RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 MINDY4BA8MYZ0 360 aa20.06■□□□□ 0.8
TRIM39-211ENST00000458516 GABPAQ06546 454 aa20.06■□□□□ 0.8
TRIM39-211ENST00000458516 PPARAQ07869 468 aa20.06■□□□□ 0.8
TRIM39-211ENST00000458516 SUPT20HL1Q3ZLR7 823 aa20.06■□□□□ 0.8
TRIM39-211ENST00000458516 METTL16Q86W50 562 aaKnown RBP20.06■□□□□ 0.8
TRIM39-211ENST00000458516 NBPF3Q9H094 633 aa20.06■□□□□ 0.8
TRIM39-211ENST00000458516 CTNNA3Q9UI47 895 aa20.06■□□□□ 0.8
TRIM39-211ENST00000458516 ANAPC4Q9UJX5 808 aa20.06■□□□□ 0.8
TRIM39-211ENST00000458516 PASKQ96RG2 1323 aa20.05■□□□□ 0.8
TRIM39-211ENST00000458516 FAM196BA6NMK8 535 aa20.05■□□□□ 0.8
TRIM39-211ENST00000458516 EPB41L2O43491 1005 aaKnown RBP20.05■□□□□ 0.8
TRIM39-211ENST00000458516 HAND2P61296 217 aa20.05■□□□□ 0.8
TRIM39-211ENST00000458516 MAP3K10Q02779 954 aa20.05■□□□□ 0.8
TRIM39-211ENST00000458516 DYNLL2Q96FJ2 89 aa20.05■□□□□ 0.8
TRIM39-211ENST00000458516 SERPINB13Q9UIV8 391 aa20.05■□□□□ 0.8
TRIM39-211ENST00000458516 DOCK1Q14185 1865 aa20.05■□□□□ 0.8
TRIM39-211ENST00000458516 TBC1D12O60347 775 aa20.04■□□□□ 0.8
TRIM39-211ENST00000458516 CTDSPL2Q05D32 466 aa20.04■□□□□ 0.8
TRIM39-211ENST00000458516 NECTIN1Q15223 517 aa20.04■□□□□ 0.8
TRIM39-211ENST00000458516 C16orf86Q6ZW13 317 aa20.04■□□□□ 0.8
TRIM39-211ENST00000458516 MIGA2Q7L4E1 593 aa20.04■□□□□ 0.8
TRIM39-211ENST00000458516 FOXP4Q8IVH2 680 aaPredicted RBP20.04■□□□□ 0.8
TRIM39-211ENST00000458516 HOOK2Q96ED9 719 aa20.04■□□□□ 0.8
TRIM39-211ENST00000458516 USP26Q9BXU7 913 aa20.04■□□□□ 0.8
TRIM39-211ENST00000458516 TACC3Q9Y6A5 838 aa20.04■□□□□ 0.8
TRIM39-211ENST00000458516 EIF5BO60841 1220 aaKnown RBP20.03■□□□□ 0.8
TRIM39-211ENST00000458516 CYP21A2P08686 494 aa20.03■□□□□ 0.8
TRIM39-211ENST00000458516 NF2P35240 595 aa20.03■□□□□ 0.8
TRIM39-211ENST00000458516 FSTL1Q12841 308 aa20.03■□□□□ 0.8
TRIM39-211ENST00000458516 IMMTQ16891 758 aaKnown RBP20.03■□□□□ 0.8
TRIM39-211ENST00000458516 TBC1D10CQ8IV04 446 aa20.03■□□□□ 0.8
TRIM39-211ENST00000458516 CRACR2BQ8N4Y2 399 aaPredicted RBP20.03■□□□□ 0.8
TRIM39-211ENST00000458516 SLC44A5Q8NCS7 719 aa20.03■□□□□ 0.8
TRIM39-211ENST00000458516 HERC5Q9UII4 1024 aaKnown RBP20.03■□□□□ 0.8
TRIM39-211ENST00000458516 FZD1Q9UP38 647 aa20.03■□□□□ 0.8
TRIM39-211ENST00000458516 GREB1LQ9C091 1923 aaPredicted RBP20.03■□□□□ 0.8
TRIM39-211ENST00000458516 ZNF213O14771 459 aa20.02■□□□□ 0.8
TRIM39-211ENST00000458516 SLC27A2O14975 620 aa20.02■□□□□ 0.8
TRIM39-211ENST00000458516 SHMT1P34896 483 aa20.02■□□□□ 0.8
TRIM39-211ENST00000458516 DCAF15Q66K64 600 aa20.02■□□□□ 0.8
TRIM39-211ENST00000458516 CREB3L3Q68CJ9 461 aa20.02■□□□□ 0.8
TRIM39-211ENST00000458516 STK11IPQ8N1F8 1099 aa20.02■□□□□ 0.8
TRIM39-211ENST00000458516 BACH2Q9BYV9 841 aa20.02■□□□□ 0.8
TRIM39-211ENST00000458516 ZNF408Q9H9D4 720 aa20.02■□□□□ 0.8
TRIM39-211ENST00000458516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.02■□□□□ 0.8
TRIM39-211ENST00000458516 TAOK2Q9UL54 1235 aa20.02■□□□□ 0.8
TRIM39-211ENST00000458516 TAF6LQ9Y6J9 622 aa20.02■□□□□ 0.8
TRIM39-211ENST00000458516 CELF2O95319 508 aaKnown RBP20.01■□□□□ 0.79
TRIM39-211ENST00000458516 HSPA4P34932 840 aa20.01■□□□□ 0.79
TRIM39-211ENST00000458516 CDK8P49336 464 aa20.01■□□□□ 0.79
TRIM39-211ENST00000458516 STAG1Q8WVM7 1258 aa20.01■□□□□ 0.79
TRIM39-211ENST00000458516 TRIM34Q9BYJ4 488 aa20.01■□□□□ 0.79
TRIM39-211ENST00000458516 ZNF341Q9BYN7 854 aa20.01■□□□□ 0.79
TRIM39-211ENST00000458516 SWAP70Q9UH65 585 aa20.01■□□□□ 0.79
TRIM39-211ENST00000458516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.01■□□□□ 0.79
TRIM39-211ENST00000458516 USP2O75604 605 aaPredicted RBP20■□□□□ 0.79
TRIM39-211ENST00000458516 PRKG1Q13976 671 aa20■□□□□ 0.79
TRIM39-211ENST00000458516 CST9Q5W186 159 aa20■□□□□ 0.79
TRIM39-211ENST00000458516 TATDN1Q6P1N9 297 aa20■□□□□ 0.79
TRIM39-211ENST00000458516 KCNB2Q92953 911 aa20■□□□□ 0.79
TRIM39-211ENST00000458516 ZNF112Q9UJU3 913 aa20■□□□□ 0.79
TRIM39-211ENST00000458516 PHF20L1A8MW92 1017 aa19.99■□□□□ 0.79
TRIM39-211ENST00000458516 SLC3A2P08195 630 aaKnown RBP19.99■□□□□ 0.79
TRIM39-211ENST00000458516 FGRP09769 529 aa19.99■□□□□ 0.79
TRIM39-211ENST00000458516 RRP1BQ14684 758 aaKnown RBP19.99■□□□□ 0.79
TRIM39-211ENST00000458516 MAP3K11Q16584 847 aa19.99■□□□□ 0.79
TRIM39-211ENST00000458516 AKNAD1Q5T1N1 836 aa19.99■□□□□ 0.79
TRIM39-211ENST00000458516 MOB2Q70IA6 237 aa19.99■□□□□ 0.79
TRIM39-211ENST00000458516 KLRG1Q96E93 195 aa19.99■□□□□ 0.79
TRIM39-211ENST00000458516 INCENPQ9NQS7 918 aa19.99■□□□□ 0.79
TRIM39-211ENST00000458516 PHIPQ8WWQ0 1821 aa19.99■□□□□ 0.79
TRIM39-211ENST00000458516 NEDD4P46934 1319 aa19.99■□□□□ 0.79
TRIM39-211ENST00000458516 PPP1R12BO60237 982 aaPredicted RBP19.98■□□□□ 0.79
TRIM39-211ENST00000458516 PRDM1O75626 825 aa19.98■□□□□ 0.79
TRIM39-211ENST00000458516 PDE4BQ07343 736 aa19.98■□□□□ 0.79
TRIM39-211ENST00000458516 RNF20Q5VTR2 975 aa19.98■□□□□ 0.79
TRIM39-211ENST00000458516 STOX1Q6ZVD7 989 aa19.98■□□□□ 0.79
TRIM39-211ENST00000458516 RASEFQ8IZ41 740 aa19.98■□□□□ 0.79
TRIM39-211ENST00000458516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.98■□□□□ 0.79
TRIM39-211ENST00000458516 GBA2Q9HCG7 927 aaPredicted RBP19.98■□□□□ 0.79
TRIM39-211ENST00000458516 ANGEL1Q9UNK9 670 aaKnown RBP19.98■□□□□ 0.79
TRIM39-211ENST00000458516 ORC4O43929 436 aa19.97■□□□□ 0.79
TRIM39-211ENST00000458516 RASA1P20936 1047 aa19.97■□□□□ 0.79
TRIM39-211ENST00000458516 INPP5BP32019 993 aa19.97■□□□□ 0.79
TRIM39-211ENST00000458516 FKBP1BP68106 108 aa19.97■□□□□ 0.79
TRIM39-211ENST00000458516 ARMC9Q7Z3E5 817 aa19.97■□□□□ 0.79
TRIM39-211ENST00000458516 WRNIP1Q96S55 665 aa19.97■□□□□ 0.79
TRIM39-211ENST00000458516 RNF41Q9H4P4 317 aaPredicted RBP19.97■□□□□ 0.79
TRIM39-211ENST00000458516 E7EWF7 191 aa19.96■□□□□ 0.79
TRIM39-211ENST00000458516 PCP11498 1178 aaKnown RBP19.96■□□□□ 0.79
TRIM39-211ENST00000458516 MCCP23508 829 aa19.96■□□□□ 0.79
TRIM39-211ENST00000458516 IREB2P48200 963 aaKnown RBP19.96■□□□□ 0.79
TRIM39-211ENST00000458516 TTLL12Q14166 644 aaPredicted RBP19.96■□□□□ 0.79
TRIM39-211ENST00000458516 TSGA10IPQ3SY00 556 aa19.96■□□□□ 0.79
TRIM39-211ENST00000458516 MFSD6Q6ZSS7 791 aa19.96■□□□□ 0.79
TRIM39-211ENST00000458516 NKX2-3Q8TAU0 364 aa19.96■□□□□ 0.79
TRIM39-211ENST00000458516 MKNK2Q9HBH9 465 aa19.96■□□□□ 0.79
TRIM39-211ENST00000458516 ZNF287Q9HBT7 754 aa19.96■□□□□ 0.79
TRIM39-211ENST00000458516 GDF11O95390 407 aa19.95■□□□□ 0.78
TRIM39-211ENST00000458516 AKR1B1P15121 316 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms