RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 NOM1Q5C9Z4 860 aaKnown RBP27.99■■■□□ 2.07
CBX3-204ENST00000456948 EDC3Q96F86 508 aaKnown RBP27.99■■■□□ 2.07
CBX3-204ENST00000456948 MCOLN1Q9GZU1 580 aa27.99■■■□□ 2.07
CBX3-204ENST00000456948 GLRX3O76003 335 aaKnown RBP27.98■■■□□ 2.07
CBX3-204ENST00000456948 ADD2P35612 726 aa27.98■■■□□ 2.07
CBX3-204ENST00000456948 UBE3CQ15386 1083 aa27.98■■■□□ 2.07
CBX3-204ENST00000456948 TTC6Q86TZ1 520 aa27.98■■■□□ 2.07
CBX3-204ENST00000456948 DDRGK1Q96HY6 314 aa27.97■■■□□ 2.07
CBX3-204ENST00000456948 PALD1Q9ULE6 856 aa27.97■■■□□ 2.07
CBX3-204ENST00000456948 IGF2BP3O00425 579 aaKnown RBP eCLIP27.96■■■□□ 2.07
CBX3-204ENST00000456948 CXCL11O14625 94 aa27.96■■■□□ 2.07
CBX3-204ENST00000456948 MX1P20591 662 aa27.96■■■□□ 2.07
CBX3-204ENST00000456948 RIOK1Q9BRS2 568 aaKnown RBP27.96■■■□□ 2.07
CBX3-204ENST00000456948 TBC1D2Q9BYX2 928 aa27.96■■■□□ 2.07
CBX3-204ENST00000456948 ZCCHC17Q9NP64 241 aaKnown RBP27.96■■■□□ 2.07
CBX3-204ENST00000456948 SAP30BPQ9UHR5 308 aaKnown RBP27.96■■■□□ 2.07
CBX3-204ENST00000456948 ZHX2Q9Y6X8 837 aa27.96■■■□□ 2.07
CBX3-204ENST00000456948 TCRBV5S4A2TA0A5A2 114 aa27.95■■■□□ 2.06
CBX3-204ENST00000456948 CCDC85CA6NKD9 419 aa27.95■■■□□ 2.06
CBX3-204ENST00000456948 BRI3BPQ8WY22 251 aa27.95■■■□□ 2.06
CBX3-204ENST00000456948 GPR25O00155 361 aa27.94■■■□□ 2.06
CBX3-204ENST00000456948 POLR3DP05423 398 aaPredicted RBP27.94■■■□□ 2.06
CBX3-204ENST00000456948 ZFYP08048 801 aaPredicted RBP27.94■■■□□ 2.06
CBX3-204ENST00000456948 PTPRAP18433 802 aa27.94■■■□□ 2.06
CBX3-204ENST00000456948 KBTBD3Q8NAB2 608 aa27.94■■■□□ 2.06
CBX3-204ENST00000456948 ZFYVE28Q9HCC9 887 aa27.94■■■□□ 2.06
CBX3-204ENST00000456948 GINM1Q9NU53 330 aa27.94■■■□□ 2.06
CBX3-204ENST00000456948 KCNH4Q9UQ05 1017 aa27.94■■■□□ 2.06
CBX3-204ENST00000456948 FASTKD5Q7L8L6 764 aaKnown RBP27.93■■■□□ 2.06
CBX3-204ENST00000456948 AMOTL1Q8IY63 956 aa27.93■■■□□ 2.06
CBX3-204ENST00000456948 PTPN18Q99952 460 aa27.93■■■□□ 2.06
CBX3-204ENST00000456948 LAMB1P07942 1786 aa27.93■■■□□ 2.06
CBX3-204ENST00000456948 FOCADQ5VW36 1801 aa27.92■■■□□ 2.06
CBX3-204ENST00000456948 FKTNO75072 461 aa27.92■■■□□ 2.06
CBX3-204ENST00000456948 CAP2P40123 477 aa27.92■■■□□ 2.06
CBX3-204ENST00000456948 TSHZ3Q63HK5 1081 aa27.92■■■□□ 2.06
CBX3-204ENST00000456948 METTL16Q86W50 562 aaKnown RBP27.92■■■□□ 2.06
CBX3-204ENST00000456948 FAM196BA6NMK8 535 aa27.91■■■□□ 2.06
CBX3-204ENST00000456948 ASNSP08243 561 aa27.91■■■□□ 2.06
CBX3-204ENST00000456948 TAF1CQ15572 869 aaPredicted RBP27.91■■■□□ 2.06
CBX3-204ENST00000456948 SMC5Q8IY18 1101 aa27.91■■■□□ 2.06
CBX3-204ENST00000456948 EHD4Q9H223 541 aa27.91■■■□□ 2.06
CBX3-204ENST00000456948 AS3MTQ9HBK9 375 aa27.91■■■□□ 2.06
CBX3-204ENST00000456948 ATP8A2Q9NTI2 1148 aa27.91■■■□□ 2.06
CBX3-204ENST00000456948 SERPINB13Q9UIV8 391 aa27.91■■■□□ 2.06
CBX3-204ENST00000456948 CDK5RAP2Q96SN8 1893 aa27.91■■■□□ 2.06
CBX3-204ENST00000456948 MBD4O95243 580 aa27.9■■■□□ 2.06
CBX3-204ENST00000456948 ZNF296Q8WUU4 475 aaPredicted RBP27.9■■■□□ 2.06
CBX3-204ENST00000456948 ARMT1Q9H993 441 aa27.9■■■□□ 2.06
CBX3-204ENST00000456948 MCM9Q9NXL9 1143 aa27.9■■■□□ 2.06
CBX3-204ENST00000456948 MYH1P12882 1939 aa27.89■■■□□ 2.06
CBX3-204ENST00000456948 CRHR2Q13324 411 aa27.89■■■□□ 2.06
CBX3-204ENST00000456948 LCORLQ8N3X6 602 aa27.89■■■□□ 2.06
CBX3-204ENST00000456948 TAOK2Q9UL54 1235 aa27.89■■■□□ 2.06
CBX3-204ENST00000456948 AFG3L2Q9Y4W6 797 aa27.89■■■□□ 2.06
CBX3-204ENST00000456948 MYH7P12883 1935 aa27.88■■■□□ 2.05
CBX3-204ENST00000456948 USP17L5A8MUK1 530 aa27.88■■■□□ 2.05
CBX3-204ENST00000456948 RNF113AO15541 343 aaKnown RBP27.88■■■□□ 2.05
CBX3-204ENST00000456948 ARHGEF6Q15052 776 aa27.88■■■□□ 2.05
CBX3-204ENST00000456948 B4GALNT3Q6L9W6 998 aa27.88■■■□□ 2.05
CBX3-204ENST00000456948 ANKRD23Q86SG2 305 aa27.88■■■□□ 2.05
CBX3-204ENST00000456948 FAM43AQ8N2R8 423 aa27.88■■■□□ 2.05
CBX3-204ENST00000456948 PI4K2BQ8TCG2 481 aa27.88■■■□□ 2.05
CBX3-204ENST00000456948 BTBD19C9JJ37 291 aa27.87■■■□□ 2.05
CBX3-204ENST00000456948 SLURP2P0DP57 97 aa27.87■■■□□ 2.05
CBX3-204ENST00000456948 SLC4A8Q2Y0W8 1093 aa27.87■■■□□ 2.05
CBX3-204ENST00000456948 CTU1Q7Z7A3 348 aaKnown RBP27.87■■■□□ 2.05
CBX3-204ENST00000456948 OTUD7AQ8TE49 926 aaPredicted RBP27.87■■■□□ 2.05
CBX3-204ENST00000456948 FSD1Q9BTV5 496 aa27.87■■■□□ 2.05
CBX3-204ENST00000456948 R3HDMLQ9H3Y0 253 aa27.87■■■□□ 2.05
CBX3-204ENST00000456948 DCP1AQ9NPI6 582 aaPredicted RBP27.87■■■□□ 2.05
CBX3-204ENST00000456948 STAP2Q9UGK3 403 aa27.87■■■□□ 2.05
CBX3-204ENST00000456948 DOCK1Q14185 1865 aa27.87■■■□□ 2.05
CBX3-204ENST00000456948 TRIM75PA6NK02 468 aa27.86■■■□□ 2.05
CBX3-204ENST00000456948 PKN2Q16513 984 aaKnown RBP27.86■■■□□ 2.05
CBX3-204ENST00000456948 ZNF280CQ8ND82 737 aa27.86■■■□□ 2.05
CBX3-204ENST00000456948 SDR42E1Q8WUS8 393 aa27.86■■■□□ 2.05
CBX3-204ENST00000456948 APPBP2Q92624 585 aa27.86■■■□□ 2.05
CBX3-204ENST00000456948 ERO1AQ96HE7 468 aa27.86■■■□□ 2.05
CBX3-204ENST00000456948 LNPKQ9C0E8 428 aa27.86■■■□□ 2.05
CBX3-204ENST00000456948 SLC4A4Q9Y6R1 1079 aa27.86■■■□□ 2.05
CBX3-204ENST00000456948 A0A0G2JLL6 359 aaPredicted RBP27.85■■■□□ 2.05
CBX3-204ENST00000456948 PDE1AP54750 535 aa27.85■■■□□ 2.05
CBX3-204ENST00000456948 PRRT2Q7Z6L0 340 aaPredicted RBP27.85■■■□□ 2.05
CBX3-204ENST00000456948 CHD1LQ86WJ1 897 aa27.85■■■□□ 2.05
CBX3-204ENST00000456948 PDHXO00330 501 aa27.84■■■□□ 2.05
CBX3-204ENST00000456948 IGHDP01880 384 aa27.84■■■□□ 2.05
CBX3-204ENST00000456948 SP3Q02447 781 aa27.84■■■□□ 2.05
CBX3-204ENST00000456948 CABP5Q9NP86 173 aa27.84■■■□□ 2.05
CBX3-204ENST00000456948 GNAT2P19087 354 aa27.83■■■□□ 2.05
CBX3-204ENST00000456948 IRX6P78412 446 aaPredicted RBP27.83■■■□□ 2.05
CBX3-204ENST00000456948 NUCB1Q02818 461 aa27.83■■■□□ 2.05
CBX3-204ENST00000456948 SPP2Q13103 211 aa27.83■■■□□ 2.05
CBX3-204ENST00000456948 CERKLQ49MI3 558 aaPredicted RBP27.83■■■□□ 2.05
CBX3-204ENST00000456948 GADL1Q6ZQY3 521 aa27.83■■■□□ 2.05
CBX3-204ENST00000456948 EVI5LQ96CN4 794 aa27.83■■■□□ 2.05
CBX3-204ENST00000456948 PARK7Q99497 189 aaKnown RBP27.83■■■□□ 2.05
CBX3-204ENST00000456948 PUS7LQ9H0K6 701 aaKnown RBP27.83■■■□□ 2.05
CBX3-204ENST00000456948 TLR2O60603 784 aa27.82■■■□□ 2.04
CBX3-204ENST00000456948 SLFNL1Q499Z3 407 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms