RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 PPP1R12BO60237 982 aaPredicted RBP12.12□□□□□ -0.47
ATG4A-206ENST00000457035 MAP3K10Q02779 954 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 PRKG1Q13976 671 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 LRRFIP1Q32MZ4 808 aaKnown RBP12.12□□□□□ -0.47
ATG4A-206ENST00000457035 ZMYM1Q5SVZ6 1142 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 LDLRAD1Q5T700 205 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 TTC22Q5TAA0 569 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 SKAP1Q86WV1 359 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 MAPKAPK5Q8IW41 473 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 LCORLQ8N3X6 602 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 APPBP2Q92624 585 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 HHIPL1Q96JK4 782 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 BEGAINQ9BUH8 593 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 OSBPL5Q9H0X9 879 aaPredicted RBP12.12□□□□□ -0.47
ATG4A-206ENST00000457035 ARMT1Q9H993 441 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 PAPPA2Q9BXP8 1791 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 ATRNL1Q5VV63 1379 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 PRKAB2O43741 272 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 AOC2O75106 756 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 MBD4O95243 580 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 CHRM1P11229 460 aaPredicted RBP12.11□□□□□ -0.47
ATG4A-206ENST00000457035 GSPT1P15170 499 aaKnown RBP12.11□□□□□ -0.47
ATG4A-206ENST00000457035 TIE1P35590 1138 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 HUNKP57058 714 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 MIGA2Q7L4E1 593 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 ARMC9Q7Z3E5 817 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 RILPL2Q969X0 211 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
ATG4A-206ENST00000457035 SEC62Q99442 399 aaKnown RBP12.11□□□□□ -0.47
ATG4A-206ENST00000457035 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 ANGEL1Q9UNK9 670 aaKnown RBP12.11□□□□□ -0.47
ATG4A-206ENST00000457035 FLT1P17948 1338 aa12.11□□□□□ -0.47
ATG4A-206ENST00000457035 SIPA1L1O43166 1804 aa12.1□□□□□ -0.47
ATG4A-206ENST00000457035 M0R2C6 588 aa12.1□□□□□ -0.47
ATG4A-206ENST00000457035 SLURP2P0DP57 97 aa12.1□□□□□ -0.47
ATG4A-206ENST00000457035 SDSP20132 328 aa12.1□□□□□ -0.47
ATG4A-206ENST00000457035 TTLL12Q14166 644 aaPredicted RBP12.1□□□□□ -0.47
ATG4A-206ENST00000457035 ZSCAN29Q8IWY8 852 aaPredicted RBP12.1□□□□□ -0.47
ATG4A-206ENST00000457035 HOOK2Q96ED9 719 aa12.1□□□□□ -0.47
ATG4A-206ENST00000457035 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
ATG4A-206ENST00000457035 CRNKL1Q9BZJ0 848 aaKnown RBP12.1□□□□□ -0.47
ATG4A-206ENST00000457035 ZNF112Q9UJU3 913 aa12.1□□□□□ -0.47
ATG4A-206ENST00000457035 PALD1Q9ULE6 856 aa12.1□□□□□ -0.47
ATG4A-206ENST00000457035 COL2A1P02458 1487 aaPredicted RBP12.09□□□□□ -0.47
ATG4A-206ENST00000457035 UNCXA6NJT0 531 aa12.09□□□□□ -0.47
ATG4A-206ENST00000457035 TBC1D12O60347 775 aa12.09□□□□□ -0.47
ATG4A-206ENST00000457035 USP5P45974 858 aa12.09□□□□□ -0.47
ATG4A-206ENST00000457035 MAP3K9P80192 1104 aa12.09□□□□□ -0.47
ATG4A-206ENST00000457035 DCAF15Q66K64 600 aa12.09□□□□□ -0.47
ATG4A-206ENST00000457035 RGMBQ6NW40 437 aa12.09□□□□□ -0.47
ATG4A-206ENST00000457035 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.09□□□□□ -0.47
ATG4A-206ENST00000457035 METTL16Q86W50 562 aaKnown RBP12.09□□□□□ -0.47
ATG4A-206ENST00000457035 SDR42E1Q8WUS8 393 aa12.09□□□□□ -0.47
ATG4A-206ENST00000457035 DHX36Q9H2U1 1008 aaKnown RBP12.09□□□□□ -0.47
ATG4A-206ENST00000457035 DCP1AQ9NPI6 582 aaPredicted RBP12.09□□□□□ -0.47
ATG4A-206ENST00000457035 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
ATG4A-206ENST00000457035 PI4KBQ9UBF8 816 aa12.09□□□□□ -0.47
ATG4A-206ENST00000457035 OTOFQ9HC10 1997 aa12.09□□□□□ -0.47
ATG4A-206ENST00000457035 GSG1L2A8MUP6 293 aa12.08□□□□□ -0.48
ATG4A-206ENST00000457035 PHF20L1A8MW92 1017 aa12.08□□□□□ -0.48
ATG4A-206ENST00000457035 GPAA1O43292 621 aa12.08□□□□□ -0.48
ATG4A-206ENST00000457035 IREB2P48200 963 aaKnown RBP12.08□□□□□ -0.48
ATG4A-206ENST00000457035 FOXP4Q8IVH2 680 aaPredicted RBP12.08□□□□□ -0.48
ATG4A-206ENST00000457035 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.08□□□□□ -0.48
ATG4A-206ENST00000457035 ABHD8Q96I13 439 aa12.08□□□□□ -0.48
ATG4A-206ENST00000457035 FAM227BQ96M60 508 aa12.08□□□□□ -0.48
ATG4A-206ENST00000457035 ZNF341Q9BYN7 854 aa12.08□□□□□ -0.48
ATG4A-206ENST00000457035 HELLSQ9NRZ9 838 aa12.08□□□□□ -0.48
ATG4A-206ENST00000457035 ATP8A2Q9NTI2 1148 aa12.08□□□□□ -0.48
ATG4A-206ENST00000457035 SAP30BPQ9UHR5 308 aaKnown RBP12.08□□□□□ -0.48
ATG4A-206ENST00000457035 SLC4A4Q9Y6R1 1079 aa12.08□□□□□ -0.48
ATG4A-206ENST00000457035 A0A0D9SFI3 127 aa12.07□□□□□ -0.48
ATG4A-206ENST00000457035 FAM155AB1AL88 458 aaPredicted RBP12.07□□□□□ -0.48
ATG4A-206ENST00000457035 PATL2C9JE40 543 aaKnown RBP12.07□□□□□ -0.48
ATG4A-206ENST00000457035 PLCD1P51178 756 aa12.07□□□□□ -0.48
ATG4A-206ENST00000457035 ZNF157P51786 506 aaPredicted RBP12.07□□□□□ -0.48
ATG4A-206ENST00000457035 ATN1P54259 1190 aaPredicted RBP12.07□□□□□ -0.48
ATG4A-206ENST00000457035 NMIQ13287 307 aaPredicted RBP12.07□□□□□ -0.48
ATG4A-206ENST00000457035 MCMDC2Q4G0Z9 681 aa12.07□□□□□ -0.48
ATG4A-206ENST00000457035 LHX8Q68G74 356 aa12.07□□□□□ -0.48
ATG4A-206ENST00000457035 ANKRD13AQ8IZ07 590 aa12.07□□□□□ -0.48
ATG4A-206ENST00000457035 NAV1Q8NEY1 1877 aa12.07□□□□□ -0.48
ATG4A-206ENST00000457035 CLMNQ96JQ2 1002 aa12.07□□□□□ -0.48
ATG4A-206ENST00000457035 MCM9Q9NXL9 1143 aa12.07□□□□□ -0.48
ATG4A-206ENST00000457035 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
ATG4A-206ENST00000457035 DDX60LQ5H9U9 1706 aaKnown RBP12.06□□□□□ -0.48
ATG4A-206ENST00000457035 GNAT2P19087 354 aa12.06□□□□□ -0.48
ATG4A-206ENST00000457035 INPP5BP32019 993 aa12.06□□□□□ -0.48
ATG4A-206ENST00000457035 GIMAP6Q6P9H5 292 aa12.06□□□□□ -0.48
ATG4A-206ENST00000457035 CCDC129Q6ZRS4 1044 aa12.06□□□□□ -0.48
ATG4A-206ENST00000457035 TTC6Q86TZ1 520 aa12.06□□□□□ -0.48
ATG4A-206ENST00000457035 ZKSCAN4Q969J2 545 aaPredicted RBP12.06□□□□□ -0.48
ATG4A-206ENST00000457035 CCDC102AQ96A19 550 aa12.06□□□□□ -0.48
ATG4A-206ENST00000457035 SLC10A4Q96EP9 437 aa12.06□□□□□ -0.48
ATG4A-206ENST00000457035 WRNIP1Q96S55 665 aa12.06□□□□□ -0.48
ATG4A-206ENST00000457035 DNAJC18Q9H819 358 aa12.06□□□□□ -0.48
ATG4A-206ENST00000457035 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.06□□□□□ -0.48
ATG4A-206ENST00000457035 HERC5Q9UII4 1024 aaKnown RBP12.06□□□□□ -0.48
ATG4A-206ENST00000457035 FAM196BA6NMK8 535 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms