RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 URI1O94763 535 aaPredicted RBP9.75□□□□□ -0.85
VPS50-208ENST00000458707 MARCKSP29966 332 aaPredicted RBP9.75□□□□□ -0.85
VPS50-208ENST00000458707 HAND2P61296 217 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 PNOCQ13519 176 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 NBPF14Q5TI25 921 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 NBPF10Q6P3W6 841 aaKnown RBP9.75□□□□□ -0.85
VPS50-208ENST00000458707 OLFM4Q6UX06 510 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 RALYLQ86SE5 291 aaKnown RBP9.75□□□□□ -0.85
VPS50-208ENST00000458707 VPS37DQ86XT2 251 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 NBPF15Q8N660 670 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 CCDC191Q8NCU4 936 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 CARD6Q9BX69 1037 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 INTS13Q9NVM9 706 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 KCPQ6ZWJ8 1503 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 TMEM232C9JQI7 657 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 CYP27B1O15528 508 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 CDKL5O76039 1030 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 TBC1D8O95759 1140 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 MDM2Q00987 491 aaPredicted RBP9.74□□□□□ -0.85
VPS50-208ENST00000458707 TEX35Q5T0J7 233 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 NT5DC1Q5TFE4 455 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 KRT40Q6A162 431 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 CC2D1AQ6P1N0 951 aaPredicted RBP9.74□□□□□ -0.85
VPS50-208ENST00000458707 KRBA2Q6ZNG9 492 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 ANKLE2Q86XL3 938 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 FOXP4Q8IVH2 680 aaPredicted RBP9.74□□□□□ -0.85
VPS50-208ENST00000458707 ZNF594Q96JF6 807 aaPredicted RBP9.74□□□□□ -0.85
VPS50-208ENST00000458707 ALG1Q9BT22 464 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 FANCLQ9NW38 375 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 ANGEL1Q9UNK9 670 aaKnown RBP9.74□□□□□ -0.85
VPS50-208ENST00000458707 MRFAP1Q9Y605 127 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 COL22A1Q8NFW1 1626 aaPredicted RBP9.74□□□□□ -0.85
VPS50-208ENST00000458707 ERICH4A6NGS2 130 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 ZNF213O14771 459 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 ZNF18P17022 549 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 BMP6P22004 513 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 GORABQ5T7V8 394 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 CCDC102BQ68D86 513 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 ISM2Q6H9L7 571 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 KRT28Q7Z3Y7 464 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 KIFC2Q96AC6 838 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
VPS50-208ENST00000458707 BAG1Q99933 345 aaPredicted RBP9.74□□□□□ -0.85
VPS50-208ENST00000458707 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 PUS7LQ9H0K6 701 aaKnown RBP9.74□□□□□ -0.85
VPS50-208ENST00000458707 CEP126Q9P2H0 1117 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 AKAP2Q9Y2D5 859 aa9.74□□□□□ -0.85
VPS50-208ENST00000458707 SH2B2O14492 632 aaPredicted RBP9.73□□□□□ -0.85
VPS50-208ENST00000458707 SASH3O75995 380 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 CASQ1P31415 396 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 FKBP4Q02790 459 aaKnown RBP eCLIP9.73□□□□□ -0.85
VPS50-208ENST00000458707 NTRK3Q16288 839 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 WASHC4Q2M389 1173 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 LONRF3Q496Y0 759 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 TTC39AQ5SRH9 613 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 TC2NQ8N9U0 490 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 RABGGTAQ92696 567 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 XAGE2Q96GT9 111 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 PUS3Q9BZE2 481 aaKnown RBP9.73□□□□□ -0.85
VPS50-208ENST00000458707 NLRP2Q9NX02 1062 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 KCNH3Q9ULD8 1083 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 PCDHA5Q9Y5H7 936 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 STK36Q9NRP7 1315 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 NID2Q14112 1375 aa9.73□□□□□ -0.85
VPS50-208ENST00000458707 POTEB3A0JP26 581 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 GPAA1O43292 621 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 CDC27P30260 824 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 SARSP49591 514 aaKnown RBP9.72□□□□□ -0.85
VPS50-208ENST00000458707 METAP2P50579 478 aaKnown RBP eCLIP9.72□□□□□ -0.85
VPS50-208ENST00000458707 HNRNPH2P55795 449 aaKnown RBP9.72□□□□□ -0.85
VPS50-208ENST00000458707 PDE4BQ07343 736 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 MUM1L1Q5H9M0 696 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 JAKMIP3Q5VZ66 844 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 SPECC1LQ69YQ0 1117 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 POTEBQ6S5H4 581 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 TTLL7Q6ZT98 887 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 TXLNBQ8N3L3 684 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 ENOX1Q8TC92 643 aaKnown RBP9.72□□□□□ -0.85
VPS50-208ENST00000458707 AIFM3Q96NN9 605 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 WDR24Q96S15 920 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.72□□□□□ -0.85
VPS50-208ENST00000458707 C1orf167Q5SNV9 1468 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 SEC31AO94979 1220 aaKnown RBP9.72□□□□□ -0.85
VPS50-208ENST00000458707 ADORA1P30542 326 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 CABP4P57796 275 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 PPP2R3AQ06190 1150 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 GOLGA8FQ08AF8 430 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 GOLGA8DPQ0D2H9 430 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 SCARF1Q14162 830 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 LMOD2Q6P5Q4 547 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 CPLX2Q6PUV4 134 aaKnown RBP9.72□□□□□ -0.85
VPS50-208ENST00000458707 APOA5Q6Q788 366 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 SGMS1Q86VZ5 419 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 RAB11FIP4Q86YS3 637 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 TRIML1Q8N9V2 468 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 MLKLQ8NB16 471 aa9.72□□□□□ -0.85
VPS50-208ENST00000458707 CNNM3Q8NE01 707 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms