RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 BEND6Q5SZJ8 279 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-214ENST00000458640 RC3H1Q5TC82 1133 aaKnown RBP12.95□□□□□ -0.34
DDX39B-214ENST00000458640 CCDC50Q8IVM0 306 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 CNNM3Q8NE01 707 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 NAT10Q9H0A0 1025 aaKnown RBP12.95□□□□□ -0.34
DDX39B-214ENST00000458640 PDE11AQ9HCR9 933 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 PES1O00541 588 aaKnown RBP12.94□□□□□ -0.34
DDX39B-214ENST00000458640 SHOX2O60902 331 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-214ENST00000458640 CAMTA2O94983 1202 aa12.94□□□□□ -0.34
DDX39B-214ENST00000458640 PDCP20941 246 aa12.94□□□□□ -0.34
DDX39B-214ENST00000458640 IFIT5Q13325 482 aaKnown RBP12.94□□□□□ -0.34
DDX39B-214ENST00000458640 RBBP5Q15291 538 aaKnown RBP12.94□□□□□ -0.34
DDX39B-214ENST00000458640 TNNI3KQ59H18 835 aa12.94□□□□□ -0.34
DDX39B-214ENST00000458640 CLEC4GQ6UXB4 293 aa12.94□□□□□ -0.34
DDX39B-214ENST00000458640 LINC00116Q8NCU8 138 aa12.94□□□□□ -0.34
DDX39B-214ENST00000458640 TCP11Q8WWU5 503 aa12.94□□□□□ -0.34
DDX39B-214ENST00000458640 EAF2Q96CJ1 260 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-214ENST00000458640 JPH2Q9BR39 696 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-214ENST00000458640 DNAJC25Q9H1X3 360 aa12.94□□□□□ -0.34
DDX39B-214ENST00000458640 SH2B1Q9NRF2 756 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-214ENST00000458640 DACT1Q9NYF0 836 aa12.94□□□□□ -0.34
DDX39B-214ENST00000458640 CCNL1Q9UK58 526 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-214ENST00000458640 L1RE1Q9UN81 338 aa12.94□□□□□ -0.34
DDX39B-214ENST00000458640 FPGT-TNNI3KV9GXZ4 949 aa12.94□□□□□ -0.34
DDX39B-214ENST00000458640 SH3TC1Q8TE82 1336 aa12.94□□□□□ -0.34
DDX39B-214ENST00000458640 EYA2O00167 538 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 IRS4O14654 1257 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-214ENST00000458640 RTN2O75298 545 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 FSBPO95073 299 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 CTSWP56202 376 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 SLC8A3P57103 927 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 PPP2R3AQ06190 1150 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 ZNF772Q68DY9 489 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-214ENST00000458640 NAIF1Q69YI7 327 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-214ENST00000458640 WWC2Q6AWC2 1192 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 MSANTD4Q8NCY6 345 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 CCDC26Q8TAB7 109 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 N4BP2L2Q92802 583 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-214ENST00000458640 BORCS6Q96GS4 357 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 GPR108Q9NPR9 543 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 BATF3Q9NR55 127 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 HOMER3Q9NSC5 361 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 ODF2LQ9ULJ1 636 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 UBN2Q6ZU65 1347 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 PDE8AO60658 829 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 COQ9O75208 318 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 CSF1RP07333 972 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 HMGB2P26583 209 aaKnown RBP12.93□□□□□ -0.34
DDX39B-214ENST00000458640 HSPA4P34932 840 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 TFCP2Q12800 502 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 ARID5BQ14865 1188 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 PLCB4Q15147 1175 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 CWC27Q6UX04 472 aaKnown RBP12.93□□□□□ -0.34
DDX39B-214ENST00000458640 FAM196AQ6ZSG2 479 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 KIAA1328Q86T90 577 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 AFAP1L1Q8TED9 768 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 ANO10Q9NW15 660 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 FAN1Q9Y2M0 1017 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 MRFAP1Q9Y605 127 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 FAM169AQ9Y6X4 670 aa12.93□□□□□ -0.34
DDX39B-214ENST00000458640 BRWD3Q6RI45 1802 aa12.92□□□□□ -0.34
DDX39B-214ENST00000458640 CHMLP26374 656 aa12.92□□□□□ -0.34
DDX39B-214ENST00000458640 ARID4AP29374 1257 aaPredicted RBP12.92□□□□□ -0.34
DDX39B-214ENST00000458640 PRPHP41219 470 aa12.92□□□□□ -0.34
DDX39B-214ENST00000458640 AARSP49588 968 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDX39B-214ENST00000458640 TBC1D8BQ0IIM8 1120 aa12.92□□□□□ -0.34
DDX39B-214ENST00000458640 TTC6Q86TZ1 520 aa12.92□□□□□ -0.34
DDX39B-214ENST00000458640 ZNF483Q8TF39 744 aaPredicted RBP12.92□□□□□ -0.34
DDX39B-214ENST00000458640 EVI5LQ96CN4 794 aa12.92□□□□□ -0.34
DDX39B-214ENST00000458640 XAGE2Q96GT9 111 aa12.92□□□□□ -0.34
DDX39B-214ENST00000458640 CCDC8Q9H0W5 538 aaPredicted RBP12.92□□□□□ -0.34
DDX39B-214ENST00000458640 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 HIP1O00291 1037 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 GNL2Q13823 731 aaKnown RBP12.91□□□□□ -0.34
DDX39B-214ENST00000458640 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 GORABQ5T7V8 394 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 B4GALNT4Q76KP1 1039 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 CKAP2LQ8IYA6 745 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 TTC14Q96N46 770 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 NIP7Q9Y221 180 aaKnown RBP eCLIP12.91□□□□□ -0.345e-52■■□□□ 13.4
DDX39B-214ENST00000458640 ARHGAP25P42331 645 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 MTA1Q13330 715 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 CAMK4Q16566 473 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 ISM2Q6H9L7 571 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 RCSD1Q6JBY9 416 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 KRT27Q7Z3Y8 459 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 ZKSCAN4Q969J2 545 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-214ENST00000458640 BAG1Q99933 345 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-214ENST00000458640 BPIFA3Q9BQP9 254 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 ZNF609O15014 1411 aa12.91□□□□□ -0.34
DDX39B-214ENST00000458640 RPS6KA4O75676 772 aa12.9□□□□□ -0.34
DDX39B-214ENST00000458640 LIG3P49916 1009 aa12.9□□□□□ -0.34
DDX39B-214ENST00000458640 CPLX2Q6PUV4 134 aaKnown RBP12.9□□□□□ -0.34
DDX39B-214ENST00000458640 ATG9AQ7Z3C6 839 aa12.9□□□□□ -0.34
DDX39B-214ENST00000458640 YTHDF3Q7Z739 585 aaKnown RBP12.9□□□□□ -0.34
DDX39B-214ENST00000458640 IQCA1Q86XH1 822 aa12.9□□□□□ -0.34
DDX39B-214ENST00000458640 TTLL11Q8NHH1 800 aa12.9□□□□□ -0.34
DDX39B-214ENST00000458640 CEP126Q9P2H0 1117 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms