RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MYH2Q9UKX2 1941 aa12.24□□□□□ -0.45
USP39-210ENST00000459775 TMEM88BA6NKF7 163 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 WDHD1O75717 1129 aaPredicted RBP12.23□□□□□ -0.45
USP39-210ENST00000459775 NEK4P51957 841 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 KCNB2Q92953 911 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 ZDHHC15Q96MV8 337 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 LRRC2Q9BYS8 371 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 MCM9Q9NXL9 1143 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 E7EWF7 191 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 DTNBO60941 627 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 PRDM1O75626 825 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
USP39-210ENST00000459775 PLCD1P51178 756 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 TNIP1Q15025 636 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 TBC1D10BQ4KMP7 808 aaPredicted RBP12.23□□□□□ -0.45
USP39-210ENST00000459775 MICALL2Q8IY33 904 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 DYNLL2Q96FJ2 89 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 THSD7BQ9C0I4 1608 aa12.23□□□□□ -0.45
USP39-210ENST00000459775 MAST2Q6P0Q8 1798 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 LOC102724159A0A0B4J2E5 919 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 ZNF213O14771 459 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 GNAT2P19087 354 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 MAP2K1Q02750 393 aaPredicted RBP12.22□□□□□ -0.45
USP39-210ENST00000459775 PWP2Q15269 919 aaKnown RBP12.22□□□□□ -0.45
USP39-210ENST00000459775 IMMTQ16891 758 aaKnown RBP12.22□□□□□ -0.45
USP39-210ENST00000459775 AXDND1Q5T1B0 1012 aaPredicted RBP12.22□□□□□ -0.45
USP39-210ENST00000459775 SLF2Q8IX21 1173 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 OGFOD1Q8N543 542 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 AGBL3Q8NEM8 1001 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 CNOT7Q9UIV1 285 aaKnown RBP12.22□□□□□ -0.45
USP39-210ENST00000459775 SERPINA10Q9UK55 444 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 FLT1P17948 1338 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 SPDYE2BA6NHP3 402 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 SPDYE6P0CI01 402 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 ZKSCAN1P17029 563 aaPredicted RBP12.22□□□□□ -0.45
USP39-210ENST00000459775 ANP32AP39687 249 aaKnown RBP12.22□□□□□ -0.45
USP39-210ENST00000459775 EPS15P42566 896 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 DLGAP5Q15398 846 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 ALX1Q15699 326 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 CDAN1Q8IWY9 1227 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 SLC44A5Q8NCS7 719 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 NACAP1Q9BZK3 213 aa12.22□□□□□ -0.45
USP39-210ENST00000459775 GPHNQ9NQX3 736 aaPredicted RBP12.22□□□□□ -0.45
USP39-210ENST00000459775 NEDD4P46934 1319 aa12.21□□□□□ -0.45
USP39-210ENST00000459775 TCP10L2B9ZVM9 353 aa12.21□□□□□ -0.45
USP39-210ENST00000459775 RRP9O43818 475 aaKnown RBP12.21□□□□□ -0.45
USP39-210ENST00000459775 PPARAQ07869 468 aa12.21□□□□□ -0.45
USP39-210ENST00000459775 RNF20Q5VTR2 975 aa12.21□□□□□ -0.45
USP39-210ENST00000459775 MYOZ2Q9NPC6 264 aa12.21□□□□□ -0.45
USP39-210ENST00000459775 FAM198AQ9UFP1 575 aa12.21□□□□□ -0.45
USP39-210ENST00000459775 CTNNA3Q9UI47 895 aa12.21□□□□□ -0.45
USP39-210ENST00000459775 MYO3BQ8WXR4 1341 aa12.21□□□□□ -0.46
USP39-210ENST00000459775 RASSF10A6NK89 507 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 B4E1Z4 1266 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 WNT10BO00744 389 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 EPB41L2O43491 1005 aaKnown RBP12.2□□□□□ -0.46
USP39-210ENST00000459775 RRP12Q5JTH9 1297 aaKnown RBP12.2□□□□□ -0.46
USP39-210ENST00000459775 SPRYD3Q8NCJ5 442 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 ABHD8Q96I13 439 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 ATP8A2Q9NTI2 1148 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 HDAC9Q9UKV0 1011 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 FAM196BA6NMK8 535 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 HDLBPQ00341 1268 aaKnown RBP12.2□□□□□ -0.46
USP39-210ENST00000459775 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
USP39-210ENST00000459775 TRPM4Q8TD43 1214 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 NEK1Q96PY6 1258 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 TBC1D2Q9BYX2 928 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 TOMM22Q9NS69 142 aa12.2□□□□□ -0.46
USP39-210ENST00000459775 RPAP1Q9BWH6 1393 aaPredicted RBP12.2□□□□□ -0.46
USP39-210ENST00000459775 BAZ2AQ9UIF9 1905 aaKnown RBP12.19□□□□□ -0.46
USP39-210ENST00000459775 POLR3DP05423 398 aaPredicted RBP12.19□□□□□ -0.46
USP39-210ENST00000459775 VEGFBP49765 207 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 ZNF280AP59817 542 aaPredicted RBP12.19□□□□□ -0.46
USP39-210ENST00000459775 RABEP1Q15276 862 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 TSGA10IPQ3SY00 556 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 DLK2Q6UY11 383 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 SH3BP5LQ7L8J4 393 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 GPC2Q8N158 579 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 MRIQ9BWK5 157 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 TAF1DQ9H5J8 278 aaPredicted RBP12.19□□□□□ -0.46
USP39-210ENST00000459775 ZSWIM6Q9HCJ5 1215 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 ZNF70Q9UC06 446 aaPredicted RBP12.19□□□□□ -0.46
USP39-210ENST00000459775 PRDM4Q9UKN5 801 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 DDTLA6NHG4 134 aaPredicted RBP12.19□□□□□ -0.46
USP39-210ENST00000459775 HSPA8P11142 646 aaKnown RBP12.19□□□□□ -0.46
USP39-210ENST00000459775 PLCG2P16885 1265 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 C12orf60Q5U649 245 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 RUFY3Q7L099 469 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 CYB5R4Q7L1T6 521 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 ZKSCAN3Q9BRR0 538 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 PSME4Q14997 1843 aa12.19□□□□□ -0.46
USP39-210ENST00000459775 LBX1P52954 281 aa12.18□□□□□ -0.46
USP39-210ENST00000459775 HIRAP54198 1017 aaPredicted RBP12.18□□□□□ -0.46
USP39-210ENST00000459775 ANTXR2P58335 489 aa12.18□□□□□ -0.46
USP39-210ENST00000459775 BLOC1S2Q6QNY1 142 aa12.18□□□□□ -0.46
USP39-210ENST00000459775 IL17RAQ96F46 866 aa12.18□□□□□ -0.46
USP39-210ENST00000459775 ZBED3Q96IU2 234 aaPredicted RBP12.18□□□□□ -0.46
USP39-210ENST00000459775 SENP2Q9HC62 589 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms