RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 CLDN10P78369 228 aa7.37□□□□□ -1.23
PTPN12-209ENST00000460731 TAF7Q15545 349 aaPredicted RBP7.37□□□□□ -1.23
PTPN12-209ENST00000460731 CCDC102BQ68D86 513 aa7.37□□□□□ -1.23
PTPN12-209ENST00000460731 TRIM50Q86XT4 487 aa7.37□□□□□ -1.23
PTPN12-209ENST00000460731 DEPDC4Q8N2C3 294 aa7.37□□□□□ -1.23
PTPN12-209ENST00000460731 PIGBQ92521 554 aa7.37□□□□□ -1.23
PTPN12-209ENST00000460731 IGFLR1Q9H665 355 aa7.37□□□□□ -1.23
PTPN12-209ENST00000460731 PLSCR1O15162 318 aa7.36□□□□□ -1.23
PTPN12-209ENST00000460731 KCNQ2O43526 872 aa7.36□□□□□ -1.23
PTPN12-209ENST00000460731 CALD1Q05682 793 aaKnown RBP7.36□□□□□ -1.23
PTPN12-209ENST00000460731 IER5Q5VY09 327 aa7.36□□□□□ -1.23
PTPN12-209ENST00000460731 IGF2-ASQ6U949 168 aa7.36□□□□□ -1.23
PTPN12-209ENST00000460731 MCM10Q7L590 875 aa7.36□□□□□ -1.23
PTPN12-209ENST00000460731 PTF1AQ7RTS3 328 aa7.36□□□□□ -1.23
PTPN12-209ENST00000460731 PLEKHM2Q8IWE5 1019 aa7.36□□□□□ -1.23
PTPN12-209ENST00000460731 DZIP1LQ8IYY4 767 aaKnown RBP7.36□□□□□ -1.23
PTPN12-209ENST00000460731 RTF1Q92541 710 aaKnown RBP7.36□□□□□ -1.23
PTPN12-209ENST00000460731 LPIN3Q9BQK8 851 aa7.36□□□□□ -1.23
PTPN12-209ENST00000460731 FRRS1LQ9P0K9 344 aa7.36□□□□□ -1.23
PTPN12-209ENST00000460731 DMGDHQ9UI17 866 aaKnown RBP7.36□□□□□ -1.23
PTPN12-209ENST00000460731 RRP7AQ9Y3A4 280 aaKnown RBP7.36□□□□□ -1.23
PTPN12-209ENST00000460731 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.36□□□□□ -1.23
PTPN12-209ENST00000460731 SIPA1L3O60292 1781 aaPredicted RBP7.36□□□□□ -1.23
PTPN12-209ENST00000460731 TOGARAM1Q9Y4F4 1720 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 DKK1O94907 266 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 MAP3K6O95382 1288 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 GRNP28799 593 aaKnown RBP7.35□□□□□ -1.23
PTPN12-209ENST00000460731 CD97P48960 835 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 CCINQ13939 588 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 DCTN1Q14203 1278 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 MCM6Q14566 821 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 ALDH16A1Q8IZ83 802 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 TTC9Q92623 222 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 C2orf49Q9BVC5 232 aaPredicted RBP7.35□□□□□ -1.23
PTPN12-209ENST00000460731 ATG3Q9NT62 314 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 IFT57Q9NWB7 429 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 CHMP3Q9Y3E7 222 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 ITGB4P16144 1822 aa7.35□□□□□ -1.23
PTPN12-209ENST00000460731 ZBED9Q6R2W3 1325 aa7.34□□□□□ -1.23
PTPN12-209ENST00000460731 DEAF1O75398 565 aaPredicted RBP7.34□□□□□ -1.23
PTPN12-209ENST00000460731 NFKB1P19838 968 aa7.34□□□□□ -1.23
PTPN12-209ENST00000460731 CABP4P57796 275 aa7.34□□□□□ -1.23
PTPN12-209ENST00000460731 PLAURQ03405 335 aa7.34□□□□□ -1.23
PTPN12-209ENST00000460731 SLFN5Q08AF3 891 aa7.34□□□□□ -1.23
PTPN12-209ENST00000460731 HIF1AQ16665 826 aa7.34□□□□□ -1.23
PTPN12-209ENST00000460731 ZNF790Q6PG37 636 aa7.34□□□□□ -1.23
PTPN12-209ENST00000460731 SMARCC1Q92922 1105 aaPredicted RBP7.34□□□□□ -1.23
PTPN12-209ENST00000460731 THUMPD2Q9BTF0 503 aaKnown RBP7.34□□□□□ -1.23
PTPN12-209ENST00000460731 TMOD3Q9NYL9 352 aa7.34□□□□□ -1.23
PTPN12-209ENST00000460731 NHSQ6T4R5 1651 aa7.34□□□□□ -1.23
PTPN12-209ENST00000460731 VIRMAQ69YN4 1812 aaKnown RBP7.34□□□□□ -1.24
PTPN12-209ENST00000460731 SOS1Q07889 1333 aaPredicted RBP7.33□□□□□ -1.24
PTPN12-209ENST00000460731 ZNF831Q5JPB2 1677 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 ZBTB42B2RXF5 422 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 DLL1O00548 723 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 PAX4O43316 350 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 TRIM37O94972 964 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 ATP1A2P50993 1020 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 EIF4A1P60842 406 aaKnown RBP7.33□□□□□ -1.24
PTPN12-209ENST00000460731 GNAI1P63096 354 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 TEFQ10587 303 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 FAM35AQ86V20 835 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 LARGE2Q8N3Y3 721 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 TRPM4Q8TD43 1214 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 CAMKK2Q96RR4 588 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 PCMTD2Q9NV79 361 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 ASAP1Q9ULH1 1129 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 BCS1LQ9Y276 419 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 COG6Q9Y2V7 657 aa7.33□□□□□ -1.24
PTPN12-209ENST00000460731 E9PSI1 815 aa7.32□□□□□ -1.24
PTPN12-209ENST00000460731 PPP1R12BO60237 982 aaPredicted RBP7.32□□□□□ -1.24
PTPN12-209ENST00000460731 HOXB7P09629 217 aa7.32□□□□□ -1.24
PTPN12-209ENST00000460731 FSTP19883 344 aa7.32□□□□□ -1.24
PTPN12-209ENST00000460731 HMGB2P26583 209 aaKnown RBP7.32□□□□□ -1.24
PTPN12-209ENST00000460731 TXKP42681 527 aa7.32□□□□□ -1.24
PTPN12-209ENST00000460731 PCSK7Q16549 785 aa7.32□□□□□ -1.24
PTPN12-209ENST00000460731 PERM1Q5SV97 790 aa7.32□□□□□ -1.24
PTPN12-209ENST00000460731 DUSP27Q5VZP5 1158 aa7.32□□□□□ -1.24
PTPN12-209ENST00000460731 SIX5Q8N196 739 aa7.32□□□□□ -1.24
PTPN12-209ENST00000460731 TSEN2Q8NCE0 465 aaKnown RBP7.32□□□□□ -1.24
PTPN12-209ENST00000460731 ACSBG1Q96GR2 724 aa7.32□□□□□ -1.24
PTPN12-209ENST00000460731 PAPPAQ13219 1627 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 CICQ96RK0 1608 aaPredicted RBP7.31□□□□□ -1.24
PTPN12-209ENST00000460731 UBR2Q8IWV8 1755 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 TGFBR3LH3BV60 316 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 KCNQ3O43525 872 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 CPB1P15086 417 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 HNRNPUQ00839 825 aaKnown RBP eCLIP7.31□□□□□ -1.24
PTPN12-209ENST00000460731 WFDC8Q8IUA0 241 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 DOT1LQ8TEK3 1739 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 ZNF496Q96IT1 587 aaPredicted RBP7.31□□□□□ -1.24
PTPN12-209ENST00000460731 PNMA5Q96PV4 448 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 ZFATQ9P243 1243 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 BTAF1O14981 1849 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 KCPQ6ZWJ8 1503 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 RGPD3A6NKT7 1758 aaPredicted RBP7.31□□□□□ -1.24
PTPN12-209ENST00000460731 KDM3BQ7LBC6 1761 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 RGPD4Q7Z3J3 1758 aa7.31□□□□□ -1.24
PTPN12-209ENST00000460731 TNS1Q9HBL0 1735 aaKnown RBP7.3□□□□□ -1.24
PTPN12-209ENST00000460731 LOC102724428A0A0B4J2F2 783 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms