RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 PPATQ06203 517 aa22.59■■□□□ 1.21
USP39-209ENST00000458268 HDAC1Q13547 482 aaPredicted RBP22.59■■□□□ 1.21
USP39-209ENST00000458268 LCORLQ8N3X6 602 aa22.59■■□□□ 1.21
USP39-209ENST00000458268 MS4A4AQ96JQ5 239 aa22.59■■□□□ 1.21
USP39-209ENST00000458268 PTPN18Q99952 460 aa22.59■■□□□ 1.21
USP39-209ENST00000458268 CRNKL1Q9BZJ0 848 aaKnown RBP22.59■■□□□ 1.21
USP39-209ENST00000458268 DHX36Q9H2U1 1008 aaKnown RBP22.59■■□□□ 1.21
USP39-209ENST00000458268 RWDD1Q9H446 243 aaPredicted RBP22.59■■□□□ 1.21
USP39-209ENST00000458268 ZHX2Q9Y6X8 837 aa22.59■■□□□ 1.21
USP39-209ENST00000458268 MBD4O95243 580 aa22.58■■□□□ 1.21
USP39-209ENST00000458268 CETPP11597 493 aa22.58■■□□□ 1.21
USP39-209ENST00000458268 ADD2P35612 726 aa22.58■■□□□ 1.21
USP39-209ENST00000458268 DGKZQ13574 1117 aa22.58■■□□□ 1.21
USP39-209ENST00000458268 TAF1CQ15572 869 aaPredicted RBP22.58■■□□□ 1.21
USP39-209ENST00000458268 NOL9Q5SY16 702 aaKnown RBP22.58■■□□□ 1.21
USP39-209ENST00000458268 CERS3Q8IU89 383 aa22.58■■□□□ 1.21
USP39-209ENST00000458268 GCC1Q96CN9 775 aa22.58■■□□□ 1.21
USP39-209ENST00000458268 RIOK1Q9BRS2 568 aaKnown RBP22.58■■□□□ 1.21
USP39-209ENST00000458268 PI4KBQ9UBF8 816 aa22.58■■□□□ 1.21
USP39-209ENST00000458268 TCRBV5S4A2TA0A5A2 114 aa22.57■■□□□ 1.2
USP39-209ENST00000458268 ERC2O15083 957 aa22.57■■□□□ 1.2
USP39-209ENST00000458268 MX1P20591 662 aa22.57■■□□□ 1.2
USP39-209ENST00000458268 SDR42E1Q8WUS8 393 aa22.57■■□□□ 1.2
USP39-209ENST00000458268 ZNF296Q8WUU4 475 aaPredicted RBP22.57■■□□□ 1.2
USP39-209ENST00000458268 GPR25O00155 361 aa22.56■■□□□ 1.2
USP39-209ENST00000458268 CTNND1O60716 968 aaKnown RBP22.56■■□□□ 1.2
USP39-209ENST00000458268 POLR3DP05423 398 aaPredicted RBP22.56■■□□□ 1.2
USP39-209ENST00000458268 CRHR2Q13324 411 aa22.56■■□□□ 1.2
USP39-209ENST00000458268 AAMPQ13685 434 aa22.56■■□□□ 1.2
USP39-209ENST00000458268 ZSCAN25Q6NSZ9 544 aa22.56■■□□□ 1.2
USP39-209ENST00000458268 FAM43AQ8N2R8 423 aa22.56■■□□□ 1.2
USP39-209ENST00000458268 LNPKQ9C0E8 428 aa22.56■■□□□ 1.2
USP39-209ENST00000458268 HERC5Q9UII4 1024 aaKnown RBP22.56■■□□□ 1.2
USP39-209ENST00000458268 BAZ2AQ9UIF9 1905 aaKnown RBP22.55■■□□□ 1.2
USP39-209ENST00000458268 TRIM75PA6NK02 468 aa22.55■■□□□ 1.2
USP39-209ENST00000458268 TBC1D12O60347 775 aa22.55■■□□□ 1.2
USP39-209ENST00000458268 GDF11O95390 407 aa22.55■■□□□ 1.2
USP39-209ENST00000458268 PTPRAP18433 802 aa22.55■■□□□ 1.2
USP39-209ENST00000458268 TMED8Q6PL24 325 aaPredicted RBP22.55■■□□□ 1.2
USP39-209ENST00000458268 GADL1Q6ZQY3 521 aa22.55■■□□□ 1.2
USP39-209ENST00000458268 TTC41PQ6P2S7 1318 aa22.55■■□□□ 1.2
USP39-209ENST00000458268 TESPA1A2RU30 521 aaPredicted RBP22.54■■□□□ 1.2
USP39-209ENST00000458268 BTBD19C9JJ37 291 aa22.54■■□□□ 1.2
USP39-209ENST00000458268 PRKAB2O43741 272 aa22.54■■□□□ 1.2
USP39-209ENST00000458268 ECM2O94769 699 aaPredicted RBP22.54■■□□□ 1.2
USP39-209ENST00000458268 IGHDP01880 384 aa22.54■■□□□ 1.2
USP39-209ENST00000458268 MCOLN1Q9GZU1 580 aa22.54■■□□□ 1.2
USP39-209ENST00000458268 MCM9Q9NXL9 1143 aa22.54■■□□□ 1.2
USP39-209ENST00000458268 PHIPQ8WWQ0 1821 aa22.54■■□□□ 1.2
USP39-209ENST00000458268 FKTNO75072 461 aa22.53■■□□□ 1.2
USP39-209ENST00000458268 GLRX3O76003 335 aaKnown RBP22.53■■□□□ 1.2
USP39-209ENST00000458268 MAP3K10Q02779 954 aa22.53■■□□□ 1.2
USP39-209ENST00000458268 RRP1BQ14684 758 aaKnown RBP22.53■■□□□ 1.2
USP39-209ENST00000458268 IFFO2Q5TF58 517 aa22.53■■□□□ 1.2
USP39-209ENST00000458268 KBTBD3Q8NAB2 608 aa22.53■■□□□ 1.2
USP39-209ENST00000458268 FSD1Q9BTV5 496 aa22.53■■□□□ 1.2
USP39-209ENST00000458268 DDX60LQ5H9U9 1706 aaKnown RBP22.52■■□□□ 1.2
USP39-209ENST00000458268 CAP2P40123 477 aa22.52■■□□□ 1.2
USP39-209ENST00000458268 SHROOM1Q2M3G4 852 aaPredicted RBP22.52■■□□□ 1.2
USP39-209ENST00000458268 TTC6Q86TZ1 520 aa22.52■■□□□ 1.2
USP39-209ENST00000458268 FOXP4Q8IVH2 680 aaPredicted RBP22.52■■□□□ 1.2
USP39-209ENST00000458268 PI4K2BQ8TCG2 481 aa22.52■■□□□ 1.2
USP39-209ENST00000458268 DNAJC18Q9H819 358 aa22.52■■□□□ 1.2
USP39-209ENST00000458268 ZFYVE28Q9HCC9 887 aa22.52■■□□□ 1.2
USP39-209ENST00000458268 PTPRFP10586 1907 aa22.52■■□□□ 1.2
USP39-209ENST00000458268 UBE3CQ15386 1083 aa22.51■■□□□ 1.19
USP39-209ENST00000458268 PUS7LQ9H0K6 701 aaKnown RBP22.51■■□□□ 1.19
USP39-209ENST00000458268 KCNH4Q9UQ05 1017 aa22.51■■□□□ 1.19
USP39-209ENST00000458268 SLC4A4Q9Y6R1 1079 aa22.51■■□□□ 1.19
USP39-209ENST00000458268 MYH8P13535 1937 aa22.51■■□□□ 1.19
USP39-209ENST00000458268 CYP2D6P10635 497 aa22.5■■□□□ 1.19
USP39-209ENST00000458268 EVX2Q03828 476 aa22.5■■□□□ 1.19
USP39-209ENST00000458268 CTU1Q7Z7A3 348 aaKnown RBP22.5■■□□□ 1.19
USP39-209ENST00000458268 SERPINB13Q9UIV8 391 aa22.5■■□□□ 1.19
USP39-209ENST00000458268 PDHXO00330 501 aa22.49■■□□□ 1.19
USP39-209ENST00000458268 CXCL11O14625 94 aa22.49■■□□□ 1.19
USP39-209ENST00000458268 RNF113AO15541 343 aaKnown RBP22.49■■□□□ 1.19
USP39-209ENST00000458268 PLCD1P51178 756 aa22.49■■□□□ 1.19
USP39-209ENST00000458268 SPP2Q13103 211 aa22.49■■□□□ 1.19
USP39-209ENST00000458268 CD99L2Q8TCZ2 262 aa22.49■■□□□ 1.19
USP39-209ENST00000458268 DDRGK1Q96HY6 314 aa22.49■■□□□ 1.19
USP39-209ENST00000458268 ABHD8Q96I13 439 aa22.49■■□□□ 1.19
USP39-209ENST00000458268 DCP1AQ9NPI6 582 aaPredicted RBP22.49■■□□□ 1.19
USP39-209ENST00000458268 AFG3L2Q9Y4W6 797 aa22.49■■□□□ 1.19
USP39-209ENST00000458268 USP17L5A8MUK1 530 aa22.48■■□□□ 1.19
USP39-209ENST00000458268 CFHR5Q9BXR6 569 aa22.48■■□□□ 1.19
USP39-209ENST00000458268 CYP2D7A0A087X1C5 515 aa22.47■■□□□ 1.19
USP39-209ENST00000458268 PDE1AP54750 535 aa22.47■■□□□ 1.19
USP39-209ENST00000458268 JAG1P78504 1218 aa22.47■■□□□ 1.19
USP39-209ENST00000458268 LRRFIP1Q32MZ4 808 aaKnown RBP22.47■■□□□ 1.19
USP39-209ENST00000458268 ANKRD23Q86SG2 305 aa22.47■■□□□ 1.19
USP39-209ENST00000458268 SMC5Q8IY18 1101 aa22.47■■□□□ 1.19
USP39-209ENST00000458268 AMOTL1Q8IY63 956 aa22.47■■□□□ 1.19
USP39-209ENST00000458268 APPBP2Q92624 585 aa22.47■■□□□ 1.19
USP39-209ENST00000458268 AS3MTQ9HBK9 375 aa22.47■■□□□ 1.19
USP39-209ENST00000458268 ZBTB21Q9ULJ3 1066 aa22.47■■□□□ 1.19
USP39-209ENST00000458268 A0A0G2JLL6 359 aaPredicted RBP22.46■■□□□ 1.19
USP39-209ENST00000458268 CCDC85CA6NKD9 419 aa22.46■■□□□ 1.19
USP39-209ENST00000458268 MPHOSPH10O00566 681 aaKnown RBP22.46■■□□□ 1.19
USP39-209ENST00000458268 GH2P01242 217 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms