RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 GDPD2Q9HCC8 539 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 MRVI1Q9Y6F6 885 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 SLC5A1P13866 664 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 SLC27A3Q5K4L6 730 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 CCDC102BQ68D86 513 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 FOXR1Q6PIV2 292 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 PI16Q6UXB8 463 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 TPTE2Q6XPS3 522 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 LRRN4CLQ8ND94 238 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 TATDN2Q93075 761 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 TTC14Q96N46 770 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 TM6SF1Q9BZW5 370 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 UQCRFS1P1P0C7P4 283 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 PHKA1P46020 1223 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 CHRNDQ07001 517 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 CCDC144BQ3MJ40 725 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 ANKRD18AQ8IVF6 992 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 FMNL3Q8IVF7 1028 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 DRC7Q8IY82 874 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 CCDC144CPQ8IYA2 1237 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 SRRTQ9BXP5 876 aaKnown RBP8.75□□□□□ -1.01
HDAC9-218ENST00000456174 ZSWIM6Q9HCJ5 1215 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 CYP46A1Q9Y6A2 500 aa8.75□□□□□ -1.01
HDAC9-218ENST00000456174 EP400Q96L91 3159 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 SNAP23O00161 211 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 TADA3O75528 432 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 SEC31AO94979 1220 aaKnown RBP8.74□□□□□ -1.01
HDAC9-218ENST00000456174 ZFYP08048 801 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-218ENST00000456174 CPA1P15085 419 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 PSMA5P28066 241 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 ARID4AP29374 1257 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-218ENST00000456174 HNRNPH1P31943 449 aaKnown RBP8.74□□□□□ -1.01
HDAC9-218ENST00000456174 ELF1P32519 619 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 MNAT1P51948 309 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 ADCY2Q08462 1091 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 KCNV1Q6PIU1 500 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 RUFY3Q7L099 469 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 UBXN4Q92575 508 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 NLRP3Q96P20 1036 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 HMG20BQ9P0W2 317 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 MCM8Q9UJA3 840 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 LAMA4Q16363 1823 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 MAST3O60307 1309 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.74□□□□□ -1.01
HDAC9-218ENST00000456174 NPHP1O15259 732 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 AK2P54819 239 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 CCZ1BP86790 482 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 CCZ1P86791 482 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-218ENST00000456174 TTF1Q15361 905 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-218ENST00000456174 VPS53Q5VIR6 699 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 TEX11Q8IYF3 940 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 CCDC24Q8N4L8 307 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 GIMAP7Q8NHV1 300 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 KAT2BQ92831 832 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 FUT8Q9BYC5 575 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 ETAA1Q9NY74 926 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 CLIP2Q9UDT6 1046 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 DOCK2Q92608 1830 aa8.74□□□□□ -1.01
HDAC9-218ENST00000456174 CARMIL3Q8ND23 1372 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 H3BQF6 201 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 M0R2C6 588 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 PPFIA4O75335 1185 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 IPO7O95373 1038 aaKnown RBP8.73□□□□□ -1.01
HDAC9-218ENST00000456174 GRIK3Q13003 919 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 NEDD9Q14511 834 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 WASHC4Q2M389 1173 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 NAIF1Q69YI7 327 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-218ENST00000456174 SARM1Q6SZW1 724 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 OSBP2Q969R2 916 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 DSCC1Q9BVC3 393 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 TRIM5Q9C035 493 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC9-218ENST00000456174 TAF6LQ9Y6J9 622 aa8.73□□□□□ -1.01
HDAC9-218ENST00000456174 TNRC6CQ9HCJ0 1690 aaKnown RBP8.73□□□□□ -1.01
HDAC9-218ENST00000456174 EFCAB8A8MWE9 144 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 MAP2K7O14733 419 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 SKILP12757 684 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 GCFC2P16383 781 aaKnown RBP8.72□□□□□ -1.01
HDAC9-218ENST00000456174 KCNJ6P48051 423 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 TYRO3Q06418 890 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 DDR1Q08345 913 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 NFIXQ14938 502 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 LRRC31Q6UY01 552 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 GBP6Q6ZN66 633 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 CELF1Q92879 486 aaKnown RBP8.72□□□□□ -1.01
HDAC9-218ENST00000456174 CBX8Q9HC52 389 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 PIH1D3Q9NQM4 214 aaKnown RBP8.72□□□□□ -1.01
HDAC9-218ENST00000456174 LIMCH1Q9UPQ0 1083 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 CNPY2Q9Y2B0 182 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 ZBTB12Q9Y330 459 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-218ENST00000456174 TMCO5BA8MYB1 307 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 ERLIN2O94905 339 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 HSPD1P10809 573 aaKnown RBP8.72□□□□□ -1.01
HDAC9-218ENST00000456174 BCAMP50895 628 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 SNW1Q13573 536 aaKnown RBP8.72□□□□□ -1.01
HDAC9-218ENST00000456174 KRT32Q14532 448 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 CRYMQ14894 314 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 TXNRD1Q16881 649 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 TTC19Q6DKK2 380 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-218ENST00000456174 BLOC1S2Q6QNY1 142 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms