RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 OPTNQ96CV9 577 aa19.53■□□□□ 0.72
SHANK1-205ENST00000461154 DDRGK1Q96HY6 314 aa19.53■□□□□ 0.72
SHANK1-205ENST00000461154 PI4KBQ9UBF8 816 aa19.53■□□□□ 0.72
SHANK1-205ENST00000461154 ZNF112Q9UJU3 913 aa19.53■□□□□ 0.72
SHANK1-205ENST00000461154 NAV1Q8NEY1 1877 aa19.52■□□□□ 0.72
SHANK1-205ENST00000461154 TRPA1O75762 1119 aa19.52■□□□□ 0.72
SHANK1-205ENST00000461154 HLA-DOAP06340 250 aa19.52■□□□□ 0.72
SHANK1-205ENST00000461154 ZMYM1Q5SVZ6 1142 aa19.52■□□□□ 0.72
SHANK1-205ENST00000461154 OSBP2Q969R2 916 aa19.52■□□□□ 0.72
SHANK1-205ENST00000461154 ATP8A2Q9NTI2 1148 aa19.52■□□□□ 0.72
SHANK1-205ENST00000461154 TSKSQ9UJT2 592 aa19.52■□□□□ 0.72
SHANK1-205ENST00000461154 MYH1P12882 1939 aa19.52■□□□□ 0.72
SHANK1-205ENST00000461154 TBC1D12O60347 775 aa19.51■□□□□ 0.71
SHANK1-205ENST00000461154 GNAT2P19087 354 aa19.51■□□□□ 0.71
SHANK1-205ENST00000461154 MAP3K10Q02779 954 aa19.51■□□□□ 0.71
SHANK1-205ENST00000461154 ERO1BQ86YB8 467 aa19.51■□□□□ 0.71
SHANK1-205ENST00000461154 ZKSCAN4Q969J2 545 aaPredicted RBP19.51■□□□□ 0.71
SHANK1-205ENST00000461154 SAP30BPQ9UHR5 308 aaKnown RBP19.51■□□□□ 0.71
SHANK1-205ENST00000461154 HERC5Q9UII4 1024 aaKnown RBP19.51■□□□□ 0.71
SHANK1-205ENST00000461154 SLC4A4Q9Y6R1 1079 aa19.51■□□□□ 0.71
SHANK1-205ENST00000461154 OTOFQ9HC10 1997 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 SPDYE5A6NIY4 337 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 HIP1O00291 1037 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 GPAA1O43292 621 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 ALDH1A1P00352 501 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 GJA5P36382 358 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 TTC6Q86TZ1 520 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 AMOTL1Q8IY63 956 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 CRACR2BQ8N4Y2 399 aaPredicted RBP19.5■□□□□ 0.71
SHANK1-205ENST00000461154 SDR42E1Q8WUS8 393 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 STRBPQ96SI9 672 aaKnown RBP19.5■□□□□ 0.71
SHANK1-205ENST00000461154 TRIM34Q9BYJ4 488 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 DCP1AQ9NPI6 582 aaPredicted RBP19.5■□□□□ 0.71
SHANK1-205ENST00000461154 PALD1Q9ULE6 856 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 SNCAIPQ9Y6H5 919 aa19.5■□□□□ 0.71
SHANK1-205ENST00000461154 DDX60LQ5H9U9 1706 aaKnown RBP19.49■□□□□ 0.71
SHANK1-205ENST00000461154 M0R2C6 588 aa19.49■□□□□ 0.71
SHANK1-205ENST00000461154 POLR3DP05423 398 aaPredicted RBP19.49■□□□□ 0.71
SHANK1-205ENST00000461154 INPP5BP32019 993 aa19.49■□□□□ 0.71
SHANK1-205ENST00000461154 OTUD7BQ6GQQ9 843 aa19.49■□□□□ 0.71
SHANK1-205ENST00000461154 FOXP4Q8IVH2 680 aaPredicted RBP19.49■□□□□ 0.71
SHANK1-205ENST00000461154 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.49■□□□□ 0.71
SHANK1-205ENST00000461154 HELLSQ9NRZ9 838 aa19.49■□□□□ 0.71
SHANK1-205ENST00000461154 MCM9Q9NXL9 1143 aa19.49■□□□□ 0.71
SHANK1-205ENST00000461154 PRKAB2O43741 272 aa19.48■□□□□ 0.71
SHANK1-205ENST00000461154 GSPT1P15170 499 aaKnown RBP19.48■□□□□ 0.71
SHANK1-205ENST00000461154 GTF2A2P52657 109 aa19.48■□□□□ 0.71
SHANK1-205ENST00000461154 NOL9Q5SY16 702 aaKnown RBP19.48■□□□□ 0.71
SHANK1-205ENST00000461154 OTUD5Q96G74 571 aa19.48■□□□□ 0.71
SHANK1-205ENST00000461154 TESPA1A2RU30 521 aaPredicted RBP19.47■□□□□ 0.71
SHANK1-205ENST00000461154 SDSP20132 328 aa19.47■□□□□ 0.71
SHANK1-205ENST00000461154 PPATQ06203 517 aa19.47■□□□□ 0.71
SHANK1-205ENST00000461154 GIMAP6Q6P9H5 292 aa19.47■□□□□ 0.71
SHANK1-205ENST00000461154 IFNL1Q8IU54 200 aa19.47■□□□□ 0.71
SHANK1-205ENST00000461154 CNKSR2Q8WXI2 1034 aa19.47■□□□□ 0.71
SHANK1-205ENST00000461154 SEC62Q99442 399 aaKnown RBP19.47■□□□□ 0.71
SHANK1-205ENST00000461154 EHD4Q9H223 541 aa19.47■□□□□ 0.71
SHANK1-205ENST00000461154 DIAPH3Q9NSV4 1193 aa19.47■□□□□ 0.71
SHANK1-205ENST00000461154 PHF20L1A8MW92 1017 aa19.46■□□□□ 0.71
SHANK1-205ENST00000461154 PPIL2Q13356 520 aa19.46■□□□□ 0.71
SHANK1-205ENST00000461154 MCMDC2Q4G0Z9 681 aa19.46■□□□□ 0.71
SHANK1-205ENST00000461154 METTL16Q86W50 562 aaKnown RBP19.46■□□□□ 0.71
SHANK1-205ENST00000461154 NACAP1Q9BZK3 213 aa19.46■□□□□ 0.71
SHANK1-205ENST00000461154 SERPINB13Q9UIV8 391 aa19.46■□□□□ 0.71
SHANK1-205ENST00000461154 TAOK2Q9UL54 1235 aa19.46■□□□□ 0.71
SHANK1-205ENST00000461154 SIPA1L1O43166 1804 aa19.46■□□□□ 0.71
SHANK1-205ENST00000461154 PATL2C9JE40 543 aaKnown RBP19.45■□□□□ 0.7
SHANK1-205ENST00000461154 CTNND1O60716 968 aaKnown RBP19.45■□□□□ 0.7
SHANK1-205ENST00000461154 APPP05067 770 aa19.45■□□□□ 0.7
SHANK1-205ENST00000461154 MFAP1P55081 439 aaKnown RBP19.45■□□□□ 0.7
SHANK1-205ENST00000461154 NMIQ13287 307 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-205ENST00000461154 SLC4A8Q2Y0W8 1093 aa19.45■□□□□ 0.7
SHANK1-205ENST00000461154 SCYL3Q8IZE3 742 aa19.45■□□□□ 0.7
SHANK1-205ENST00000461154 TNS4Q8IZW8 715 aa19.45■□□□□ 0.7
SHANK1-205ENST00000461154 MS4A4AQ96JQ5 239 aa19.45■□□□□ 0.7
SHANK1-205ENST00000461154 FAM227BQ96M60 508 aa19.45■□□□□ 0.7
SHANK1-205ENST00000461154 CFHR5Q9BXR6 569 aa19.45■□□□□ 0.7
SHANK1-205ENST00000461154 PICK1Q9NRD5 415 aa19.45■□□□□ 0.7
SHANK1-205ENST00000461154 ARPP21Q9UBL0 812 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-205ENST00000461154 BAZ2AQ9UIF9 1905 aaKnown RBP19.45■□□□□ 0.7
SHANK1-205ENST00000461154 A0A0D9SFI3 127 aa19.44■□□□□ 0.7
SHANK1-205ENST00000461154 FAM196BA6NMK8 535 aa19.44■□□□□ 0.7
SHANK1-205ENST00000461154 GSG1L2A8MUP6 293 aa19.44■□□□□ 0.7
SHANK1-205ENST00000461154 IRF6O14896 467 aa19.44■□□□□ 0.7
SHANK1-205ENST00000461154 TBC1D8O95759 1140 aa19.44■□□□□ 0.7
SHANK1-205ENST00000461154 CETPP11597 493 aa19.44■□□□□ 0.7
SHANK1-205ENST00000461154 SNAPC2Q13487 334 aa19.44■□□□□ 0.7
SHANK1-205ENST00000461154 CCL15-CCL14A0A0B4J2E2 113 aa19.43■□□□□ 0.7
SHANK1-205ENST00000461154 IGF2BP3O00425 579 aaKnown RBP eCLIP19.43■□□□□ 0.7
SHANK1-205ENST00000461154 TDO2P48775 406 aa19.43■□□□□ 0.7
SHANK1-205ENST00000461154 CCL15Q16663 113 aa19.43■□□□□ 0.7
SHANK1-205ENST00000461154 DOCK1Q14185 1865 aa19.43■□□□□ 0.7
SHANK1-205ENST00000461154 PCNTO95613 3336 aa19.42■□□□□ 0.7
SHANK1-205ENST00000461154 USP17L12C9JPN9 530 aa19.42■□□□□ 0.7
SHANK1-205ENST00000461154 USP17L21D6R901 530 aa19.42■□□□□ 0.7
SHANK1-205ENST00000461154 SLURP2P0DP57 97 aa19.42■□□□□ 0.7
SHANK1-205ENST00000461154 PLCD1P51178 756 aa19.42■□□□□ 0.7
SHANK1-205ENST00000461154 NOM1Q5C9Z4 860 aaKnown RBP19.42■□□□□ 0.7
SHANK1-205ENST00000461154 C12orf60Q5U649 245 aa19.42■□□□□ 0.7
SHANK1-205ENST00000461154 CWC27Q6UX04 472 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms