RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 IDH1O75874 414 aaKnown RBP14.6□□□□□ -0.07
PDGFB-204ENST00000455790 PPP4CP60510 307 aa14.6□□□□□ -0.07
PDGFB-204ENST00000455790 DYNLL1P63167 89 aaKnown RBP14.6□□□□□ -0.07
PDGFB-204ENST00000455790 RHPN1Q8TCX5 695 aa14.6□□□□□ -0.07
PDGFB-204ENST00000455790 TGFBRAP1Q8WUH2 860 aa14.6□□□□□ -0.07
PDGFB-204ENST00000455790 NOL10Q9BSC4 688 aaKnown RBP14.6□□□□□ -0.07
PDGFB-204ENST00000455790 DNAJC18Q9H819 358 aa14.6□□□□□ -0.07
PDGFB-204ENST00000455790 CDK5RAP2Q96SN8 1893 aa14.6□□□□□ -0.07
PDGFB-204ENST00000455790 BAG3O95817 575 aa14.59□□□□□ -0.07
PDGFB-204ENST00000455790 MS4A1P11836 297 aa14.59□□□□□ -0.07
PDGFB-204ENST00000455790 SHROOM1Q2M3G4 852 aaPredicted RBP14.59□□□□□ -0.07
PDGFB-204ENST00000455790 GADL1Q6ZQY3 521 aa14.59□□□□□ -0.07
PDGFB-204ENST00000455790 ERC1Q8IUD2 1116 aa14.59□□□□□ -0.07
PDGFB-204ENST00000455790 MIGA1Q8NAN2 632 aa14.59□□□□□ -0.07
PDGFB-204ENST00000455790 TRIM47Q96LD4 638 aa14.59□□□□□ -0.07
PDGFB-204ENST00000455790 PARK7Q99497 189 aaKnown RBP14.59□□□□□ -0.07
PDGFB-204ENST00000455790 DDX19BQ9UMR2 479 aa14.59□□□□□ -0.07
PDGFB-204ENST00000455790 FOCADQ5VW36 1801 aa14.59□□□□□ -0.07
PDGFB-204ENST00000455790 PDE4DIPQ5VU43 2346 aa14.58□□□□□ -0.08
PDGFB-204ENST00000455790 ATAD5Q96QE3 1844 aa14.58□□□□□ -0.08
PDGFB-204ENST00000455790 BCRP11274 1271 aa14.58□□□□□ -0.08
PDGFB-204ENST00000455790 PLCG2P16885 1265 aa14.58□□□□□ -0.08
PDGFB-204ENST00000455790 CYP7A1P22680 504 aa14.58□□□□□ -0.08
PDGFB-204ENST00000455790 JAG1P78504 1218 aa14.58□□□□□ -0.08
PDGFB-204ENST00000455790 SLC4A8Q2Y0W8 1093 aa14.58□□□□□ -0.08
PDGFB-204ENST00000455790 MAGEB6Q8N7X4 407 aa14.58□□□□□ -0.08
PDGFB-204ENST00000455790 ZNF333Q96JL9 665 aa14.58□□□□□ -0.08
PDGFB-204ENST00000455790 SAP30BPQ9UHR5 308 aaKnown RBP14.58□□□□□ -0.08
PDGFB-204ENST00000455790 MYCP01106 439 aaPredicted RBP14.57□□□□□ -0.08
PDGFB-204ENST00000455790 CAP2P40123 477 aa14.57□□□□□ -0.08
PDGFB-204ENST00000455790 PSMC4P43686 418 aa14.57□□□□□ -0.08
PDGFB-204ENST00000455790 KIF22Q14807 665 aa14.57□□□□□ -0.08
PDGFB-204ENST00000455790 SLC9C1Q4G0N8 1177 aa14.57□□□□□ -0.08
PDGFB-204ENST00000455790 TREML2Q5T2D2 321 aa14.57□□□□□ -0.08
PDGFB-204ENST00000455790 FASTKD5Q7L8L6 764 aaKnown RBP14.57□□□□□ -0.08
PDGFB-204ENST00000455790 RPAP2Q8IXW5 612 aaPredicted RBP14.57□□□□□ -0.08
PDGFB-204ENST00000455790 SH3TC2Q8TF17 1288 aa14.57□□□□□ -0.08
PDGFB-204ENST00000455790 BCL11AQ9H165 835 aa14.57□□□□□ -0.08
PDGFB-204ENST00000455790 PALD1Q9ULE6 856 aa14.57□□□□□ -0.08
PDGFB-204ENST00000455790 RBBP6Q7Z6E9 1792 aaKnown RBP14.57□□□□□ -0.08
PDGFB-204ENST00000455790 LOC285556D6RIA3 1793 aa14.56□□□□□ -0.08
PDGFB-204ENST00000455790 OSBPP22059 807 aa14.56□□□□□ -0.08
PDGFB-204ENST00000455790 SPP2Q13103 211 aa14.56□□□□□ -0.08
PDGFB-204ENST00000455790 ARHGEF6Q15052 776 aa14.56□□□□□ -0.08
PDGFB-204ENST00000455790 HSP90AB4PQ58FF6 505 aa14.56□□□□□ -0.08
PDGFB-204ENST00000455790 KIF1BPQ96EK5 621 aa14.56□□□□□ -0.08
PDGFB-204ENST00000455790 PI4KBQ9UBF8 816 aa14.56□□□□□ -0.08
PDGFB-204ENST00000455790 HERC5Q9UII4 1024 aaKnown RBP14.56□□□□□ -0.08
PDGFB-204ENST00000455790 AGTPBP1Q9UPW5 1226 aa14.56□□□□□ -0.08
PDGFB-204ENST00000455790 EN2P19622 333 aaPredicted RBP14.55□□□□□ -0.08
PDGFB-204ENST00000455790 METTL16Q86W50 562 aaKnown RBP14.55□□□□□ -0.08
PDGFB-204ENST00000455790 EDC3Q96F86 508 aaKnown RBP14.55□□□□□ -0.08
PDGFB-204ENST00000455790 DHX36Q9H2U1 1008 aaKnown RBP14.55□□□□□ -0.08
PDGFB-204ENST00000455790 SRRDQ9UH36 339 aa14.55□□□□□ -0.08
PDGFB-204ENST00000455790 SLC45A1Q9Y2W3 748 aa14.55□□□□□ -0.08
PDGFB-204ENST00000455790 KIAA0100Q14667 2235 aaKnown RBP14.55□□□□□ -0.08
PDGFB-204ENST00000455790 DDX60LQ5H9U9 1706 aaKnown RBP14.55□□□□□ -0.08
PDGFB-204ENST00000455790 USP17L5A8MUK1 530 aa14.54□□□□□ -0.08
PDGFB-204ENST00000455790 IGSF3O75054 1194 aa14.54□□□□□ -0.08
PDGFB-204ENST00000455790 HMMRO75330 724 aa14.54□□□□□ -0.08
PDGFB-204ENST00000455790 GDF11O95390 407 aa14.54□□□□□ -0.08
PDGFB-204ENST00000455790 FMNL1O95466 1100 aaPredicted RBP14.54□□□□□ -0.08
PDGFB-204ENST00000455790 HMGCS2P54868 508 aa14.54□□□□□ -0.08
PDGFB-204ENST00000455790 MAP3K12Q12852 859 aa14.54□□□□□ -0.08
PDGFB-204ENST00000455790 CLASRPQ8N2M8 674 aaKnown RBP14.54□□□□□ -0.08
PDGFB-204ENST00000455790 ZNF280CQ8ND82 737 aa14.54□□□□□ -0.08
PDGFB-204ENST00000455790 MYPNQ86TC9 1320 aa14.53□□□□□ -0.08
PDGFB-204ENST00000455790 GOLIM4O00461 696 aa14.53□□□□□ -0.08
PDGFB-204ENST00000455790 GNRH1P01148 92 aa14.53□□□□□ -0.08
PDGFB-204ENST00000455790 PDE6AP16499 860 aa14.53□□□□□ -0.08
PDGFB-204ENST00000455790 PRKCZQ05513 592 aa14.53□□□□□ -0.08
PDGFB-204ENST00000455790 CRACR2BQ8N4Y2 399 aaPredicted RBP14.53□□□□□ -0.08
PDGFB-204ENST00000455790 SMCR8Q8TEV9 937 aaPredicted RBP14.53□□□□□ -0.08
PDGFB-204ENST00000455790 DNAJC2Q99543 621 aaKnown RBP14.53□□□□□ -0.08
PDGFB-204ENST00000455790 RIOK1Q9BRS2 568 aaKnown RBP14.53□□□□□ -0.08
PDGFB-204ENST00000455790 IFIT2P09913 472 aaKnown RBP14.52□□□□□ -0.09
PDGFB-204ENST00000455790 USP5P45974 858 aa14.52□□□□□ -0.09
PDGFB-204ENST00000455790 PRMT2P55345 433 aa14.52□□□□□ -0.09
PDGFB-204ENST00000455790 EVX2Q03828 476 aa14.52□□□□□ -0.09
PDGFB-204ENST00000455790 MTMR2Q13614 643 aa14.52□□□□□ -0.09
PDGFB-204ENST00000455790 PDE3AQ14432 1141 aa14.52□□□□□ -0.09
PDGFB-204ENST00000455790 PROCA1Q8NCQ7 364 aaPredicted RBP14.52□□□□□ -0.09
PDGFB-204ENST00000455790 ZBTB21Q9ULJ3 1066 aa14.52□□□□□ -0.09
PDGFB-204ENST00000455790 GABRQQ9UN88 632 aa14.52□□□□□ -0.09
PDGFB-204ENST00000455790 RAB11FIP3O75154 756 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 HLA-DOAP06340 250 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 ASNSP08243 561 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 FCGRTP55899 365 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 MTFR1Q15390 333 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 SLFNL1Q499Z3 407 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 SH3D19Q5HYK7 790 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 NBPF11Q86T75 865 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 FOXP4Q8IVH2 680 aaPredicted RBP14.51□□□□□ -0.09
PDGFB-204ENST00000455790 ANKRD13CQ8N6S4 541 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDGFB-204ENST00000455790 WDR18Q9BV38 432 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 TRIM34Q9BYJ4 488 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 MYH1P12882 1939 aa14.51□□□□□ -0.09
PDGFB-204ENST00000455790 MGAMO43451 1857 aa14.5□□□□□ -0.09
PDGFB-204ENST00000455790 ZNF532Q9HCE3 1301 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms