RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 SLC45A1Q9Y2W3 748 aa11.55□□□□□ -0.56
COL6A2-207ENST00000460886 AFG3L2Q9Y4W6 797 aa11.55□□□□□ -0.56
COL6A2-207ENST00000460886 MROH7-TTC4A0A0A0MT08 1334 aa11.55□□□□□ -0.56
COL6A2-207ENST00000460886 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
COL6A2-207ENST00000460886 DDTLA6NHG4 134 aaPredicted RBP11.54□□□□□ -0.56
COL6A2-207ENST00000460886 TBC1D12O60347 775 aa11.54□□□□□ -0.56
COL6A2-207ENST00000460886 CTNND1O60716 968 aaKnown RBP11.54□□□□□ -0.56
COL6A2-207ENST00000460886 OSBPP22059 807 aa11.54□□□□□ -0.56
COL6A2-207ENST00000460886 HOXD10P28358 340 aa11.54□□□□□ -0.56
COL6A2-207ENST00000460886 MCAMP43121 646 aa11.54□□□□□ -0.56
COL6A2-207ENST00000460886 PSMC4P43686 418 aa11.54□□□□□ -0.56
COL6A2-207ENST00000460886 RHBDL3P58872 404 aa11.54□□□□□ -0.56
COL6A2-207ENST00000460886 FASTKD5Q7L8L6 764 aaKnown RBP11.54□□□□□ -0.56
COL6A2-207ENST00000460886 DZIP1Q86YF9 867 aaKnown RBP11.54□□□□□ -0.56
COL6A2-207ENST00000460886 SPATA5Q8NB90 893 aa11.54□□□□□ -0.56
COL6A2-207ENST00000460886 DDX4Q9NQI0 724 aaKnown RBP11.54□□□□□ -0.56
COL6A2-207ENST00000460886 HMG20BQ9P0W2 317 aa11.54□□□□□ -0.56
COL6A2-207ENST00000460886 ATAD5Q96QE3 1844 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 RANBP2P49792 3224 aaKnown RBP11.53□□□□□ -0.56
COL6A2-207ENST00000460886 IGHDP01880 384 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 BTDP43251 543 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 MECOMQ03112 1051 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 SLC4A8Q2Y0W8 1093 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 UBE2Q1Q7Z7E8 422 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 SHISA4Q96DD7 197 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 ZNF512BQ96KM6 892 aaPredicted RBP11.53□□□□□ -0.56
COL6A2-207ENST00000460886 SNRKQ9NRH2 765 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 ABCF2Q9UG63 623 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 ZHX2Q9Y6X8 837 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 MAST2Q6P0Q8 1798 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 FOCADQ5VW36 1801 aa11.53□□□□□ -0.56
COL6A2-207ENST00000460886 SIPA1L1O43166 1804 aa11.52□□□□□ -0.57
COL6A2-207ENST00000460886 CYP2C8P10632 490 aa11.52□□□□□ -0.57
COL6A2-207ENST00000460886 GRK4P32298 578 aa11.52□□□□□ -0.57
COL6A2-207ENST00000460886 ANKRD45Q5TZF3 282 aa11.52□□□□□ -0.57
COL6A2-207ENST00000460886 TBC1D9Q6ZT07 1266 aa11.52□□□□□ -0.57
COL6A2-207ENST00000460886 ERICH6Q7L0X2 663 aa11.52□□□□□ -0.57
COL6A2-207ENST00000460886 NSUN4Q96CB9 384 aaKnown RBP11.52□□□□□ -0.57
COL6A2-207ENST00000460886 PICK1Q9NRD5 415 aa11.52□□□□□ -0.57
COL6A2-207ENST00000460886 ZBTB47Q9UFB7 747 aaPredicted RBP11.52□□□□□ -0.57
COL6A2-207ENST00000460886 MYPNQ86TC9 1320 aa11.52□□□□□ -0.57
COL6A2-207ENST00000460886 CDK5RAP2Q96SN8 1893 aa11.51□□□□□ -0.57
COL6A2-207ENST00000460886 FMNL1O95466 1100 aaPredicted RBP11.51□□□□□ -0.57
COL6A2-207ENST00000460886 GJB1P08034 283 aa11.51□□□□□ -0.57
COL6A2-207ENST00000460886 ZAP70P43403 619 aa11.51□□□□□ -0.57
COL6A2-207ENST00000460886 GJA8P48165 433 aa11.51□□□□□ -0.57
COL6A2-207ENST00000460886 FCGRTP55899 365 aa11.51□□□□□ -0.57
COL6A2-207ENST00000460886 MTFR1Q15390 333 aa11.51□□□□□ -0.57
COL6A2-207ENST00000460886 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
COL6A2-207ENST00000460886 SZT2Q5T011 3432 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 IGSF3O75054 1194 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 CYP2E1P05181 493 aaPredicted RBP11.5□□□□□ -0.57
COL6A2-207ENST00000460886 SLURP2P0DP57 97 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 CAPN2P17655 700 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 GSTO1P78417 241 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 PRKCZQ05513 592 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 IRF5Q13568 498 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 B4GALNT3Q6L9W6 998 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 ZSCAN29Q8IWY8 852 aaPredicted RBP11.5□□□□□ -0.57
COL6A2-207ENST00000460886 SMC5Q8IY18 1101 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 SLAIN1Q8ND83 568 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 RAET1EQ8TD07 263 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 TBC1D2Q9BYX2 928 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 OSBPL5Q9H0X9 879 aaPredicted RBP11.5□□□□□ -0.57
COL6A2-207ENST00000460886 LRP2BPQ9P2M1 347 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 AGTPBP1Q9UPW5 1226 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 NDUFB9Q9Y6M9 179 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 DOCK3Q8IZD9 2030 aa11.5□□□□□ -0.57
COL6A2-207ENST00000460886 NEFLP07196 543 aa11.49□□□□□ -0.57
COL6A2-207ENST00000460886 LDHCP07864 332 aa11.49□□□□□ -0.57
COL6A2-207ENST00000460886 FXR1P51114 621 aaKnown RBP eCLIP11.49□□□□□ -0.57
COL6A2-207ENST00000460886 PICALMQ13492 652 aa11.49□□□□□ -0.57
COL6A2-207ENST00000460886 PROCA1Q8NCQ7 364 aaPredicted RBP11.49□□□□□ -0.57
COL6A2-207ENST00000460886 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
COL6A2-207ENST00000460886 BOLA2Q9H3K6 86 aa11.49□□□□□ -0.57
COL6A2-207ENST00000460886 RAI14Q9P0K7 980 aa11.49□□□□□ -0.57
COL6A2-207ENST00000460886 TRIOBPQ9H2D6 2365 aa11.49□□□□□ -0.57
COL6A2-207ENST00000460886 MYCP01106 439 aaPredicted RBP11.48□□□□□ -0.57
COL6A2-207ENST00000460886 CCL5P13501 91 aa11.48□□□□□ -0.57
COL6A2-207ENST00000460886 ATP5JP18859 108 aa11.48□□□□□ -0.57
COL6A2-207ENST00000460886 FAM110CQ1W6H9 321 aa11.48□□□□□ -0.57
COL6A2-207ENST00000460886 SH3D19Q5HYK7 790 aa11.48□□□□□ -0.57
COL6A2-207ENST00000460886 TSHZ3Q63HK5 1081 aa11.48□□□□□ -0.57
COL6A2-207ENST00000460886 GADL1Q6ZQY3 521 aa11.48□□□□□ -0.57
COL6A2-207ENST00000460886 METTL16Q86W50 562 aaKnown RBP11.48□□□□□ -0.57
COL6A2-207ENST00000460886 OTUD7AQ8TE49 926 aaPredicted RBP11.48□□□□□ -0.57
COL6A2-207ENST00000460886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL6A2-207ENST00000460886 GPATCH3Q96I76 525 aa11.48□□□□□ -0.57
COL6A2-207ENST00000460886 DNAJC2Q99543 621 aaKnown RBP11.48□□□□□ -0.57
COL6A2-207ENST00000460886 LNPKQ9C0E8 428 aa11.48□□□□□ -0.57
COL6A2-207ENST00000460886 ANTXR1Q9H6X2 564 aa11.48□□□□□ -0.57
COL6A2-207ENST00000460886 PIH1D3Q9NQM4 214 aaKnown RBP11.48□□□□□ -0.57
COL6A2-207ENST00000460886 ECHDC1Q9NTX5 307 aa11.48□□□□□ -0.57
COL6A2-207ENST00000460886 HERC5Q9UII4 1024 aaKnown RBP11.48□□□□□ -0.57
COL6A2-207ENST00000460886 GABRQQ9UN88 632 aa11.48□□□□□ -0.57
COL6A2-207ENST00000460886 COLQQ9Y215 455 aaPredicted RBP11.48□□□□□ -0.57
COL6A2-207ENST00000460886 MYO5AQ9Y4I1 1855 aaKnown RBP11.48□□□□□ -0.57
COL6A2-207ENST00000460886 TRIM75PA6NK02 468 aa11.47□□□□□ -0.57
COL6A2-207ENST00000460886 H0YGN5 161 aa11.47□□□□□ -0.57
COL6A2-207ENST00000460886 IDH1O75874 414 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms