RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 FOXP4Q8IVH2 680 aaPredicted RBP13.48□□□□□ -0.25
SSBP1-202ENST00000461433 DSCC1Q9BVC3 393 aa13.48□□□□□ -0.25
SSBP1-202ENST00000461433 EHD4Q9H223 541 aa13.48□□□□□ -0.25
SSBP1-202ENST00000461433 TMEM88BA6NKF7 163 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 PHF20L1A8MW92 1017 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 KLRG1Q96E93 195 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 HOOK2Q96ED9 719 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 DDRGK1Q96HY6 314 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 NACAP1Q9BZK3 213 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 ARPP21Q9UBL0 812 aaPredicted RBP13.47□□□□□ -0.25
SSBP1-202ENST00000461433 ZNF112Q9UJU3 913 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 ZMYM6O95789 1325 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 PPP1R12BO60237 982 aaPredicted RBP13.47□□□□□ -0.25
SSBP1-202ENST00000461433 HLA-DOAP06340 250 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 TDO2P48775 406 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 FKBP1BP68106 108 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 RRP1BQ14684 758 aaKnown RBP13.47□□□□□ -0.25
SSBP1-202ENST00000461433 LDLRAD1Q5T700 205 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 DCAF15Q66K64 600 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 SAPCD2Q86UD0 394 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 C2orf69Q8N8R5 385 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 DYNLL2Q96FJ2 89 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 LSG1Q9H089 658 aaKnown RBP13.47□□□□□ -0.25
SSBP1-202ENST00000461433 NAPBQ9H115 298 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 HERC5Q9UII4 1024 aaKnown RBP13.47□□□□□ -0.25
SSBP1-202ENST00000461433 SERPINB13Q9UIV8 391 aa13.47□□□□□ -0.25
SSBP1-202ENST00000461433 ANGEL1Q9UNK9 670 aaKnown RBP13.47□□□□□ -0.25
SSBP1-202ENST00000461433 LAMA4Q16363 1823 aa13.46□□□□□ -0.25
SSBP1-202ENST00000461433 MINDY4BA8MYZ0 360 aa13.46□□□□□ -0.26
SSBP1-202ENST00000461433 UBE2Q2LH0YL09 131 aa13.46□□□□□ -0.26
SSBP1-202ENST00000461433 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.26
SSBP1-202ENST00000461433 MAP4K1Q92918 833 aa13.46□□□□□ -0.26
SSBP1-202ENST00000461433 ZNF341Q9BYN7 854 aa13.46□□□□□ -0.26
SSBP1-202ENST00000461433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.46□□□□□ -0.26
SSBP1-202ENST00000461433 TLL2Q9Y6L7 1015 aa13.46□□□□□ -0.26
SSBP1-202ENST00000461433 ROBO3Q96MS0 1386 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 SHMT1P34896 483 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 PPARAQ07869 468 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 TATDN1Q6P1N9 297 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 CASC1Q6TDU7 716 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-202ENST00000461433 ARMC9Q7Z3E5 817 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 SLC44A5Q8NCS7 719 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 NBPF3Q9H094 633 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 TACC3Q9Y6A5 838 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 ATAD5Q96QE3 1844 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 MYH8P13535 1937 aa13.45□□□□□ -0.26
SSBP1-202ENST00000461433 INPP5BP32019 993 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 JAG1P78504 1218 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 TTLL12Q14166 644 aaPredicted RBP13.44□□□□□ -0.26
SSBP1-202ENST00000461433 C16orf86Q6ZW13 317 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 CRACR2BQ8N4Y2 399 aaPredicted RBP13.44□□□□□ -0.26
SSBP1-202ENST00000461433 ZKSCAN4Q969J2 545 aaPredicted RBP13.44□□□□□ -0.26
SSBP1-202ENST00000461433 WRNIP1Q96S55 665 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 ANAPC4Q9UJX5 808 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 DOCK1Q14185 1865 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 HSPA6P17066 643 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 IREB2P48200 963 aaKnown RBP13.44□□□□□ -0.26
SSBP1-202ENST00000461433 CDK8P49336 464 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 MAP3K9P80192 1104 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 HTRA3P83110 453 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 AMOTL1Q8IY63 956 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 CLMNQ96JQ2 1002 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
SSBP1-202ENST00000461433 UNCXA6NJT0 531 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 CAP2P40123 477 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 HUNKP57058 714 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 HAND2P61296 217 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 CTDSPL2Q05D32 466 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 VGLL4Q14135 290 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 SHROOM1Q2M3G4 852 aaPredicted RBP13.43□□□□□ -0.26
SSBP1-202ENST00000461433 POTEHQ6S545 545 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 KIAA1211Q6ZU35 1233 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 ANKRD13AQ8IZ07 590 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 STK11IPQ8N1F8 1099 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 ANO2Q9NQ90 1003 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 INCENPQ9NQS7 918 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 SWAP70Q9UH65 585 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 SNCAIPQ9Y6H5 919 aa13.43□□□□□ -0.26
SSBP1-202ENST00000461433 PHIPQ8WWQ0 1821 aa13.42□□□□□ -0.26
SSBP1-202ENST00000461433 CTNND1O60716 968 aaKnown RBP13.42□□□□□ -0.26
SSBP1-202ENST00000461433 FGRP09769 529 aa13.42□□□□□ -0.26
SSBP1-202ENST00000461433 C8orf34Q49A92 452 aa13.42□□□□□ -0.26
SSBP1-202ENST00000461433 NOL9Q5SY16 702 aaKnown RBP13.42□□□□□ -0.26
SSBP1-202ENST00000461433 HHIPL1Q96JK4 782 aa13.42□□□□□ -0.26
SSBP1-202ENST00000461433 CTNNA3Q9UI47 895 aa13.42□□□□□ -0.26
SSBP1-202ENST00000461433 ABT1Q9ULW3 272 aaKnown RBP13.42□□□□□ -0.26
SSBP1-202ENST00000461433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.42□□□□□ -0.26
SSBP1-202ENST00000461433 RBM8AQ9Y5S9 174 aaKnown RBP13.42□□□□□ -0.26
SSBP1-202ENST00000461433 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
SSBP1-202ENST00000461433 RASSF10A6NK89 507 aa13.41□□□□□ -0.26
SSBP1-202ENST00000461433 ZNF213O14771 459 aa13.41□□□□□ -0.26
SSBP1-202ENST00000461433 CYP21A2P08686 494 aa13.41□□□□□ -0.26
SSBP1-202ENST00000461433 NECTIN1Q15223 517 aa13.41□□□□□ -0.26
SSBP1-202ENST00000461433 TBC1D10CQ8IV04 446 aa13.41□□□□□ -0.26
SSBP1-202ENST00000461433 TRIM34Q9BYJ4 488 aa13.41□□□□□ -0.26
SSBP1-202ENST00000461433 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.41□□□□□ -0.26
SSBP1-202ENST00000461433 TAF6LQ9Y6J9 622 aa13.41□□□□□ -0.26
SSBP1-202ENST00000461433 GREB1LQ9C091 1923 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms