RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 GIMAP6Q6P9H5 292 aa13.28□□□□□ -0.28
APTX-209ENST00000460940 MIGA2Q7L4E1 593 aa13.28□□□□□ -0.28
APTX-209ENST00000460940 TTC6Q86TZ1 520 aa13.28□□□□□ -0.28
APTX-209ENST00000460940 METTL16Q86W50 562 aaKnown RBP13.28□□□□□ -0.28
APTX-209ENST00000460940 RASAL3Q86YV0 1011 aa13.28□□□□□ -0.28
APTX-209ENST00000460940 EHD4Q9H223 541 aa13.28□□□□□ -0.28
APTX-209ENST00000460940 DCP1AQ9NPI6 582 aaPredicted RBP13.28□□□□□ -0.28
APTX-209ENST00000460940 FZD1Q9UP38 647 aa13.28□□□□□ -0.28
APTX-209ENST00000460940 SLC4A4Q9Y6R1 1079 aa13.28□□□□□ -0.28
APTX-209ENST00000460940 M0R2C6 588 aa13.27□□□□□ -0.28
APTX-209ENST00000460940 NOL9Q5SY16 702 aaKnown RBP13.27□□□□□ -0.28
APTX-209ENST00000460940 FOXP4Q8IVH2 680 aaPredicted RBP13.27□□□□□ -0.28
APTX-209ENST00000460940 AMOTL1Q8IY63 956 aa13.27□□□□□ -0.28
APTX-209ENST00000460940 SDR42E1Q8WUS8 393 aa13.27□□□□□ -0.28
APTX-209ENST00000460940 SAP30BPQ9UHR5 308 aaKnown RBP13.27□□□□□ -0.28
APTX-209ENST00000460940 PALD1Q9ULE6 856 aa13.27□□□□□ -0.28
APTX-209ENST00000460940 AK9Q5TCS8 1911 aa13.27□□□□□ -0.28
APTX-209ENST00000460940 FAM155AB1AL88 458 aaPredicted RBP13.27□□□□□ -0.29
APTX-209ENST00000460940 SDSP20132 328 aa13.27□□□□□ -0.29
APTX-209ENST00000460940 MAP2K2P36507 400 aa13.27□□□□□ -0.29
APTX-209ENST00000460940 VGLL4Q14135 290 aa13.27□□□□□ -0.29
APTX-209ENST00000460940 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.27□□□□□ -0.29
APTX-209ENST00000460940 SLC10A4Q96EP9 437 aa13.27□□□□□ -0.29
APTX-209ENST00000460940 TRIM34Q9BYJ4 488 aa13.27□□□□□ -0.29
APTX-209ENST00000460940 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.27□□□□□ -0.29
APTX-209ENST00000460940 MCM9Q9NXL9 1143 aa13.27□□□□□ -0.29
APTX-209ENST00000460940 PRKAB2O43741 272 aa13.26□□□□□ -0.29
APTX-209ENST00000460940 ZBTB48P10074 688 aaPredicted RBP13.26□□□□□ -0.29
APTX-209ENST00000460940 CRACR2BQ8N4Y2 399 aaPredicted RBP13.26□□□□□ -0.29
APTX-209ENST00000460940 JMYQ8N9B5 988 aa13.26□□□□□ -0.29
APTX-209ENST00000460940 CLMNQ96JQ2 1002 aa13.26□□□□□ -0.29
APTX-209ENST00000460940 DIAPH3Q9NSV4 1193 aa13.26□□□□□ -0.29
APTX-209ENST00000460940 ARPP21Q9UBL0 812 aaPredicted RBP13.26□□□□□ -0.29
APTX-209ENST00000460940 MYH1P12882 1939 aa13.26□□□□□ -0.29
APTX-209ENST00000460940 SIPA1L1O43166 1804 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 PHF20L1A8MW92 1017 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 POLR3DP05423 398 aaPredicted RBP13.25□□□□□ -0.29
APTX-209ENST00000460940 MFAP1P55081 439 aaKnown RBP13.25□□□□□ -0.29
APTX-209ENST00000460940 NMIQ13287 307 aaPredicted RBP13.25□□□□□ -0.29
APTX-209ENST00000460940 MCMDC2Q4G0Z9 681 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 REM2Q8IYK8 340 aaPredicted RBP13.25□□□□□ -0.29
APTX-209ENST00000460940 NACAP1Q9BZK3 213 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 SERPINB13Q9UIV8 391 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 SNCAIPQ9Y6H5 919 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 A0A0D9SFI3 127 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 SPDYE5A6NIY4 337 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 GSG1L2A8MUP6 293 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 CTNND1O60716 968 aaKnown RBP13.25□□□□□ -0.29
APTX-209ENST00000460940 INPP5BP32019 993 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 GRM1Q13255 1194 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 SPRYD7Q5W111 196 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 WNK4Q96J92 1243 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 FAM227BQ96M60 508 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 SEC62Q99442 399 aaKnown RBP13.25□□□□□ -0.29
APTX-209ENST00000460940 ELP3Q9H9T3 547 aa13.25□□□□□ -0.29
APTX-209ENST00000460940 BMP2KLQ5H9B9 411 aa13.24□□□□□ -0.29
APTX-209ENST00000460940 ERO1BQ86YB8 467 aa13.24□□□□□ -0.29
APTX-209ENST00000460940 SCYL3Q8IZE3 742 aa13.24□□□□□ -0.29
APTX-209ENST00000460940 PICK1Q9NRD5 415 aa13.24□□□□□ -0.29
APTX-209ENST00000460940 GINM1Q9NU53 330 aa13.24□□□□□ -0.29
APTX-209ENST00000460940 PATL2C9JE40 543 aaKnown RBP13.23□□□□□ -0.29
APTX-209ENST00000460940 TDO2P48775 406 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 SBK1Q52WX2 424 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 ZKSCAN4Q969J2 545 aaPredicted RBP13.23□□□□□ -0.29
APTX-209ENST00000460940 DNAJC18Q9H819 358 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 SWAP70Q9UH65 585 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 CCDC171Q6TFL3 1326 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 RAD50Q92878 1312 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 FAM196BA6NMK8 535 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 USP17L12C9JPN9 530 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 USP17L21D6R901 530 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 AOC2O75106 756 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 APPP05067 770 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 PLCD1P51178 756 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 MAP2K1Q02750 393 aaPredicted RBP13.23□□□□□ -0.29
APTX-209ENST00000460940 PPATQ06203 517 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 GABPAQ06546 454 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 PPIL2Q13356 520 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 C12orf60Q5U649 245 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 OPTNQ96CV9 577 aa13.23□□□□□ -0.29
APTX-209ENST00000460940 EPB41L4AQ9HCS5 686 aaPredicted RBP13.23□□□□□ -0.29
APTX-209ENST00000460940 DOCK1Q14185 1865 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 ROBO3Q96MS0 1386 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 LAMB1P07942 1786 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 CAP2P40123 477 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 SREBF2Q12772 1141 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 SLC4A8Q2Y0W8 1093 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 TATDN1Q6P1N9 297 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 CTR9Q6PD62 1173 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 CCDC129Q6ZRS4 1044 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 TBC1D2Q9BYX2 928 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 ZMYM6O95789 1325 aa13.22□□□□□ -0.29
APTX-209ENST00000460940 MANSC4A6NHS7 340 aaPredicted RBP13.21□□□□□ -0.29
APTX-209ENST00000460940 CYP2D6P10635 497 aa13.21□□□□□ -0.29
APTX-209ENST00000460940 KIF23Q02241 960 aaPredicted RBP13.21□□□□□ -0.29
APTX-209ENST00000460940 CWC27Q6UX04 472 aaKnown RBP13.21□□□□□ -0.29
APTX-209ENST00000460940 OTUD5Q96G74 571 aa13.21□□□□□ -0.29
APTX-209ENST00000460940 NAPBQ9H115 298 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms