RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 TEX11Q8IYF3 940 aa11.82□□□□□ -0.52
CD40-203ENST00000461171 ARHGAP39Q9C0H5 1083 aa11.82□□□□□ -0.52
CD40-203ENST00000461171 AATFQ9NY61 560 aaKnown RBP eCLIP11.82□□□□□ -0.52
CD40-203ENST00000461171 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.82□□□□□ -0.52
CD40-203ENST00000461171 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
CD40-203ENST00000461171 COG6Q9Y2V7 657 aa11.82□□□□□ -0.52
CD40-203ENST00000461171 BAG3O95817 575 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 BCRP11274 1271 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 PLCG2P16885 1265 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 CTGFP29279 349 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 RRP1BQ14684 758 aaKnown RBP11.81□□□□□ -0.52
CD40-203ENST00000461171 ARHGEF6Q15052 776 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 HSP90AB4PQ58FF6 505 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 CCDC84Q86UT8 332 aaPredicted RBP11.81□□□□□ -0.52
CD40-203ENST00000461171 AACSQ86V21 672 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 METTL16Q86W50 562 aaKnown RBP11.81□□□□□ -0.52
CD40-203ENST00000461171 RPAP2Q8IXW5 612 aaPredicted RBP11.81□□□□□ -0.52
CD40-203ENST00000461171 RHPN1Q8TCX5 695 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 PARK7Q99497 189 aaKnown RBP11.81□□□□□ -0.52
CD40-203ENST00000461171 CPA4Q9UI42 421 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 HERC5Q9UII4 1024 aaKnown RBP11.81□□□□□ -0.52
CD40-203ENST00000461171 PTCH2Q9Y6C5 1203 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 LOC285556D6RIA3 1793 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 FLT1P17948 1338 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 ATAD5Q96QE3 1844 aa11.81□□□□□ -0.52
CD40-203ENST00000461171 BRCA2P51587 3418 aa11.8□□□□□ -0.52
CD40-203ENST00000461171 GNRH1P01148 92 aa11.8□□□□□ -0.52
CD40-203ENST00000461171 CYP2C8P10632 490 aa11.8□□□□□ -0.52
CD40-203ENST00000461171 TMED8Q6PL24 325 aaPredicted RBP11.8□□□□□ -0.52
CD40-203ENST00000461171 FASTKD5Q7L8L6 764 aaKnown RBP11.8□□□□□ -0.52
CD40-203ENST00000461171 ZNF333Q96JL9 665 aa11.8□□□□□ -0.52
CD40-203ENST00000461171 NOL10Q9BSC4 688 aaKnown RBP11.8□□□□□ -0.52
CD40-203ENST00000461171 DHX36Q9H2U1 1008 aaKnown RBP11.8□□□□□ -0.52
CD40-203ENST00000461171 DNAJC18Q9H819 358 aa11.8□□□□□ -0.52
CD40-203ENST00000461171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.8□□□□□ -0.52
CD40-203ENST00000461171 IL1RAPL2Q9NP60 686 aa11.8□□□□□ -0.52
CD40-203ENST00000461171 SLC45A1Q9Y2W3 748 aa11.8□□□□□ -0.52
CD40-203ENST00000461171 NDUFB9Q9Y6M9 179 aa11.8□□□□□ -0.52
CD40-203ENST00000461171 DDX60LQ5H9U9 1706 aaKnown RBP11.8□□□□□ -0.52
CD40-203ENST00000461171 POTEFA5A3E0 1075 aa11.79□□□□□ -0.52
CD40-203ENST00000461171 TRIM75PA6NK02 468 aa11.79□□□□□ -0.52
CD40-203ENST00000461171 IDH1O75874 414 aaKnown RBP11.79□□□□□ -0.52
CD40-203ENST00000461171 CAP2P40123 477 aa11.79□□□□□ -0.52
CD40-203ENST00000461171 MAPKAPK5Q8IW41 473 aa11.79□□□□□ -0.52
CD40-203ENST00000461171 TGFBRAP1Q8WUH2 860 aa11.79□□□□□ -0.52
CD40-203ENST00000461171 KIF1BPQ96EK5 621 aa11.79□□□□□ -0.52
CD40-203ENST00000461171 TRIM47Q96LD4 638 aa11.79□□□□□ -0.52
CD40-203ENST00000461171 ANTXR1Q9H6X2 564 aa11.79□□□□□ -0.52
CD40-203ENST00000461171 PI4KBQ9UBF8 816 aa11.79□□□□□ -0.52
CD40-203ENST00000461171 CEP290O15078 2479 aa11.78□□□□□ -0.52
CD40-203ENST00000461171 HMMRO75330 724 aa11.78□□□□□ -0.52
CD40-203ENST00000461171 CYP7A1P22680 504 aa11.78□□□□□ -0.52
CD40-203ENST00000461171 PRMT2P55345 433 aa11.78□□□□□ -0.52
CD40-203ENST00000461171 DYNLL1P63167 89 aaKnown RBP11.78□□□□□ -0.52
CD40-203ENST00000461171 PDE3AQ14432 1141 aa11.78□□□□□ -0.52
CD40-203ENST00000461171 KIF22Q14807 665 aa11.78□□□□□ -0.52
CD40-203ENST00000461171 C20orf194Q5TEA3 1177 aa11.78□□□□□ -0.52
CD40-203ENST00000461171 CERS3Q8IU89 383 aa11.78□□□□□ -0.52
CD40-203ENST00000461171 MAGEB6Q8N7X4 407 aa11.78□□□□□ -0.52
CD40-203ENST00000461171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.78□□□□□ -0.52
CD40-203ENST00000461171 TBC1D2Q9BYX2 928 aa11.78□□□□□ -0.52
CD40-203ENST00000461171 AGTPBP1Q9UPW5 1226 aa11.78□□□□□ -0.52
CD40-203ENST00000461171 MKI67P46013 3256 aaKnown RBP11.78□□□□□ -0.52
CD40-203ENST00000461171 PSMC4P43686 418 aa11.77□□□□□ -0.53
CD40-203ENST00000461171 JAG1P78504 1218 aa11.77□□□□□ -0.53
CD40-203ENST00000461171 SLC9C1Q4G0N8 1177 aa11.77□□□□□ -0.53
CD40-203ENST00000461171 TREML2Q5T2D2 321 aa11.77□□□□□ -0.53
CD40-203ENST00000461171 GADL1Q6ZQY3 521 aa11.77□□□□□ -0.53
CD40-203ENST00000461171 CLASRPQ8N2M8 674 aaKnown RBP11.77□□□□□ -0.53
CD40-203ENST00000461171 MIGA1Q8NAN2 632 aa11.77□□□□□ -0.53
CD40-203ENST00000461171 PROCA1Q8NCQ7 364 aaPredicted RBP11.77□□□□□ -0.53
CD40-203ENST00000461171 ZNF280CQ8ND82 737 aa11.77□□□□□ -0.53
CD40-203ENST00000461171 RIOK1Q9BRS2 568 aaKnown RBP11.77□□□□□ -0.53
CD40-203ENST00000461171 CHMP4BQ9H444 224 aaKnown RBP11.77□□□□□ -0.53
CD40-203ENST00000461171 SRRDQ9UH36 339 aa11.77□□□□□ -0.53
CD40-203ENST00000461171 PALD1Q9ULE6 856 aa11.77□□□□□ -0.53
CD40-203ENST00000461171 MGAMO43451 1857 aa11.76□□□□□ -0.53
CD40-203ENST00000461171 RAB11FIP3O75154 756 aa11.76□□□□□ -0.53
CD40-203ENST00000461171 OSBPP22059 807 aa11.76□□□□□ -0.53
CD40-203ENST00000461171 MAP3K12Q12852 859 aa11.76□□□□□ -0.53
CD40-203ENST00000461171 SPP2Q13103 211 aa11.76□□□□□ -0.53
CD40-203ENST00000461171 SH3D19Q5HYK7 790 aa11.76□□□□□ -0.53
CD40-203ENST00000461171 FOXP4Q8IVH2 680 aaPredicted RBP11.76□□□□□ -0.53
CD40-203ENST00000461171 WDR18Q9BV38 432 aa11.76□□□□□ -0.53
CD40-203ENST00000461171 MYH1P12882 1939 aa11.76□□□□□ -0.53
CD40-203ENST00000461171 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
CD40-203ENST00000461171 ASNSP08243 561 aa11.75□□□□□ -0.53
CD40-203ENST00000461171 PDE6AP16499 860 aa11.75□□□□□ -0.53
CD40-203ENST00000461171 HMGCS2P54868 508 aa11.75□□□□□ -0.53
CD40-203ENST00000461171 SHROOM1Q2M3G4 852 aaPredicted RBP11.75□□□□□ -0.53
CD40-203ENST00000461171 SH3TC2Q8TF17 1288 aa11.75□□□□□ -0.53
CD40-203ENST00000461171 EHD4Q9H223 541 aa11.75□□□□□ -0.53
CD40-203ENST00000461171 GINM1Q9NU53 330 aa11.75□□□□□ -0.53
CD40-203ENST00000461171 SAP30BPQ9UHR5 308 aaKnown RBP11.75□□□□□ -0.53
CD40-203ENST00000461171 ZBTB21Q9ULJ3 1066 aa11.75□□□□□ -0.53
CD40-203ENST00000461171 NAV1Q8NEY1 1877 aa11.74□□□□□ -0.53
CD40-203ENST00000461171 APBB1O00213 710 aa11.74□□□□□ -0.53
CD40-203ENST00000461171 HLA-DOAP06340 250 aa11.74□□□□□ -0.53
CD40-203ENST00000461171 IFIT2P09913 472 aaKnown RBP11.74□□□□□ -0.53
CD40-203ENST00000461171 FCGRTP55899 365 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms