RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 MLLT1Q03111 559 aaPredicted RBP18.94■□□□□ 0.62
SDF4-204ENST00000459994 RRP1BQ14684 758 aaKnown RBP18.94■□□□□ 0.62
SDF4-204ENST00000459994 ZNF512BQ96KM6 892 aaPredicted RBP18.94■□□□□ 0.62
SDF4-204ENST00000459994 ANTXR1Q9H6X2 564 aa18.94■□□□□ 0.62
SDF4-204ENST00000459994 ZFYVE28Q9HCC9 887 aa18.94■□□□□ 0.62
SDF4-204ENST00000459994 AATFQ9NY61 560 aaKnown RBP eCLIP18.94■□□□□ 0.62
SDF4-204ENST00000459994 ECM2O94769 699 aaPredicted RBP18.93■□□□□ 0.62
SDF4-204ENST00000459994 LDHCP07864 332 aa18.93■□□□□ 0.62
SDF4-204ENST00000459994 IFIT2P09913 472 aaKnown RBP18.93■□□□□ 0.62
SDF4-204ENST00000459994 GSTO1P78417 241 aa18.93■□□□□ 0.62
SDF4-204ENST00000459994 NAA16Q6N069 864 aaPredicted RBP18.93■□□□□ 0.62
SDF4-204ENST00000459994 SCYL3Q8IZE3 742 aa18.93■□□□□ 0.62
SDF4-204ENST00000459994 ERO1AQ96HE7 468 aa18.93■□□□□ 0.62
SDF4-204ENST00000459994 OSBPL5Q9H0X9 879 aaPredicted RBP18.93■□□□□ 0.62
SDF4-204ENST00000459994 MYH7P12883 1935 aa18.93■□□□□ 0.62
SDF4-204ENST00000459994 DDX60LQ5H9U9 1706 aaKnown RBP18.93■□□□□ 0.62
SDF4-204ENST00000459994 COL2A1P02458 1487 aaPredicted RBP18.92■□□□□ 0.62
SDF4-204ENST00000459994 PTPRAP18433 802 aa18.92■□□□□ 0.62
SDF4-204ENST00000459994 CTGFP29279 349 aa18.92■□□□□ 0.62
SDF4-204ENST00000459994 DYNLL1P63167 89 aaKnown RBP18.92■□□□□ 0.62
SDF4-204ENST00000459994 GPAT2Q6NUI2 795 aa18.92■□□□□ 0.62
SDF4-204ENST00000459994 TEX11Q8IYF3 940 aa18.92■□□□□ 0.62
SDF4-204ENST00000459994 PTPN22Q9Y2R2 807 aa18.92■□□□□ 0.62
SDF4-204ENST00000459994 ADGRA2Q96PE1 1338 aa18.92■□□□□ 0.62
SDF4-204ENST00000459994 SALL3Q9BXA9 1300 aa18.92■□□□□ 0.62
SDF4-204ENST00000459994 NAV1Q8NEY1 1877 aa18.92■□□□□ 0.62
SDF4-204ENST00000459994 TLR2O60603 784 aa18.91■□□□□ 0.62
SDF4-204ENST00000459994 PDE4AP27815 886 aa18.91■□□□□ 0.62
SDF4-204ENST00000459994 ZHX2Q9Y6X8 837 aa18.91■□□□□ 0.62
SDF4-204ENST00000459994 BRCA2P51587 3418 aa18.9■□□□□ 0.62
SDF4-204ENST00000459994 PDHXO00330 501 aa18.9■□□□□ 0.62
SDF4-204ENST00000459994 NPM3O75607 178 aaKnown RBP18.9■□□□□ 0.62
SDF4-204ENST00000459994 ANKRD23Q86SG2 305 aa18.9■□□□□ 0.62
SDF4-204ENST00000459994 BCL11AQ9H165 835 aa18.9■□□□□ 0.62
SDF4-204ENST00000459994 EFCC1Q9HA90 598 aa18.9■□□□□ 0.62
SDF4-204ENST00000459994 STAP2Q9UGK3 403 aa18.9■□□□□ 0.62
SDF4-204ENST00000459994 CPA4Q9UI42 421 aa18.9■□□□□ 0.62
SDF4-204ENST00000459994 AFG3L2Q9Y4W6 797 aa18.9■□□□□ 0.62
SDF4-204ENST00000459994 DOCK3Q8IZD9 2030 aa18.9■□□□□ 0.62
SDF4-204ENST00000459994 JAG1P78504 1218 aa18.89■□□□□ 0.61
SDF4-204ENST00000459994 SHROOM1Q2M3G4 852 aaPredicted RBP18.89■□□□□ 0.61
SDF4-204ENST00000459994 MAPKAPK5Q8IW41 473 aa18.89■□□□□ 0.61
SDF4-204ENST00000459994 PLEKHM2Q8IWE5 1019 aa18.89■□□□□ 0.61
SDF4-204ENST00000459994 OTUD7AQ8TE49 926 aaPredicted RBP18.89■□□□□ 0.61
SDF4-204ENST00000459994 TGFBRAP1Q8WUH2 860 aa18.89■□□□□ 0.61
SDF4-204ENST00000459994 OSBPL3Q9H4L5 887 aa18.89■□□□□ 0.61
SDF4-204ENST00000459994 DNAJC18Q9H819 358 aa18.89■□□□□ 0.61
SDF4-204ENST00000459994 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.89■□□□□ 0.61
SDF4-204ENST00000459994 TBC1D12O60347 775 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 CTNND1O60716 968 aaKnown RBP18.88■□□□□ 0.61
SDF4-204ENST00000459994 CYP2C8P10632 490 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 MX1P20591 662 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 PPP4CP60510 307 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 SLC4A8Q2Y0W8 1093 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 C17orf99Q6UX52 265 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 MIGA1Q8NAN2 632 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 GPATCH3Q96I76 525 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 ZCCHC17Q9NP64 241 aaKnown RBP18.88■□□□□ 0.61
SDF4-204ENST00000459994 ECHDC1Q9NTX5 307 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 PTCH2Q9Y6C5 1203 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 FLT1P17948 1338 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 TTC41PQ6P2S7 1318 aa18.88■□□□□ 0.61
SDF4-204ENST00000459994 A0A0G2JLL6 359 aaPredicted RBP18.87■□□□□ 0.61
SDF4-204ENST00000459994 IDH1O75874 414 aaKnown RBP18.87■□□□□ 0.61
SDF4-204ENST00000459994 CYP7A1P22680 504 aa18.87■□□□□ 0.61
SDF4-204ENST00000459994 PDE1AP54750 535 aa18.87■□□□□ 0.61
SDF4-204ENST00000459994 LACTBP83111 547 aaPredicted RBP18.87■□□□□ 0.61
SDF4-204ENST00000459994 PRRT2Q7Z6L0 340 aaPredicted RBP18.87■□□□□ 0.61
SDF4-204ENST00000459994 PICK1Q9NRD5 415 aa18.87■□□□□ 0.61
SDF4-204ENST00000459994 BAZ2AQ9UIF9 1905 aaKnown RBP18.87■□□□□ 0.61
SDF4-204ENST00000459994 POTEFA5A3E0 1075 aa18.86■□□□□ 0.61
SDF4-204ENST00000459994 TRIM75PA6NK02 468 aa18.86■□□□□ 0.61
SDF4-204ENST00000459994 CXCL11O14625 94 aa18.86■□□□□ 0.61
SDF4-204ENST00000459994 MAP4K4O95819 1239 aaPredicted RBP18.86■□□□□ 0.61
SDF4-204ENST00000459994 GADL1Q6ZQY3 521 aa18.86■□□□□ 0.61
SDF4-204ENST00000459994 MAGEB6Q8N7X4 407 aa18.86■□□□□ 0.61
SDF4-204ENST00000459994 EDC3Q96F86 508 aaKnown RBP18.86■□□□□ 0.61
SDF4-204ENST00000459994 SAP30BPQ9UHR5 308 aaKnown RBP18.86■□□□□ 0.61
SDF4-204ENST00000459994 PALD1Q9ULE6 856 aa18.86■□□□□ 0.61
SDF4-204ENST00000459994 MYH8P13535 1937 aa18.85■□□□□ 0.61
SDF4-204ENST00000459994 ATP5JP18859 108 aa18.85■□□□□ 0.61
SDF4-204ENST00000459994 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.85■□□□□ 0.61
SDF4-204ENST00000459994 NOL10Q9BSC4 688 aaKnown RBP18.85■□□□□ 0.61
SDF4-204ENST00000459994 ERC2O15083 957 aa18.84■□□□□ 0.61
SDF4-204ENST00000459994 BAG3O95817 575 aa18.84■□□□□ 0.61
SDF4-204ENST00000459994 CAP2P40123 477 aa18.84■□□□□ 0.61
SDF4-204ENST00000459994 SLFNL1Q499Z3 407 aa18.84■□□□□ 0.61
SDF4-204ENST00000459994 TREML2Q5T2D2 321 aa18.84■□□□□ 0.61
SDF4-204ENST00000459994 SKAP1Q86WV1 359 aa18.84■□□□□ 0.61
SDF4-204ENST00000459994 KIAA0100Q14667 2235 aaKnown RBP18.84■□□□□ 0.61
SDF4-204ENST00000459994 GLRX3O76003 335 aaKnown RBP18.83■□□□□ 0.6
SDF4-204ENST00000459994 PI4K2BQ8TCG2 481 aa18.83■□□□□ 0.6
SDF4-204ENST00000459994 TRIM47Q96LD4 638 aa18.83■□□□□ 0.6
SDF4-204ENST00000459994 PLXNB2O15031 1838 aa18.82■□□□□ 0.6
SDF4-204ENST00000459994 CHGBP05060 677 aa18.82■□□□□ 0.6
SDF4-204ENST00000459994 BCRP11274 1271 aa18.82■□□□□ 0.6
SDF4-204ENST00000459994 PLCG2P16885 1265 aa18.82■□□□□ 0.6
SDF4-204ENST00000459994 EVX2Q03828 476 aa18.82■□□□□ 0.6
SDF4-204ENST00000459994 ARMC5Q96C12 935 aa18.82■□□□□ 0.6
SDF4-204ENST00000459994 PI4KBQ9UBF8 816 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms