RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 MPHOSPH8Q99549 860 aa7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 MAP3K14Q99558 947 aa7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 ALG1Q9BT22 464 aa7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 KRT23Q9C075 422 aa7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 MTFR1LQ9H019 292 aa7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 PUS7LQ9H0K6 701 aaKnown RBP7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 FOXP1Q9H334 677 aaPredicted RBP7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 SPON1Q9HCB6 807 aa7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 CCDC87Q9NVE4 849 aa7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 IFNKQ9P0W0 207 aa7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 NAP1L2Q9ULW6 460 aaPredicted RBP7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 LAMB1P07942 1786 aa7.05□□□□□ -1.28
UBQLN4-202ENST00000459954 MROH5Q6ZUA9 1318 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 BTAF1O14981 1849 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 A0A0G2JLW4 131 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 CCDC196A0A1B0GTZ2 297 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 TCRBV5S4A2TA0A5A2 114 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 USP27XA6NNY8 438 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 KIF28PB7ZC32 967 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 ARHGAP6O43182 974 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 ZBTB43O43298 467 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 STX10O60499 249 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 PDE8AO60658 829 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 WDHD1O75717 1129 aaPredicted RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 PDE8BO95263 885 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 FMNL1O95466 1100 aaPredicted RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 POLR3DP05423 398 aaPredicted RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 CYP19A1P11511 503 aaPredicted RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 FGFR2P21802 821 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 ERCC5P28715 1186 aaPredicted RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 ADORA1P30542 326 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 RFC4P35249 363 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 IARSP41252 1262 aaKnown RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 MCAMP43121 646 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 PIP4K2AP48426 406 aaPredicted RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 NT5C2P49902 561 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 UBASH3AP57075 661 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 MDM2Q00987 491 aaPredicted RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 SSRP1Q08945 709 aaKnown RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 TBX2Q13207 712 aaPredicted RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 TUBB2AQ13885 445 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 ARID5BQ14865 1188 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 RILPL1Q5EBL4 403 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 KRBA2Q6ZNG9 492 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 PTF1AQ7RTS3 328 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 VPS37DQ86XT2 251 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 VSTM4Q8IW00 320 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 KRI1Q8N9T8 703 aaKnown RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 TTLL11Q8NHH1 800 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 STRBPQ96SI9 672 aaKnown RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 TUBB2BQ9BVA1 445 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 NBPF3Q9H094 633 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 HSD3B7Q9H2F3 369 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 ZBTB3Q9H5J0 574 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 ZNF215Q9UL58 517 aaPredicted RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 CEP131Q9UPN4 1083 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 IQSEC3Q9UPP2 1182 aaPredicted RBP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 RTL9Q8NET4 1388 aa7.04□□□□□ -1.28
UBQLN4-202ENST00000459954 PNPLA7Q6ZV29 1317 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 BAZ2AQ9UIF9 1905 aaKnown RBP7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 EFCAB8A8MWE9 144 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 SEMA3EO15041 775 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 ZBTB22O15209 634 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 ZPR1O75312 459 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 SMC2O95347 1197 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 BMP15O95972 392 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 PCP11498 1178 aaKnown RBP7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 PTPREP23469 700 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 POLD1P28340 1107 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 CRKLP46109 303 aaKnown RBP7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 SARSP49591 514 aaKnown RBP7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 CTSWP56202 376 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 HAND2P61296 217 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 SCARF1Q14162 830 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 SAFBQ15424 915 aaKnown RBP eCLIP7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 KMT5BQ4FZB7 885 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 METTL24Q5JXM2 366 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 SLC9C2Q5TAH2 1124 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 SHC4Q6S5L8 630 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 LDHAL6AQ6ZMR3 332 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 CYB5R4Q7L1T6 521 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 CHST3Q7LGC8 479 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 NLRP10Q86W26 655 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 SPATA20Q8TB22 786 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 ENOX1Q8TC92 643 aaKnown RBP7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 STAG1Q8WVM7 1258 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 LPIN2Q92539 896 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 ZNF592Q92610 1267 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 LY9Q9HBG7 655 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 ARGLU1Q9NWB6 273 aaPredicted RBP7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 DNAI1Q9UI46 699 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 KCNH3Q9ULD8 1083 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 ZNF652Q9Y2D9 606 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 LY75O60449 1722 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 DOT1LQ8TEK3 1739 aa7.03□□□□□ -1.28
UBQLN4-202ENST00000459954 MROH7-TTC4A0A0A0MT08 1334 aa7.02□□□□□ -1.28
UBQLN4-202ENST00000459954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 FAM177BA6PVY3 158 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms