RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ABT1Q9ULW3 272 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-204ENST00000458188 RBM8AQ9Y5S9 174 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-204ENST00000458188 TACC3Q9Y6A5 838 aa10.36□□□□□ -0.75
CLTCL1-204ENST00000458188 MYH13Q9UKX3 1938 aa10.36□□□□□ -0.75
CLTCL1-204ENST00000458188 RAD50Q92878 1312 aa10.35□□□□□ -0.75
CLTCL1-204ENST00000458188 PITPNM2Q9BZ72 1349 aa10.35□□□□□ -0.75
CLTCL1-204ENST00000458188 PSME4Q14997 1843 aa10.35□□□□□ -0.75
CLTCL1-204ENST00000458188 PRDM1O75626 825 aa10.35□□□□□ -0.75
CLTCL1-204ENST00000458188 C12orf60Q5U649 245 aa10.35□□□□□ -0.75
CLTCL1-204ENST00000458188 FKBP1CQ5VVH2 108 aa10.35□□□□□ -0.75
CLTCL1-204ENST00000458188 MAP4K1Q92918 833 aa10.35□□□□□ -0.75
CLTCL1-204ENST00000458188 DSCC1Q9BVC3 393 aa10.35□□□□□ -0.75
CLTCL1-204ENST00000458188 TAF6LQ9Y6J9 622 aa10.35□□□□□ -0.75
CLTCL1-204ENST00000458188 SCN4AP35499 1836 aa10.35□□□□□ -0.75
CLTCL1-204ENST00000458188 ZNF213O14771 459 aa10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 NPM3O75607 178 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 CELF2O95319 508 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 HLA-DOAP06340 250 aa10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 ECE1P42892 770 aa10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 PPARAQ07869 468 aa10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 TTLL12Q14166 644 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 RRP1BQ14684 758 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 SHROOM1Q2M3G4 852 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 TTC6Q86TZ1 520 aa10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 CRACR2BQ8N4Y2 399 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 NKX2-3Q8TAU0 364 aa10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 PI4KBQ9UBF8 816 aa10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 DOCK2Q92608 1830 aa10.34□□□□□ -0.75
CLTCL1-204ENST00000458188 MYH2Q9UKX2 1941 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 UBE2Q2LH0YL09 131 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 USP2O75604 605 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 ALX1Q15699 326 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 SUPT20HL1Q3ZLR7 823 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 SBK1Q52WX2 424 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 RRP12Q5JTH9 1297 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 CST9Q5W186 159 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 GIMAP6Q6P9H5 292 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 TBC1D10CQ8IV04 446 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 AMOTL1Q8IY63 956 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 USP26Q9BXU7 913 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 TRIM34Q9BYJ4 488 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 NBPF3Q9H094 633 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 DHX36Q9H2U1 1008 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 DNAJC18Q9H819 358 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 TOMM22Q9NS69 142 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 ARPP21Q9UBL0 812 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 ANGEL1Q9UNK9 670 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 PPP2R3BQ9Y5P8 575 aa10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 U3KPZ7 1027 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-204ENST00000458188 MAST2Q6P0Q8 1798 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 RPAP1Q9BWH6 1393 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 SLC27A2O14975 620 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 REC8O95072 547 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 GDF11O95390 407 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 CYP21A2P08686 494 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 CDK8P49336 464 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 JAG1P78504 1218 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 GRM1Q13255 1194 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 COL9A3Q14050 684 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 NECTIN1Q15223 517 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 IMMTQ16891 758 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 FAM47AQ5JRC9 791 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 CREB3L3Q68CJ9 461 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 CCDC84Q86UT8 332 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 FOXP4Q8IVH2 680 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 RASEFQ8IZ41 740 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 ZKSCAN4Q969J2 545 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 MCOLN1Q9GZU1 580 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 CTNNA3Q9UI47 895 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 SERPINB13Q9UIV8 391 aa10.32□□□□□ -0.76
CLTCL1-204ENST00000458188 MPHOSPH10O00566 681 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-204ENST00000458188 INPP5BP32019 993 aa10.31□□□□□ -0.76
CLTCL1-204ENST00000458188 SHMT1P34896 483 aa10.31□□□□□ -0.76
CLTCL1-204ENST00000458188 NF2P35240 595 aa10.31□□□□□ -0.76
CLTCL1-204ENST00000458188 GABPAQ06546 454 aa10.31□□□□□ -0.76
CLTCL1-204ENST00000458188 STOX1Q6ZVD7 989 aa10.31□□□□□ -0.76
CLTCL1-204ENST00000458188 BACH2Q9BYV9 841 aa10.31□□□□□ -0.76
CLTCL1-204ENST00000458188 MKNK2Q9HBH9 465 aa10.31□□□□□ -0.76
CLTCL1-204ENST00000458188 SSC5DA1L4H1 1573 aa10.31□□□□□ -0.76
CLTCL1-204ENST00000458188 ATRNL1Q5VV63 1379 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 PHF20L1A8MW92 1017 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 E7EWF7 191 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 CA12O43570 354 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 CPA1P15085 419 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 AKR1B1P15121 316 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 HSPA4P34932 840 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 ADCK5Q3MIX3 580 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 CERKLQ49MI3 558 aaPredicted RBP10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 AKNAD1Q5T1N1 836 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 DCAF15Q66K64 600 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 MFSD6Q6ZSS7 791 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 C16orf86Q6ZW13 317 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 CHST3Q7LGC8 479 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 ZNF444Q8N0Y2 327 aaPredicted RBP10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 CLMNQ96JQ2 1002 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 CAPNS2Q96L46 248 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 WRNIP1Q96S55 665 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms