RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SMC5Q8IY18 1101 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 CSGALNACT2Q8N6G5 542 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 KCNG1Q9UIX4 513 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 ZBTB24O43167 697 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-205ENST00000461221 CEP104O60308 925 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 PPP2R5DQ14738 602 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 COPS6Q7L5N1 327 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 ZCRB1Q8TBF4 217 aaKnown RBP9.98□□□□□ -0.81
BRCA1-205ENST00000461221 VPS16Q9H269 839 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 SCAF11Q99590 1463 aaKnown RBP9.98□□□□□ -0.81
BRCA1-205ENST00000461221 TPTE2Q6XPS3 522 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 TRIM6Q9C030 488 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-205ENST00000461221 RAPGEF3O95398 923 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 MAN1A1P33908 653 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 PHBP35232 272 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 INPP1P49441 399 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 RBBP5Q15291 538 aaKnown RBP9.98□□□□□ -0.81
BRCA1-205ENST00000461221 CCDC105Q8IYK2 499 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 MLKLQ8NB16 471 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 TMEM87BQ96K49 555 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 RIOK1Q9BRS2 568 aaKnown RBP9.98□□□□□ -0.81
BRCA1-205ENST00000461221 ARHGEF10LQ9HCE6 1279 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.98□□□□□ -0.81
BRCA1-205ENST00000461221 LPXNO60711 386 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 PPP2R5CQ13362 524 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 MUM1Q2TAK8 710 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 RPGRIP1Q96KN7 1286 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 GPHNQ9NQX3 736 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-205ENST00000461221 DENND2AQ9ULE3 1009 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.97□□□□□ -0.81
BRCA1-205ENST00000461221 DNAJC8O75937 253 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-205ENST00000461221 P4HA1P13674 534 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 RPS6KA1Q15418 735 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 TRIM31Q9BZY9 425 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 VPS37BQ9H9H4 285 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 CUTAO60888 179 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 GRM1Q13255 1194 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 CERS3Q8IU89 383 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 CARD10Q9BWT7 1032 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 SMIM24O75264 130 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 RFX1P22670 979 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 AKAP4Q5JQC9 854 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 SPATS2Q86XZ4 545 aaKnown RBP9.97□□□□□ -0.81
BRCA1-205ENST00000461221 PARP3Q9Y6F1 533 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 STX2P32856 288 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 MAGEA1P43355 309 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 DBN1Q16643 649 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 FAM71BQ8TC56 605 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 GRK7Q8WTQ7 553 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 SDCCAG3Q96C92 435 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 KCNH3Q9ULD8 1083 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 USTQ9Y2C2 406 aa9.97□□□□□ -0.81
BRCA1-205ENST00000461221 PFDN6O15212 129 aa9.96□□□□□ -0.81
BRCA1-205ENST00000461221 PLCB4Q15147 1175 aa9.96□□□□□ -0.81
BRCA1-205ENST00000461221 CCDC93Q567U6 631 aa9.96□□□□□ -0.81
BRCA1-205ENST00000461221 MIGA1Q8NAN2 632 aa9.96□□□□□ -0.81
BRCA1-205ENST00000461221 LLPHQ9BRT6 129 aaKnown RBP9.96□□□□□ -0.81
BRCA1-205ENST00000461221 BAG5Q9UL15 447 aa9.96□□□□□ -0.81
BRCA1-205ENST00000461221 A0A1B0GVL5 298 aa9.96□□□□□ -0.81
BRCA1-205ENST00000461221 TBC1D8O95759 1140 aa9.96□□□□□ -0.81
BRCA1-205ENST00000461221 FANCCQ00597 558 aa9.96□□□□□ -0.81
BRCA1-205ENST00000461221 PPP2R5EQ16537 467 aa9.96□□□□□ -0.81
BRCA1-205ENST00000461221 ANO1Q5XXA6 986 aa9.96□□□□□ -0.81
BRCA1-205ENST00000461221 KLHL7Q8IXQ5 586 aa9.96□□□□□ -0.81
BRCA1-205ENST00000461221 BIN2Q9UBW5 565 aaPredicted RBP9.96□□□□□ -0.81
BRCA1-205ENST00000461221 NOP56O00567 594 aaKnown RBP9.96□□□□□ -0.82
BRCA1-205ENST00000461221 POLD1P28340 1107 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 DNM2P50570 870 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 RNASE9P60153 205 aaKnown RBP9.96□□□□□ -0.82
BRCA1-205ENST00000461221 SFMBT2Q5VUG0 894 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 PEX26Q7Z412 305 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 HACE1Q8IYU2 909 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 MRPL50Q8N5N7 158 aaKnown RBP9.96□□□□□ -0.82
BRCA1-205ENST00000461221 LINS1Q8NG48 757 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 CARD6Q9BX69 1037 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 PICK1Q9NRD5 415 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 PKD2L1Q9P0L9 805 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 KLHL14Q9P2G3 628 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 TIAM1Q13009 1591 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 FAM83GA6ND36 823 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 ARHGAP6O43182 974 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 CHMP2AO43633 222 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 CCNT1O60563 726 aaKnown RBP9.96□□□□□ -0.82
BRCA1-205ENST00000461221 ZBTB17Q13105 803 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 PSPC1Q8WXF1 523 aaKnown RBP9.96□□□□□ -0.82
BRCA1-205ENST00000461221 SEPT10Q9P0V9 454 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 DMRT2Q9Y5R5 561 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 KLHL30Q0D2K2 578 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 DIXDC1Q155Q3 683 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 TMCO4Q5TGY1 634 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 DZIP3Q86Y13 1208 aaKnown RBP9.96□□□□□ -0.82
BRCA1-205ENST00000461221 RBM17Q96I25 401 aaKnown RBP9.96□□□□□ -0.82
BRCA1-205ENST00000461221 THEGQ9P2T0 379 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 ARAP1Q96P48 1450 aa9.96□□□□□ -0.82
BRCA1-205ENST00000461221 MAST3O60307 1309 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 M0QZ92 97 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 ANXA1P04083 346 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 COG7P83436 770 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 ARHGAP4P98171 946 aa9.95□□□□□ -0.82
BRCA1-205ENST00000461221 RBM26Q5T8P6 1007 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms