RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 ALX1Q15699 326 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 SBK1Q52WX2 424 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 NBPF12Q5TAG4 269 aaPredicted RBP12.24□□□□□ -0.45
GARNL3-211ENST00000460176 PRAMEF18Q5VWM3 479 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 CTR9Q6PD62 1173 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 SMC1BQ8NDV3 1235 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 FAM212AQ96EL1 285 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 NACAP1Q9BZK3 213 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 DHX36Q9H2U1 1008 aaKnown RBP12.24□□□□□ -0.45
GARNL3-211ENST00000460176 ARPP21Q9UBL0 812 aaPredicted RBP12.24□□□□□ -0.45
GARNL3-211ENST00000460176 PALD1Q9ULE6 856 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 ROBO3Q96MS0 1386 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 CYP2D7A0A087X1C5 515 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 USP17L12C9JPN9 530 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 USP17L21D6R901 530 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 SMIM22K7EJ46 135 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 FGAP02671 866 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 SLC4A8Q2Y0W8 1093 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 C12orf60Q5U649 245 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 ZSCAN29Q8IWY8 852 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-211ENST00000460176 DDRGK1Q96HY6 314 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 CSRNP1Q96S65 589 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 NAPBQ9H115 298 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 ANO2Q9NQ90 1003 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 ATAD5Q96QE3 1844 aa12.23□□□□□ -0.45
GARNL3-211ENST00000460176 PASKQ96RG2 1323 aa12.22□□□□□ -0.45
GARNL3-211ENST00000460176 POLR3DP05423 398 aaPredicted RBP12.22□□□□□ -0.45
GARNL3-211ENST00000460176 SLURP2P0DP57 97 aa12.22□□□□□ -0.45
GARNL3-211ENST00000460176 PLCD1P51178 756 aa12.22□□□□□ -0.45
GARNL3-211ENST00000460176 KIAA1211Q6ZU35 1233 aa12.22□□□□□ -0.45
GARNL3-211ENST00000460176 METTL16Q86W50 562 aaKnown RBP12.22□□□□□ -0.45
GARNL3-211ENST00000460176 HS6ST3Q8IZP7 471 aa12.22□□□□□ -0.45
GARNL3-211ENST00000460176 MAP4K1Q92918 833 aa12.22□□□□□ -0.45
GARNL3-211ENST00000460176 EHD4Q9H223 541 aa12.22□□□□□ -0.45
GARNL3-211ENST00000460176 PI4KBQ9UBF8 816 aa12.22□□□□□ -0.45
GARNL3-211ENST00000460176 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.45
GARNL3-211ENST00000460176 SEC24BO95487 1268 aa12.21□□□□□ -0.45
GARNL3-211ENST00000460176 HLA-DOAP06340 250 aa12.21□□□□□ -0.45
GARNL3-211ENST00000460176 MAP3K10Q02779 954 aa12.21□□□□□ -0.45
GARNL3-211ENST00000460176 GABPAQ06546 454 aa12.21□□□□□ -0.45
GARNL3-211ENST00000460176 FSTL1Q12841 308 aa12.21□□□□□ -0.45
GARNL3-211ENST00000460176 SUPT20HL1Q3ZLR7 823 aa12.21□□□□□ -0.45
GARNL3-211ENST00000460176 TTC6Q86TZ1 520 aa12.21□□□□□ -0.45
GARNL3-211ENST00000460176 NBPF3Q9H094 633 aa12.21□□□□□ -0.45
GARNL3-211ENST00000460176 DNAJC18Q9H819 358 aa12.21□□□□□ -0.45
GARNL3-211ENST00000460176 ANAPC4Q9UJX5 808 aa12.21□□□□□ -0.45
GARNL3-211ENST00000460176 RBM8AQ9Y5S9 174 aaKnown RBP12.21□□□□□ -0.45
GARNL3-211ENST00000460176 DOCK1Q14185 1865 aa12.21□□□□□ -0.46
GARNL3-211ENST00000460176 TBC1D12O60347 775 aa12.2□□□□□ -0.46
GARNL3-211ENST00000460176 REC8O95072 547 aa12.2□□□□□ -0.46
GARNL3-211ENST00000460176 PPARAQ07869 468 aa12.2□□□□□ -0.46
GARNL3-211ENST00000460176 FOXP4Q8IVH2 680 aaPredicted RBP12.2□□□□□ -0.46
GARNL3-211ENST00000460176 AMOTL1Q8IY63 956 aa12.2□□□□□ -0.46
GARNL3-211ENST00000460176 HOOK2Q96ED9 719 aa12.2□□□□□ -0.46
GARNL3-211ENST00000460176 CTNNA3Q9UI47 895 aa12.2□□□□□ -0.46
GARNL3-211ENST00000460176 SERPINB13Q9UIV8 391 aa12.2□□□□□ -0.46
GARNL3-211ENST00000460176 GREB1LQ9C091 1923 aaPredicted RBP12.19□□□□□ -0.46
GARNL3-211ENST00000460176 FAM196BA6NMK8 535 aa12.19□□□□□ -0.46
GARNL3-211ENST00000460176 HAND2P61296 217 aa12.19□□□□□ -0.46
GARNL3-211ENST00000460176 NECTIN1Q15223 517 aa12.19□□□□□ -0.46
GARNL3-211ENST00000460176 CST9Q5W186 159 aa12.19□□□□□ -0.46
GARNL3-211ENST00000460176 C16orf86Q6ZW13 317 aa12.19□□□□□ -0.46
GARNL3-211ENST00000460176 MIGA2Q7L4E1 593 aa12.19□□□□□ -0.46
GARNL3-211ENST00000460176 DYNLL2Q96FJ2 89 aa12.19□□□□□ -0.46
GARNL3-211ENST00000460176 HERC5Q9UII4 1024 aaKnown RBP12.19□□□□□ -0.46
GARNL3-211ENST00000460176 FZD1Q9UP38 647 aa12.19□□□□□ -0.46
GARNL3-211ENST00000460176 TACC3Q9Y6A5 838 aa12.19□□□□□ -0.46
GARNL3-211ENST00000460176 PHF20L1A8MW92 1017 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 ZNF213O14771 459 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 EPB41L2O43491 1005 aaKnown RBP12.18□□□□□ -0.46
GARNL3-211ENST00000460176 USP2O75604 605 aaPredicted RBP12.18□□□□□ -0.46
GARNL3-211ENST00000460176 CYP21A2P08686 494 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 SHMT1P34896 483 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 NF2P35240 595 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 CTDSPL2Q05D32 466 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 IMMTQ16891 758 aaKnown RBP12.18□□□□□ -0.46
GARNL3-211ENST00000460176 DCAF15Q66K64 600 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 TBC1D10CQ8IV04 446 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 CRACR2BQ8N4Y2 399 aaPredicted RBP12.18□□□□□ -0.46
GARNL3-211ENST00000460176 SLC44A5Q8NCS7 719 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 USP26Q9BXU7 913 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 ZNF341Q9BYN7 854 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 ZNF408Q9H9D4 720 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.18□□□□□ -0.46
GARNL3-211ENST00000460176 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
GARNL3-211ENST00000460176 TAF6LQ9Y6J9 622 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 PHIPQ8WWQ0 1821 aa12.18□□□□□ -0.46
GARNL3-211ENST00000460176 SLC27A2O14975 620 aa12.17□□□□□ -0.46
GARNL3-211ENST00000460176 EIF5BO60841 1220 aaKnown RBP12.17□□□□□ -0.46
GARNL3-211ENST00000460176 CELF2O95319 508 aaKnown RBP12.17□□□□□ -0.46
GARNL3-211ENST00000460176 CDK8P49336 464 aa12.17□□□□□ -0.46
GARNL3-211ENST00000460176 PRKG1Q13976 671 aa12.17□□□□□ -0.46
GARNL3-211ENST00000460176 RRP1BQ14684 758 aaKnown RBP12.17□□□□□ -0.46
GARNL3-211ENST00000460176 MAP3K11Q16584 847 aa12.17□□□□□ -0.46
GARNL3-211ENST00000460176 CREB3L3Q68CJ9 461 aa12.17□□□□□ -0.46
GARNL3-211ENST00000460176 TATDN1Q6P1N9 297 aa12.17□□□□□ -0.46
GARNL3-211ENST00000460176 MOB2Q70IA6 237 aa12.17□□□□□ -0.46
GARNL3-211ENST00000460176 STK11IPQ8N1F8 1099 aa12.17□□□□□ -0.46
GARNL3-211ENST00000460176 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.17□□□□□ -0.46
GARNL3-211ENST00000460176 INCENPQ9NQS7 918 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms