RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 COA7Q96BR5 231 aa16.84■□□□□ 0.29
SCAMP4-206ENST00000460767 PICK1Q9NRD5 415 aa16.84■□□□□ 0.29
SCAMP4-206ENST00000460767 AGTPBP1Q9UPW5 1226 aa16.84■□□□□ 0.29
SCAMP4-206ENST00000460767 ZHX2Q9Y6X8 837 aa16.84■□□□□ 0.29
SCAMP4-206ENST00000460767 GAKO14976 1311 aa16.83■□□□□ 0.28
SCAMP4-206ENST00000460767 COL2A1P02458 1487 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-206ENST00000460767 PRDX5P30044 214 aa16.83■□□□□ 0.28
SCAMP4-206ENST00000460767 RRP1P56182 461 aaKnown RBP16.83■□□□□ 0.28
SCAMP4-206ENST00000460767 ATP2B3Q16720 1220 aa16.83■□□□□ 0.28
SCAMP4-206ENST00000460767 DEFB123Q8N688 67 aa16.83■□□□□ 0.28
SCAMP4-206ENST00000460767 SMCR8Q8TEV9 937 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-206ENST00000460767 DOCK3Q8IZD9 2030 aa16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 SEMA3EO15041 775 aa16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 CTNND1O60716 968 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 HMGCRP04035 888 aa16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 SLC5A1P13866 664 aa16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 TFCP2Q12800 502 aa16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 DIXDC1Q155Q3 683 aa16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 TDHQ8IZJ6 230 aa16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 DIS3LQ8TF46 1054 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 GPR108Q9NPR9 543 aa16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 PNMA3Q9UL41 463 aa16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 MYH2Q9UKX2 1941 aa16.82■□□□□ 0.28
SCAMP4-206ENST00000460767 PDS5AQ29RF7 1337 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-206ENST00000460767 RPAP2Q8IXW5 612 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-206ENST00000460767 PROCA1Q8NCQ7 364 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-206ENST00000460767 NBPF3Q9H094 633 aa16.81■□□□□ 0.28
SCAMP4-206ENST00000460767 USP40Q9NVE5 1235 aa16.81■□□□□ 0.28
SCAMP4-206ENST00000460767 MTMR10Q9NXD2 777 aa16.81■□□□□ 0.28
SCAMP4-206ENST00000460767 PLXNB2O15031 1838 aa16.81■□□□□ 0.28
SCAMP4-206ENST00000460767 RPTORQ8N122 1335 aa16.8■□□□□ 0.28
SCAMP4-206ENST00000460767 A0A1B0GUL7 405 aa16.8■□□□□ 0.28
SCAMP4-206ENST00000460767 LDHBP07195 334 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-206ENST00000460767 ADORA1P30542 326 aa16.8■□□□□ 0.28
SCAMP4-206ENST00000460767 GADL1Q6ZQY3 521 aa16.8■□□□□ 0.28
SCAMP4-206ENST00000460767 ZFPM1Q8IX07 1006 aa16.8■□□□□ 0.28
SCAMP4-206ENST00000460767 C7orf61Q8IZ16 206 aa16.8■□□□□ 0.28
SCAMP4-206ENST00000460767 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
SCAMP4-206ENST00000460767 OGDHLQ9ULD0 1010 aa16.8■□□□□ 0.28
SCAMP4-206ENST00000460767 PHKA1P46020 1223 aa16.79■□□□□ 0.28
SCAMP4-206ENST00000460767 GCLCP48506 637 aaPredicted RBP16.79■□□□□ 0.28
SCAMP4-206ENST00000460767 RGS3P49796 1198 aa16.79■□□□□ 0.28
SCAMP4-206ENST00000460767 TIMM10P62072 90 aa16.79■□□□□ 0.28
SCAMP4-206ENST00000460767 SH3BP5LQ7L8J4 393 aa16.79■□□□□ 0.28
SCAMP4-206ENST00000460767 ANKRD13CQ8N6S4 541 aa16.79■□□□□ 0.28
SCAMP4-206ENST00000460767 CHMP4BQ9H444 224 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-206ENST00000460767 AKAP2Q9Y2D5 859 aa16.79■□□□□ 0.28
SCAMP4-206ENST00000460767 ATAD5Q96QE3 1844 aa16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 TBC1D12O60347 775 aa16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 MAGEA10P43363 369 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 G3BP1Q13283 466 aaKnown RBP eCLIP16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 MAP3K21Q5TCX8 1036 aa16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 CCDC102BQ68D86 513 aa16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 ZGPATQ8N5A5 531 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 FAM163AQ96GL9 167 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 XAGE2Q96GT9 111 aa16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 C11orf49Q9H6J7 331 aa16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 HMX1Q9NP08 348 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 GJD2Q9UKL4 321 aa16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 DENND2AQ9ULE3 1009 aa16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 CUL9Q8IWT3 2517 aa16.78■□□□□ 0.28
SCAMP4-206ENST00000460767 SURF6O75683 361 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-206ENST00000460767 ZMYND8Q9ULU4 1186 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-206ENST00000460767 PABPC4Q13310 644 aaKnown RBP eCLIP16.76■□□□□ 0.27
SCAMP4-206ENST00000460767 TNNI3KQ59H18 835 aa16.76■□□□□ 0.27
SCAMP4-206ENST00000460767 TREML2Q5T2D2 321 aa16.76■□□□□ 0.27
SCAMP4-206ENST00000460767 FAM109BQ6ICB4 259 aaPredicted RBP16.76■□□□□ 0.27
SCAMP4-206ENST00000460767 Q7L0L9 218 aa16.76■□□□□ 0.27
SCAMP4-206ENST00000460767 OSBPL5Q9H0X9 879 aaPredicted RBP16.76■□□□□ 0.27
SCAMP4-206ENST00000460767 MORF4L1Q9UBU8 362 aa16.76■□□□□ 0.27
SCAMP4-206ENST00000460767 FPGT-TNNI3KV9GXZ4 949 aa16.76■□□□□ 0.27
SCAMP4-206ENST00000460767 MAST2Q6P0Q8 1798 aa16.76■□□□□ 0.27
SCAMP4-206ENST00000460767 DDTLA6NHG4 134 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-206ENST00000460767 TRIM75PA6NK02 468 aa16.75■□□□□ 0.27
SCAMP4-206ENST00000460767 COL6A1P12109 1028 aa16.75■□□□□ 0.27
SCAMP4-206ENST00000460767 ARID4AP29374 1257 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-206ENST00000460767 RASGRF1Q13972 1273 aa16.75■□□□□ 0.27
SCAMP4-206ENST00000460767 SH3D19Q5HYK7 790 aa16.75■□□□□ 0.27
SCAMP4-206ENST00000460767 SLF2Q8IX21 1173 aa16.75■□□□□ 0.27
SCAMP4-206ENST00000460767 ZNF512BQ96KM6 892 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-206ENST00000460767 COL25A1Q9BXS0 654 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-206ENST00000460767 PFASO15067 1338 aa16.74■□□□□ 0.27
SCAMP4-206ENST00000460767 XRCC5P13010 732 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-206ENST00000460767 TRIB2Q92519 343 aa16.74■□□□□ 0.27
SCAMP4-206ENST00000460767 EAF2Q96CJ1 260 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-206ENST00000460767 DDX4Q9NQI0 724 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-206ENST00000460767 DBNLQ9UJU6 430 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-206ENST00000460767 TAOK2Q9UL54 1235 aa16.74■□□□□ 0.27
SCAMP4-206ENST00000460767 EXOC6BQ9Y2D4 811 aa16.74■□□□□ 0.27
SCAMP4-206ENST00000460767 FRMPD3Q5JV73 1810 aa16.74■□□□□ 0.27
SCAMP4-206ENST00000460767 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-206ENST00000460767 ZSCAN29Q8IWY8 852 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-206ENST00000460767 TRMT44Q8IYL2 757 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-206ENST00000460767 ZNF280CQ8ND82 737 aa16.73■□□□□ 0.27
SCAMP4-206ENST00000460767 SOCS4Q8WXH5 440 aa16.73■□□□□ 0.27
SCAMP4-206ENST00000460767 UBE2OQ9C0C9 1292 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-206ENST00000460767 POTEB2H3BUK9 544 aa16.72■□□□□ 0.27
SCAMP4-206ENST00000460767 HMMRO75330 724 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms