RNA–Protein interactions for RNA: ENST00000460345.1

TNC-204, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-204ENST00000460345 ANP32AP39687 249 aaKnown RBP11.62□□□□□ -0.55
TNC-204ENST00000460345 NEK4P51957 841 aa11.62□□□□□ -0.55
TNC-204ENST00000460345 EAPPQ56P03 285 aaPredicted RBP11.62□□□□□ -0.55
TNC-204ENST00000460345 USP50Q70EL3 339 aaPredicted RBP11.62□□□□□ -0.55
TNC-204ENST00000460345 SH3BP5LQ7L8J4 393 aa11.62□□□□□ -0.55
TNC-204ENST00000460345 FAM83AQ86UY5 434 aa11.62□□□□□ -0.55
TNC-204ENST00000460345 APOBEC3FQ8IUX4 373 aaKnown RBP11.62□□□□□ -0.55
TNC-204ENST00000460345 TRIM34Q9BYJ4 488 aa11.62□□□□□ -0.55
TNC-204ENST00000460345 KRT23Q9C075 422 aa11.62□□□□□ -0.55
TNC-204ENST00000460345 CNNM2Q9H8M5 875 aa11.62□□□□□ -0.55
TNC-204ENST00000460345 MKNK2Q9HBH9 465 aa11.62□□□□□ -0.55
TNC-204ENST00000460345 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
TNC-204ENST00000460345 GGA3Q9NZ52 723 aa11.62□□□□□ -0.55
TNC-204ENST00000460345 PI4KBQ9UBF8 816 aa11.62□□□□□ -0.55
TNC-204ENST00000460345 MYH1P12882 1939 aa11.62□□□□□ -0.55
TNC-204ENST00000460345 NEDD4P46934 1319 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 B4E1Z4 1266 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 PRDM1O75626 825 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 HMGB1P09429 215 aaKnown RBP11.61□□□□□ -0.55
TNC-204ENST00000460345 RASA3Q14644 834 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 RUFY3Q7L099 469 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 CRACR2BQ8N4Y2 399 aaPredicted RBP11.61□□□□□ -0.55
TNC-204ENST00000460345 CSRNP1Q96S65 589 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 TMEM39BQ9GZU3 492 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 TAF1DQ9H5J8 278 aaPredicted RBP11.61□□□□□ -0.55
TNC-204ENST00000460345 ZNF287Q9HBT7 754 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 PDRG1Q9NUG6 133 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 SERPINB13Q9UIV8 391 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 TACC3Q9Y6A5 838 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 CNTNAP1P78357 1384 aa11.61□□□□□ -0.55
TNC-204ENST00000460345 FOCADQ5VW36 1801 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 ST18O60284 1047 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 RANBP6O60518 1105 aaKnown RBP11.6□□□□□ -0.55
TNC-204ENST00000460345 KDM4AO75164 1064 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 PCP11498 1178 aaKnown RBP11.6□□□□□ -0.55
TNC-204ENST00000460345 RPS6KB1P23443 525 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 MCM5P33992 734 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 CDK8P49336 464 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 FGD1P98174 961 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 C16orf86Q6ZW13 317 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 DHX32Q7L7V1 743 aaKnown RBP11.6□□□□□ -0.55
TNC-204ENST00000460345 CHST3Q7LGC8 479 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 FOXP4Q8IVH2 680 aaPredicted RBP11.6□□□□□ -0.55
TNC-204ENST00000460345 ZNF444Q8N0Y2 327 aaPredicted RBP11.6□□□□□ -0.55
TNC-204ENST00000460345 SLC44A5Q8NCS7 719 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 ESR2Q92731 530 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 DCPSQ96C86 337 aaKnown RBP11.6□□□□□ -0.55
TNC-204ENST00000460345 TCEANC2Q96MN5 208 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 DEFB129Q9H1M3 183 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 RRAGCQ9HB90 399 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 CLEC11AQ9Y240 323 aa11.6□□□□□ -0.55
TNC-204ENST00000460345 ATRNL1Q5VV63 1379 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 ROBO3Q96MS0 1386 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 LAMA4Q16363 1823 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 POTECB2RU33 542 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 PRC1O43663 620 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 ORC4O43929 436 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 FGRP09769 529 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 VEGFAP15692 232 aaPredicted RBP11.59□□□□□ -0.55
TNC-204ENST00000460345 GABPAQ06546 454 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 COL9A3Q14050 684 aaPredicted RBP11.59□□□□□ -0.55
TNC-204ENST00000460345 PNMA8AQ86V59 439 aaPredicted RBP11.59□□□□□ -0.55
TNC-204ENST00000460345 MB21D2Q8IYB1 491 aaPredicted RBP11.59□□□□□ -0.55
TNC-204ENST00000460345 ZNF526Q8TF50 670 aaPredicted RBP11.59□□□□□ -0.55
TNC-204ENST00000460345 LRRC2Q9BYS8 371 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 EHD4Q9H223 541 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 SWAP70Q9UH65 585 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.59□□□□□ -0.55
TNC-204ENST00000460345 PITPNM2Q9BZ72 1349 aa11.59□□□□□ -0.55
TNC-204ENST00000460345 COL2A1P02458 1487 aaPredicted RBP11.58□□□□□ -0.56
TNC-204ENST00000460345 TSPY2A6NKD2 308 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 FAM196BA6NMK8 535 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 SLURP2P0DP57 97 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 EXOSC10Q01780 885 aaKnown RBP11.58□□□□□ -0.56
TNC-204ENST00000460345 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
TNC-204ENST00000460345 FAM47AQ5JRC9 791 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 Q6ZUG5 572 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 NOL8Q76FK4 1167 aaKnown RBP11.58□□□□□ -0.56
TNC-204ENST00000460345 CYB5R4Q7L1T6 521 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 SULF1Q8IWU6 871 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 IL27Q8NEV9 243 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 NKX2-3Q8TAU0 364 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
TNC-204ENST00000460345 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.58□□□□□ -0.56
TNC-204ENST00000460345 ZSWIM5Q9P217 1185 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 LAMB1P07942 1786 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 UTRNP46939 3433 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 SCN4AP35499 1836 aa11.58□□□□□ -0.56
TNC-204ENST00000460345 DDX60LQ5H9U9 1706 aaKnown RBP11.57□□□□□ -0.56
TNC-204ENST00000460345 WDR90Q96KV7 1748 aa11.57□□□□□ -0.56
TNC-204ENST00000460345 TSPY3P0CV98 308 aa11.57□□□□□ -0.56
TNC-204ENST00000460345 TSPY8P0CW00 308 aa11.57□□□□□ -0.56
TNC-204ENST00000460345 RASA1P20936 1047 aa11.57□□□□□ -0.56
TNC-204ENST00000460345 AK2P54819 239 aa11.57□□□□□ -0.56
TNC-204ENST00000460345 ANTXR2P58335 489 aa11.57□□□□□ -0.56
TNC-204ENST00000460345 TFAP4Q01664 338 aa11.57□□□□□ -0.56
TNC-204ENST00000460345 BECN1Q14457 450 aa11.57□□□□□ -0.56
TNC-204ENST00000460345 PRAMEF18Q5VWM3 479 aa11.57□□□□□ -0.56
TNC-204ENST00000460345 MIGA2Q7L4E1 593 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms