RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 CCDC152Q4G0S7 254 aa23.78■■□□□ 1.4
CRAT-207ENST00000458362 PPP1R13BQ96KQ4 1090 aa23.78■■□□□ 1.4
CRAT-207ENST00000458362 A0A0G2JS52 829 aa23.77■■□□□ 1.4
CRAT-207ENST00000458362 SMIM22K7EJ46 135 aa23.77■■□□□ 1.4
CRAT-207ENST00000458362 NTSR2O95665 410 aa23.77■■□□□ 1.4
CRAT-207ENST00000458362 MDM2Q00987 491 aaPredicted RBP23.77■■□□□ 1.4
CRAT-207ENST00000458362 PDE4BQ07343 736 aa23.77■■□□□ 1.4
CRAT-207ENST00000458362 CRACR2BQ8N4Y2 399 aaPredicted RBP23.77■■□□□ 1.4
CRAT-207ENST00000458362 LRP2BPQ9P2M1 347 aa23.77■■□□□ 1.4
CRAT-207ENST00000458362 ZNF215Q9UL58 517 aaPredicted RBP23.77■■□□□ 1.4
CRAT-207ENST00000458362 MYH14Q7Z406 1995 aaKnown RBP23.77■■□□□ 1.4
CRAT-207ENST00000458362 IGHMBP2P38935 993 aaKnown RBP23.77■■□□□ 1.4
CRAT-207ENST00000458362 CHRNDQ07001 517 aa23.77■■□□□ 1.4
CRAT-207ENST00000458362 FBXO2Q9UK22 296 aaPredicted RBP23.77■■□□□ 1.4
CRAT-207ENST00000458362 BCL9LQ86UU0 1499 aa23.77■■□□□ 1.4
CRAT-207ENST00000458362 LAMB2P55268 1798 aa23.76■■□□□ 1.39
CRAT-207ENST00000458362 NR5A1Q13285 461 aa23.76■■□□□ 1.39
CRAT-207ENST00000458362 TRIM22Q8IYM9 498 aa23.76■■□□□ 1.39
CRAT-207ENST00000458362 ATP6V1AP38606 617 aa23.76■■□□□ 1.39
CRAT-207ENST00000458362 UBASH3AP57075 661 aa23.76■■□□□ 1.39
CRAT-207ENST00000458362 ITPK1Q13572 414 aa23.76■■□□□ 1.39
CRAT-207ENST00000458362 SART3Q15020 963 aaKnown RBP23.76■■□□□ 1.39
CRAT-207ENST00000458362 SAFBQ15424 915 aaKnown RBP eCLIP23.76■■□□□ 1.39
CRAT-207ENST00000458362 OXER1Q8TDS5 423 aa23.76■■□□□ 1.39
CRAT-207ENST00000458362 ACSBG1Q96GR2 724 aa23.76■■□□□ 1.39
CRAT-207ENST00000458362 CYP7A1P22680 504 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 PPARAQ07869 468 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 PTPN21Q16825 1174 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 ZNF654Q8IZM8 581 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 KIF18AQ8NI77 898 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 FANCLQ9NW38 375 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 NIP7Q9Y221 180 aaKnown RBP eCLIP23.75■■□□□ 1.39
CRAT-207ENST00000458362 PCDHB6Q9Y5E3 794 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 RTL9Q8NET4 1388 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 RREB1Q92766 1687 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 WTIPA6NIX2 430 aaPredicted RBP23.75■■□□□ 1.39
CRAT-207ENST00000458362 PARP10Q53GL7 1025 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 OLFM4Q6UX06 510 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 NUP133Q8WUM0 1156 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 SDR42E1Q8WUS8 393 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 FOXP1Q9H334 677 aaPredicted RBP23.75■■□□□ 1.39
CRAT-207ENST00000458362 MYH6P13533 1939 aa23.75■■□□□ 1.39
CRAT-207ENST00000458362 CICQ96RK0 1608 aaPredicted RBP23.74■■□□□ 1.39
CRAT-207ENST00000458362 PSDA5PKW4 1024 aaPredicted RBP23.74■■□□□ 1.39
CRAT-207ENST00000458362 TMEM232C9JQI7 657 aa23.74■■□□□ 1.39
CRAT-207ENST00000458362 SERPINC1P01008 464 aa23.74■■□□□ 1.39
CRAT-207ENST00000458362 PRR29P0C7W0 189 aa23.74■■□□□ 1.39
CRAT-207ENST00000458362 PTPREP23469 700 aa23.74■■□□□ 1.39
CRAT-207ENST00000458362 FANCBQ8NB91 859 aa23.74■■□□□ 1.39
CRAT-207ENST00000458362 SHISA4Q96DD7 197 aa23.74■■□□□ 1.39
CRAT-207ENST00000458362 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.74■■□□□ 1.39
CRAT-207ENST00000458362 V9GYY5 206 aaPredicted RBP23.74■■□□□ 1.39
CRAT-207ENST00000458362 ERICH2A1L162 156 aa23.73■■□□□ 1.39
CRAT-207ENST00000458362 DEXIO95424 95 aa23.73■■□□□ 1.39
CRAT-207ENST00000458362 KCNJ6P48051 423 aa23.73■■□□□ 1.39
CRAT-207ENST00000458362 MINDY4BA8MYZ0 360 aa23.73■■□□□ 1.39
CRAT-207ENST00000458362 MAN1B1Q9UKM7 699 aa23.73■■□□□ 1.39
CRAT-207ENST00000458362 GOLGA8FQ08AF8 430 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 GOLGA8DPQ0D2H9 430 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 SEC23AQ15436 765 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 INTS13Q9NVM9 706 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 SERTAD1Q9UHV2 236 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 TAF1P21675 1872 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 COL22A1Q8NFW1 1626 aaPredicted RBP23.72■■□□□ 1.39
CRAT-207ENST00000458362 COL1A1P02452 1464 aaPredicted RBP23.72■■□□□ 1.39
CRAT-207ENST00000458362 LOC102724428A0A0B4J2F2 783 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 KIF2AO00139 706 aaPredicted RBP23.72■■□□□ 1.39
CRAT-207ENST00000458362 CBFA2T2O43439 604 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 SIK1P57059 783 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 CFAP100Q494V2 611 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 RILPL1Q5EBL4 403 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 VSTM4Q8IW00 320 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 MTA3Q9BTC8 594 aa23.72■■□□□ 1.39
CRAT-207ENST00000458362 RNF41Q9H4P4 317 aaPredicted RBP23.72■■□□□ 1.39
CRAT-207ENST00000458362 CGNQ9P2M7 1197 aaKnown RBP23.72■■□□□ 1.39
CRAT-207ENST00000458362 MYH2Q9UKX2 1941 aa23.71■■□□□ 1.39
CRAT-207ENST00000458362 POLR2DO15514 142 aaKnown RBP23.71■■□□□ 1.39
CRAT-207ENST00000458362 GYG1P46976 350 aa23.71■■□□□ 1.39
CRAT-207ENST00000458362 ELOA2Q8IYF1 753 aaPredicted RBP23.71■■□□□ 1.39
CRAT-207ENST00000458362 GRAMD1CQ8IYS0 662 aa23.71■■□□□ 1.39
CRAT-207ENST00000458362 TMTC2Q8N394 836 aa23.71■■□□□ 1.39
CRAT-207ENST00000458362 UBAC1Q9BSL1 405 aa23.71■■□□□ 1.39
CRAT-207ENST00000458362 ABCF2Q9UG63 623 aa23.71■■□□□ 1.39
CRAT-207ENST00000458362 A0A1B0GUL6 1792 aa23.71■■□□□ 1.39
CRAT-207ENST00000458362 ATP2B1P20020 1258 aa23.71■■□□□ 1.39
CRAT-207ENST00000458362 DHX8Q14562 1220 aaKnown RBP23.71■■□□□ 1.39
CRAT-207ENST00000458362 POSTNQ15063 836 aa23.71■■□□□ 1.39
CRAT-207ENST00000458362 SYT10Q6XYQ8 523 aa23.71■■□□□ 1.39
CRAT-207ENST00000458362 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
CRAT-207ENST00000458362 TNKSO95271 1327 aa23.7■■□□□ 1.38
CRAT-207ENST00000458362 BAZ2AQ9UIF9 1905 aaKnown RBP23.7■■□□□ 1.38
CRAT-207ENST00000458362 MAGEB6P1A0A0J9YX57 407 aa23.7■■□□□ 1.38
CRAT-207ENST00000458362 CCDC196A0A1B0GTZ2 297 aa23.7■■□□□ 1.38
CRAT-207ENST00000458362 KDM4FA0A1W2PPD8 638 aa23.7■■□□□ 1.38
CRAT-207ENST00000458362 FAM205CA6NFA0 338 aa23.7■■□□□ 1.38
CRAT-207ENST00000458362 HSP90AA4PQ58FG1 418 aa23.7■■□□□ 1.38
CRAT-207ENST00000458362 USP49Q70CQ1 688 aa23.7■■□□□ 1.38
CRAT-207ENST00000458362 CDCA7Q9BWT1 371 aaPredicted RBP23.7■■□□□ 1.38
CRAT-207ENST00000458362 RAI14Q9P0K7 980 aa23.7■■□□□ 1.38
CRAT-207ENST00000458362 CACNA1SQ13698 1873 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms