RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 ZFYVE28Q9HCC9 887 aa28.79■■■□□ 2.2
HOXB3-202ENST00000460160 ZHX2Q9Y6X8 837 aa28.79■■■□□ 2.2
HOXB3-202ENST00000460160 PKN2Q16513 984 aaKnown RBP28.78■■■□□ 2.2
HOXB3-202ENST00000460160 EDC3Q96F86 508 aaKnown RBP28.78■■■□□ 2.2
HOXB3-202ENST00000460160 PI4KBQ9UBF8 816 aa28.78■■■□□ 2.2
HOXB3-202ENST00000460160 CXCL11O14625 94 aa28.77■■■□□ 2.2
HOXB3-202ENST00000460160 PDE6AP16499 860 aa28.77■■■□□ 2.2
HOXB3-202ENST00000460160 CERS3Q8IU89 383 aa28.77■■■□□ 2.2
HOXB3-202ENST00000460160 BOLA2Q9H3K6 86 aa28.77■■■□□ 2.2
HOXB3-202ENST00000460160 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.77■■■□□ 2.2
HOXB3-202ENST00000460160 HERC5Q9UII4 1024 aaKnown RBP28.77■■■□□ 2.2
HOXB3-202ENST00000460160 SLC9C2Q5TAH2 1124 aa28.76■■■□□ 2.19
HOXB3-202ENST00000460160 AFG3L2Q9Y4W6 797 aa28.76■■■□□ 2.19
HOXB3-202ENST00000460160 RRP1BQ14684 758 aaKnown RBP28.75■■■□□ 2.19
HOXB3-202ENST00000460160 ANKRD23Q86SG2 305 aa28.75■■■□□ 2.19
HOXB3-202ENST00000460160 RIOK1Q9BRS2 568 aaKnown RBP28.75■■■□□ 2.19
HOXB3-202ENST00000460160 PALD1Q9ULE6 856 aa28.75■■■□□ 2.19
HOXB3-202ENST00000460160 MYH7P12883 1935 aa28.75■■■□□ 2.19
HOXB3-202ENST00000460160 SP3Q02447 781 aa28.74■■■□□ 2.19
HOXB3-202ENST00000460160 HAUS7Q99871 368 aa28.74■■■□□ 2.19
HOXB3-202ENST00000460160 PAG1Q9NWQ8 432 aa28.74■■■□□ 2.19
HOXB3-202ENST00000460160 SAP30BPQ9UHR5 308 aaKnown RBP28.74■■■□□ 2.19
HOXB3-202ENST00000460160 CCDC84Q86UT8 332 aaPredicted RBP28.74■■■□□ 2.19
HOXB3-202ENST00000460160 METTL16Q86W50 562 aaKnown RBP28.74■■■□□ 2.19
HOXB3-202ENST00000460160 CD99L2Q8TCZ2 262 aa28.74■■■□□ 2.19
HOXB3-202ENST00000460160 ERO1AQ96HE7 468 aa28.74■■■□□ 2.19
HOXB3-202ENST00000460160 CRBNQ96SW2 442 aa28.74■■■□□ 2.19
HOXB3-202ENST00000460160 A0A0G2JLL6 359 aaPredicted RBP28.73■■■□□ 2.19
HOXB3-202ENST00000460160 TCRBV5S4A2TA0A5A2 114 aa28.73■■■□□ 2.19
HOXB3-202ENST00000460160 CAP1Q01518 475 aa28.73■■■□□ 2.19
HOXB3-202ENST00000460160 PRRT2Q7Z6L0 340 aaPredicted RBP28.73■■■□□ 2.19
HOXB3-202ENST00000460160 DNAJC18Q9H819 358 aa28.73■■■□□ 2.19
HOXB3-202ENST00000460160 HPS5Q9UPZ3 1129 aa28.73■■■□□ 2.19
HOXB3-202ENST00000460160 ZNF532Q9HCE3 1301 aa28.72■■■□□ 2.19
HOXB3-202ENST00000460160 PDHXO00330 501 aa28.72■■■□□ 2.19
HOXB3-202ENST00000460160 TLR2O60603 784 aa28.72■■■□□ 2.19
HOXB3-202ENST00000460160 CAP2P40123 477 aa28.72■■■□□ 2.19
HOXB3-202ENST00000460160 FBXO46Q6PJ61 603 aaPredicted RBP28.72■■■□□ 2.19
HOXB3-202ENST00000460160 OTOP1Q7RTM1 612 aa28.72■■■□□ 2.19
HOXB3-202ENST00000460160 TRIM17Q9Y577 477 aa28.72■■■□□ 2.19
HOXB3-202ENST00000460160 USP5P45974 858 aa28.71■■■□□ 2.19
HOXB3-202ENST00000460160 DDX60LQ5H9U9 1706 aaKnown RBP28.71■■■□□ 2.19
HOXB3-202ENST00000460160 GPAT2Q6NUI2 795 aa28.71■■■□□ 2.19
HOXB3-202ENST00000460160 MAGEB6P1A0A0J9YX57 407 aa28.7■■■□□ 2.19
HOXB3-202ENST00000460160 SLC4A8Q2Y0W8 1093 aa28.7■■■□□ 2.19
HOXB3-202ENST00000460160 FOXP4Q8IVH2 680 aaPredicted RBP28.7■■■□□ 2.19
HOXB3-202ENST00000460160 NAV1Q8NEY1 1877 aa28.7■■■□□ 2.18
HOXB3-202ENST00000460160 TRIM75PA6NK02 468 aa28.69■■■□□ 2.18
HOXB3-202ENST00000460160 ECHDC1Q9NTX5 307 aa28.69■■■□□ 2.18
HOXB3-202ENST00000460160 HLA-DOAP06340 250 aa28.69■■■□□ 2.18
HOXB3-202ENST00000460160 FASTKD5Q7L8L6 764 aaKnown RBP28.69■■■□□ 2.18
HOXB3-202ENST00000460160 CRACR2BQ8N4Y2 399 aaPredicted RBP28.69■■■□□ 2.18
HOXB3-202ENST00000460160 ADGRA2Q96PE1 1338 aa28.68■■■□□ 2.18
HOXB3-202ENST00000460160 ZSWIM8A7E2V4 1837 aa28.68■■■□□ 2.18
HOXB3-202ENST00000460160 ADD2P35612 726 aa28.67■■■□□ 2.18
HOXB3-202ENST00000460160 SLFNL1Q499Z3 407 aa28.67■■■□□ 2.18
HOXB3-202ENST00000460160 EFCC1Q9HA90 598 aa28.67■■■□□ 2.18
HOXB3-202ENST00000460160 JAG1P78504 1218 aa28.66■■■□□ 2.18
HOXB3-202ENST00000460160 C17orf99Q6UX52 265 aa28.66■■■□□ 2.18
HOXB3-202ENST00000460160 GADL1Q6ZQY3 521 aa28.66■■■□□ 2.18
HOXB3-202ENST00000460160 TRIM34Q9BYJ4 488 aa28.66■■■□□ 2.18
HOXB3-202ENST00000460160 LOC285556D6RIA3 1793 aa28.66■■■□□ 2.18
HOXB3-202ENST00000460160 SHROOM1Q2M3G4 852 aaPredicted RBP28.65■■■□□ 2.18
HOXB3-202ENST00000460160 ZNF280CQ8ND82 737 aa28.65■■■□□ 2.18
HOXB3-202ENST00000460160 CRNKL1Q9BZJ0 848 aaKnown RBP28.65■■■□□ 2.18
HOXB3-202ENST00000460160 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.65■■■□□ 2.183e-8■■□□□ 14.5
HOXB3-202ENST00000460160 USP17L5A8MUK1 530 aa28.64■■■□□ 2.18
HOXB3-202ENST00000460160 CHGBP05060 677 aa28.64■■■□□ 2.18
HOXB3-202ENST00000460160 SPP2Q13103 211 aa28.64■■■□□ 2.18
HOXB3-202ENST00000460160 TSHZ3Q63HK5 1081 aa28.64■■■□□ 2.18
HOXB3-202ENST00000460160 LCORLQ8N3X6 602 aa28.64■■■□□ 2.18
HOXB3-202ENST00000460160 PARK7Q99497 189 aaKnown RBP28.64■■■□□ 2.18
HOXB3-202ENST00000460160 TBC1D2Q9BYX2 928 aa28.64■■■□□ 2.18
HOXB3-202ENST00000460160 CPA4Q9UI42 421 aa28.64■■■□□ 2.18
HOXB3-202ENST00000460160 ASNSP08243 561 aa28.64■■■□□ 2.17
HOXB3-202ENST00000460160 CYP2C8P10632 490 aa28.64■■■□□ 2.17
HOXB3-202ENST00000460160 GPATCH3Q96I76 525 aa28.64■■■□□ 2.17
HOXB3-202ENST00000460160 EHD4Q9H223 541 aa28.64■■■□□ 2.17
HOXB3-202ENST00000460160 GDF11O95390 407 aa28.63■■■□□ 2.17
HOXB3-202ENST00000460160 LACTBP83111 547 aaPredicted RBP28.63■■■□□ 2.17
HOXB3-202ENST00000460160 SERPINB13Q9UIV8 391 aa28.63■■■□□ 2.17
HOXB3-202ENST00000460160 PTPN22Q9Y2R2 807 aa28.63■■■□□ 2.17
HOXB3-202ENST00000460160 SLC45A1Q9Y2W3 748 aa28.63■■■□□ 2.17
HOXB3-202ENST00000460160 TNRC18O15417 2968 aaPredicted RBP28.62■■■□□ 2.17
HOXB3-202ENST00000460160 TTC6Q86TZ1 520 aa28.62■■■□□ 2.17
HOXB3-202ENST00000460160 SDR42E1Q8WUS8 393 aa28.62■■■□□ 2.17
HOXB3-202ENST00000460160 ARHGAP39Q9C0H5 1083 aa28.62■■■□□ 2.17
HOXB3-202ENST00000460160 ARMT1Q9H993 441 aa28.62■■■□□ 2.17
HOXB3-202ENST00000460160 BAZ2AQ9UIF9 1905 aaKnown RBP28.62■■■□□ 2.17
HOXB3-202ENST00000460160 BRCA2P51587 3418 aa28.62■■■□□ 2.17
HOXB3-202ENST00000460160 KIAA0100Q14667 2235 aaKnown RBP28.62■■■□□ 2.17
HOXB3-202ENST00000460160 MBD4O95243 580 aa28.61■■■□□ 2.17
HOXB3-202ENST00000460160 RGS19P49795 217 aa28.61■■■□□ 2.17
HOXB3-202ENST00000460160 PLCD1P51178 756 aa28.61■■■□□ 2.17
HOXB3-202ENST00000460160 UBE3CQ15386 1083 aa28.61■■■□□ 2.17
HOXB3-202ENST00000460160 TATDN1Q6P1N9 297 aa28.61■■■□□ 2.17
HOXB3-202ENST00000460160 WDR18Q9BV38 432 aa28.61■■■□□ 2.17
HOXB3-202ENST00000460160 ZBTB21Q9ULJ3 1066 aa28.61■■■□□ 2.17
HOXB3-202ENST00000460160 AGTPBP1Q9UPW5 1226 aa28.61■■■□□ 2.17
HOXB3-202ENST00000460160 TREML2Q5T2D2 321 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms