RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 DDTLA6NHG4 134 aaPredicted RBP16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 PHF20L1A8MW92 1017 aa16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 PDHXO00330 501 aa16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 GOLIM4O00461 696 aa16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 GNRH1P01148 92 aa16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 RHBDL3P58872 404 aa16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 NBPF11Q86T75 865 aa16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 CERS3Q8IU89 383 aa16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 TRIM34Q9BYJ4 488 aa16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 DHX36Q9H2U1 1008 aaKnown RBP16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 DDX4Q9NQI0 724 aaKnown RBP16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 NDUFB9Q9Y6M9 179 aa16.03■□□□□ 0.16
RAB11FIP3-207ENST00000461009 NEFLP07196 543 aa16.02■□□□□ 0.16
RAB11FIP3-207ENST00000461009 PTPRAP18433 802 aa16.02■□□□□ 0.16
RAB11FIP3-207ENST00000461009 CYP7A1P22680 504 aa16.02■□□□□ 0.16
RAB11FIP3-207ENST00000461009 SH3BP5LQ7L8J4 393 aa16.02■□□□□ 0.16
RAB11FIP3-207ENST00000461009 PARK7Q99497 189 aaKnown RBP16.02■□□□□ 0.16
RAB11FIP3-207ENST00000461009 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.02■□□□□ 0.16
RAB11FIP3-207ENST00000461009 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.16
RAB11FIP3-207ENST00000461009 ANTXR1Q9H6X2 564 aa16.02■□□□□ 0.16
RAB11FIP3-207ENST00000461009 AATFQ9NY61 560 aaKnown RBP eCLIP16.02■□□□□ 0.16
RAB11FIP3-207ENST00000461009 RFX7Q2KHR2 1363 aa16.01■□□□□ 0.15
RAB11FIP3-207ENST00000461009 ATRNL1Q5VV63 1379 aa16.01■□□□□ 0.15
RAB11FIP3-207ENST00000461009 DOCK2Q92608 1830 aa16.01■□□□□ 0.15
RAB11FIP3-207ENST00000461009 GLRX3O76003 335 aaKnown RBP16.01■□□□□ 0.15
RAB11FIP3-207ENST00000461009 B4GALNT3Q6L9W6 998 aa16.01■□□□□ 0.15
RAB11FIP3-207ENST00000461009 MAGEB6Q8N7X4 407 aa16.01■□□□□ 0.15
RAB11FIP3-207ENST00000461009 ZNF384Q8TF68 577 aa16.01■□□□□ 0.15
RAB11FIP3-207ENST00000461009 TBC1D2Q9BYX2 928 aa16.01■□□□□ 0.15
RAB11FIP3-207ENST00000461009 PI4KBQ9UBF8 816 aa16.01■□□□□ 0.15
RAB11FIP3-207ENST00000461009 HERC5Q9UII4 1024 aaKnown RBP16.01■□□□□ 0.15
RAB11FIP3-207ENST00000461009 MX1P20591 662 aa16■□□□□ 0.15
RAB11FIP3-207ENST00000461009 HOXD10P28358 340 aa16■□□□□ 0.15
RAB11FIP3-207ENST00000461009 PRMT2P55345 433 aa16■□□□□ 0.15
RAB11FIP3-207ENST00000461009 PPP4CP60510 307 aa16■□□□□ 0.15
RAB11FIP3-207ENST00000461009 NUCB1Q02818 461 aa16■□□□□ 0.15
RAB11FIP3-207ENST00000461009 LRRFIP1Q32MZ4 808 aaKnown RBP16■□□□□ 0.15
RAB11FIP3-207ENST00000461009 SLC9C2Q5TAH2 1124 aa16■□□□□ 0.15
RAB11FIP3-207ENST00000461009 ZSCAN25Q6NSZ9 544 aa16■□□□□ 0.15
RAB11FIP3-207ENST00000461009 CHD1LQ86WJ1 897 aa16■□□□□ 0.15
RAB11FIP3-207ENST00000461009 SH3RF3Q8TEJ3 882 aaPredicted RBP16■□□□□ 0.15
RAB11FIP3-207ENST00000461009 COL2A1P02458 1487 aaPredicted RBP15.99■□□□□ 0.15
RAB11FIP3-207ENST00000461009 A0A0G2JLL6 359 aaPredicted RBP15.99■□□□□ 0.15
RAB11FIP3-207ENST00000461009 LACTBP83111 547 aaPredicted RBP15.99■□□□□ 0.15
RAB11FIP3-207ENST00000461009 SLC9C1Q4G0N8 1177 aa15.99■□□□□ 0.15
RAB11FIP3-207ENST00000461009 GADL1Q6ZQY3 521 aa15.99■□□□□ 0.15
RAB11FIP3-207ENST00000461009 PRRT2Q7Z6L0 340 aaPredicted RBP15.99■□□□□ 0.15
RAB11FIP3-207ENST00000461009 CRACR2BQ8N4Y2 399 aaPredicted RBP15.99■□□□□ 0.15
RAB11FIP3-207ENST00000461009 LNPKQ9C0E8 428 aa15.99■□□□□ 0.15
RAB11FIP3-207ENST00000461009 AFG3L2Q9Y4W6 797 aa15.99■□□□□ 0.15
RAB11FIP3-207ENST00000461009 MAST2Q6P0Q8 1798 aa15.99■□□□□ 0.15
RAB11FIP3-207ENST00000461009 HLA-DOAP06340 250 aa15.98■□□□□ 0.15
RAB11FIP3-207ENST00000461009 PDE6AP16499 860 aa15.98■□□□□ 0.15
RAB11FIP3-207ENST00000461009 C17orf99Q6UX52 265 aa15.98■□□□□ 0.15
RAB11FIP3-207ENST00000461009 FOXP4Q8IVH2 680 aaPredicted RBP15.98■□□□□ 0.15
RAB11FIP3-207ENST00000461009 TGFBRAP1Q8WUH2 860 aa15.98■□□□□ 0.15
RAB11FIP3-207ENST00000461009 TMEM106CQ9BVX2 250 aa15.98■□□□□ 0.15
RAB11FIP3-207ENST00000461009 AS3MTQ9HBK9 375 aa15.98■□□□□ 0.15
RAB11FIP3-207ENST00000461009 STAP2Q9UGK3 403 aa15.98■□□□□ 0.15
RAB11FIP3-207ENST00000461009 CPA4Q9UI42 421 aa15.98■□□□□ 0.15
RAB11FIP3-207ENST00000461009 SLC45A1Q9Y2W3 748 aa15.98■□□□□ 0.15
RAB11FIP3-207ENST00000461009 TRIM75PA6NK02 468 aa15.97■□□□□ 0.15
RAB11FIP3-207ENST00000461009 FMNL1O95466 1100 aaPredicted RBP15.97■□□□□ 0.15
RAB11FIP3-207ENST00000461009 USP5P45974 858 aa15.97■□□□□ 0.15
RAB11FIP3-207ENST00000461009 OTUD7AQ8TE49 926 aaPredicted RBP15.97■□□□□ 0.15
RAB11FIP3-207ENST00000461009 ARMC5Q96C12 935 aa15.97■□□□□ 0.15
RAB11FIP3-207ENST00000461009 EDC3Q96F86 508 aaKnown RBP15.97■□□□□ 0.15
RAB11FIP3-207ENST00000461009 PNMA3Q9UL41 463 aa15.97■□□□□ 0.15
RAB11FIP3-207ENST00000461009 MAGEB6P1A0A0J9YX57 407 aa15.96■□□□□ 0.15
RAB11FIP3-207ENST00000461009 USP17L5A8MUK1 530 aa15.96■□□□□ 0.15
RAB11FIP3-207ENST00000461009 CAP2P40123 477 aa15.96■□□□□ 0.15
RAB11FIP3-207ENST00000461009 PSMC4P43686 418 aa15.96■□□□□ 0.15
RAB11FIP3-207ENST00000461009 PDE1AP54750 535 aa15.96■□□□□ 0.15
RAB11FIP3-207ENST00000461009 PABPC4Q13310 644 aaKnown RBP eCLIP15.96■□□□□ 0.15
RAB11FIP3-207ENST00000461009 TSHZ3Q63HK5 1081 aa15.96■□□□□ 0.15
RAB11FIP3-207ENST00000461009 MAPKAPK5Q8IW41 473 aa15.96■□□□□ 0.15
RAB11FIP3-207ENST00000461009 KBTBD3Q8NAB2 608 aa15.96■□□□□ 0.15
RAB11FIP3-207ENST00000461009 ZNF280CQ8ND82 737 aa15.96■□□□□ 0.15
RAB11FIP3-207ENST00000461009 SMCR8Q8TEV9 937 aaPredicted RBP15.96■□□□□ 0.15
RAB11FIP3-207ENST00000461009 MYH7P12883 1935 aa15.96■□□□□ 0.14
RAB11FIP3-207ENST00000461009 FLT1P17948 1338 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 SALL3Q9BXA9 1300 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 ZNF532Q9HCE3 1301 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 ADD2P35612 726 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 FCGRTP55899 365 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 MOGSQ13724 837 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 UBE3CQ15386 1083 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 GPAT2Q6NUI2 795 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 ADGRA1Q86SQ6 560 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 MIGA1Q8NAN2 632 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 PI4K2BQ8TCG2 481 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 GINM1Q9NU53 330 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 PTCH2Q9Y6C5 1203 aa15.95■□□□□ 0.14
RAB11FIP3-207ENST00000461009 FAM196BA6NMK8 535 aa15.94■□□□□ 0.14
RAB11FIP3-207ENST00000461009 ZFYP08048 801 aaPredicted RBP15.94■□□□□ 0.14
RAB11FIP3-207ENST00000461009 ASNSP08243 561 aa15.94■□□□□ 0.14
RAB11FIP3-207ENST00000461009 CYP2C8P10632 490 aa15.94■□□□□ 0.14
RAB11FIP3-207ENST00000461009 DYNLL1P63167 89 aaKnown RBP15.94■□□□□ 0.14
RAB11FIP3-207ENST00000461009 SPP2Q13103 211 aa15.94■□□□□ 0.14
RAB11FIP3-207ENST00000461009 SLC4A8Q2Y0W8 1093 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms