0.62
NUP50-213ENST00000461437 LACTBP83111 547 aaPredicted RBP18.92■□□□□ 0.62
NUP50-213ENST00000461437 C17orf99Q6UX52 265 aa18.92■□□□□ 0.62
NUP50-213ENST00000461437 PRRT2Q7Z6L0 340 aaPredicted RBP18.92■□□□□ 0.62
NUP50-213ENST00000461437 KIF1BPQ96EK5 621 aa18.92■□□□□ 0.62
NUP50-213ENST00000461437 DNAJC18Q9H819 358 aa18.92■□□□□ 0.62
NUP50-213ENST00000461437 ZCCHC17Q9NP64 241 aaKnown RBP18.92■□□□□ 0.62
NUP50-213ENST00000461437 BRCA2P51587 3418 aa18.92■□□□□ 0.62
NUP50-213ENST00000461437 POTEFA5A3E0 1075 aa18.91■□□□□ 0.62
NUP50-213ENST00000461437 SMARCA5O60264 1052 aaPredicted RBP18.91■□□□□ 0.62
NUP50-213ENST00000461437 HMMRO75330 724 aa18.91■□□□□ 0.62
NUP50-213ENST00000461437 MAP4K4O95819 1239 aaPredicted RBP18.91■□□□□ 0.62
NUP50-213ENST00000461437 HSP90AB4PQ58FF6 505 aa18.91■□□□□ 0.62
NUP50-213ENST00000461437 CLASRPQ8N2M8 674 aaKnown RBP18.91■□□□□ 0.62
NUP50-213ENST00000461437 DNAJC2Q99543 621 aaKnown RBP18.91■□□□□ 0.62
NUP50-213ENST00000461437 GDF11O95390 407 aa18.9■□□□□ 0.62
NUP50-213ENST00000461437 SLFNL1Q499Z3 407 aa18.9■□□□□ 0.62
NUP50-213ENST00000461437 TREML2Q5T2D2 321 aa18.9■□□□□ 0.62
NUP50-213ENST00000461437 DDX60LQ5H9U9 1706 aaKnown RBP18.9■□□□□ 0.62
NUP50-213ENST00000461437 BAZ2AQ9UIF9 1905 aaKnown RBP18.9■□□□□ 0.62
NUP50-213ENST00000461437 GOLIM4O00461 696 aa18.89■□□□□ 0.61
NUP50-213ENST00000461437 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.61
NUP50-213ENST00000461437 PLCG2P16885 1265 aa18.89■□□□□ 0.61
NUP50-213ENST00000461437 CAP2P40123 477 aa18.89■□□□□ 0.61
NUP50-213ENST00000461437 SPP2Q13103 211 aa18.89■□□□□ 0.61
NUP50-213ENST00000461437 CHGBP05060 677 aa18.88■□□□□ 0.61
NUP50-213ENST00000461437 EVX2Q03828 476 aa18.88■□□□□ 0.61
NUP50-213ENST00000461437 PDE3AQ14432 1141 aa18.88■□□□□ 0.61
NUP50-213ENST00000461437 SH3TC2Q8TF17 1288 aa18.88■□□□□ 0.61
NUP50-213ENST00000461437 TRIM47Q96LD4 638 aa18.88■□□□□ 0.61
NUP50-213ENST00000461437 PARK7Q99497 189 aaKnown RBP18.88■□□□□ 0.61
NUP50-213ENST00000461437 BOLA2Q9H3K6 86 aa18.88■□□□□ 0.61
NUP50-213ENST00000461437 PI4KBQ9UBF8 816 aa18.88■□□□□ 0.61
NUP50-213ENST00000461437 MYH8P13535 1937 aa18.87■□□□□ 0.61
NUP50-213ENST00000461437 PSMC4P43686 418 aa18.87■□□□□ 0.61
NUP50-213ENST00000461437 USP5P45974 858 aa18.87■□□□□ 0.61
NUP50-213ENST00000461437 HMGCS2P54868 508 aa18.87■□□□□ 0.61
NUP50-213ENST00000461437 MAP3K12Q12852 859 aa18.87■□□□□ 0.61
NUP50-213ENST00000461437 KIF22Q14807 665 aa18.87■□□□□ 0.61
NUP50-213ENST00000461437 FASTKD5Q7L8L6 764 aaKnown RBP18.87■□□□□ 0.61
NUP50-213ENST00000461437 CRACR2BQ8N4Y2 399 aaPredicted RBP18.87■□□□□ 0.61
NUP50-213ENST00000461437 HERC5Q9UII4 1024 aaKnown RBP18.87■□□□□ 0.61
NUP50-213ENST00000461437 RAB11FIP3O75154 756 aa18.86■□□□□ 0.61
NUP50-213ENST00000461437 FMNL1O95466 1100 aaPredicted RBP18.86■□□□□ 0.61
NUP50-213ENST00000461437 BCRP11274 1271 aa18.86■□□□□ 0.61
NUP50-213ENST00000461437 PDE6AP16499 860 aa18.86■□□□□ 0.61
NUP50-213ENST00000461437 OSBPP22059 807 aa18.86■□□□□ 0.61
NUP50-213ENST00000461437 SLC9C1Q4G0N8 1177 aa18.86■□□□□ 0.61
NUP50-213ENST00000461437 ARMC5Q96C12 935 aa18.86■□□□□ 0.61
NUP50-213ENST00000461437 YTHDC1Q96MU7 727 aaKnown RBP18.86■□□□□ 0.61
NUP50-213ENST00000461437 DHX36Q9H2U1 1008 aaKnown RBP18.86■□□□□ 0.61
NUP50-213ENST00000461437 ZNF532Q9HCE3 1301 aa18.85■□□□□ 0.61
NUP50-213ENST00000461437 ZNF280CQ8ND82 737 aa18.85■□□□□ 0.61
NUP50-213ENST00000461437 ZNF333Q96JL9 665 aa18.85■□□□□ 0.61
NUP50-213ENST00000461437 RIOK1Q9BRS2 568 aaKnown RBP18.85■□□□□ 0.61
NUP50-213ENST00000461437 TRIM34Q9BYJ4 488 aa18.85■□□□□ 0.61
NUP50-213ENST00000461437 AGTPBP1Q9UPW5 1226 aa18.85■□□□□ 0.61
NUP50-213ENST00000461437 MKI67P46013 3256 aaKnown RBP18.84■□□□□ 0.61
NUP50-213ENST00000461437 MAGEB6P1A0A0J9YX57 407 aa18.84■□□□□ 0.61
NUP50-213ENST00000461437 USP17L5A8MUK1 530 aa18.84■□□□□ 0.61
NUP50-213ENST00000461437 EN2P19622 333 aaPredicted RBP18.84■□□□□ 0.61
NUP50-213ENST00000461437 MTMR2Q13614 643 aa18.84■□□□□ 0.61
NUP50-213ENST00000461437 SLC9C2Q5TAH2 1124 aa18.84■□□□□ 0.61
NUP50-213ENST00000461437 GABRQQ9UN88 632 aa18.84■□□□□ 0.61
NUP50-213ENST00000461437 PEX10O60683 326 aa18.83■□□□□ 0.6
NUP50-213ENST00000461437 HLA-DOAP06340 250 aa18.83■□□□□ 0.6
NUP50-213ENST00000461437 ARHGEF6Q15052 776 aa18.83■□□□□ 0.6
NUP50-213ENST00000461437 FOXP4Q8IVH2 680 aaPredicted RBP18.83■□□□□ 0.6
NUP50-213ENST00000461437 LCORLQ8N3X6 602 aa18.83■□□□□ 0.6
NUP50-213ENST00000461437 SMCR8Q8TEV9 937 aaPredicted RBP18.83■□□□□ 0.6
NUP50-213ENST00000461437 CHMP4BQ9H444 224 aaKnown RBP18.83■□□□□ 0.6
NUP50-213ENST00000461437 SRRDQ9UH36 339 aa18.83■□□□□ 0.6
NUP50-213ENST00000461437 ZBTB21Q9ULJ3 1066 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms