RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 RGS19P49795 217 aa21.01■□□□□ 0.95
USP39-208ENST00000455732 DYNLL1P63167 89 aaKnown RBP21.01■□□□□ 0.95
USP39-208ENST00000455732 MIGA1Q8NAN2 632 aa21.01■□□□□ 0.95
USP39-208ENST00000455732 RIOK1Q9BRS2 568 aaKnown RBP21.01■□□□□ 0.95
USP39-208ENST00000455732 DHX36Q9H2U1 1008 aaKnown RBP21.01■□□□□ 0.95
USP39-208ENST00000455732 KCNH4Q9UQ05 1017 aa21.01■□□□□ 0.95
USP39-208ENST00000455732 MYH7P12883 1935 aa21■□□□□ 0.95
USP39-208ENST00000455732 SCYL3Q8IZE3 742 aa21■□□□□ 0.95
USP39-208ENST00000455732 TGFBRAP1Q8WUH2 860 aa21■□□□□ 0.95
USP39-208ENST00000455732 DDX24Q9GZR7 859 aaKnown RBP eCLIP21■□□□□ 0.951e-6■■■□□ 14.8
USP39-208ENST00000455732 RWDD1Q9H446 243 aaPredicted RBP21■□□□□ 0.95
USP39-208ENST00000455732 SALL3Q9BXA9 1300 aa21■□□□□ 0.95
USP39-208ENST00000455732 ZNF532Q9HCE3 1301 aa21■□□□□ 0.95
USP39-208ENST00000455732 CTNND1O60716 968 aaKnown RBP20.99■□□□□ 0.95
USP39-208ENST00000455732 ADD2P35612 726 aa20.99■□□□□ 0.95
USP39-208ENST00000455732 SMC5Q8IY18 1101 aa20.99■□□□□ 0.95
USP39-208ENST00000455732 ZCCHC17Q9NP64 241 aaKnown RBP20.99■□□□□ 0.95
USP39-208ENST00000455732 BTBD19C9JJ37 291 aa20.98■□□□□ 0.95
USP39-208ENST00000455732 ERC2O15083 957 aa20.98■□□□□ 0.95
USP39-208ENST00000455732 TAF1CQ15572 869 aaPredicted RBP20.98■□□□□ 0.95
USP39-208ENST00000455732 ANKRD45Q5TZF3 282 aa20.98■□□□□ 0.95
USP39-208ENST00000455732 MAPKAPK5Q8IW41 473 aa20.98■□□□□ 0.95
USP39-208ENST00000455732 PI4KBQ9UBF8 816 aa20.98■□□□□ 0.95
USP39-208ENST00000455732 ZBTB47Q9UFB7 747 aaPredicted RBP20.98■□□□□ 0.95
USP39-208ENST00000455732 MAGEB6P1A0A0J9YX57 407 aa20.97■□□□□ 0.95
USP39-208ENST00000455732 FAM196BA6NMK8 535 aa20.97■□□□□ 0.95
USP39-208ENST00000455732 PTPRAP18433 802 aa20.97■□□□□ 0.95
USP39-208ENST00000455732 MX1P20591 662 aa20.97■□□□□ 0.95
USP39-208ENST00000455732 MOGSQ13724 837 aa20.97■□□□□ 0.95
USP39-208ENST00000455732 UBE3CQ15386 1083 aa20.97■□□□□ 0.95
USP39-208ENST00000455732 PKN2Q16513 984 aaKnown RBP20.97■□□□□ 0.95
USP39-208ENST00000455732 TSHZ3Q63HK5 1081 aa20.97■□□□□ 0.95
USP39-208ENST00000455732 METTL16Q86W50 562 aaKnown RBP20.97■□□□□ 0.95
USP39-208ENST00000455732 PI4K2BQ8TCG2 481 aa20.97■□□□□ 0.95
USP39-208ENST00000455732 OTUD7AQ8TE49 926 aaPredicted RBP20.97■□□□□ 0.95
USP39-208ENST00000455732 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.97■□□□□ 0.95
USP39-208ENST00000455732 HERC5Q9UII4 1024 aaKnown RBP20.97■□□□□ 0.95
USP39-208ENST00000455732 CXCL11O14625 94 aa20.96■□□□□ 0.95
USP39-208ENST00000455732 GLRX3O76003 335 aaKnown RBP20.96■□□□□ 0.95
USP39-208ENST00000455732 KBTBD3Q8NAB2 608 aa20.96■□□□□ 0.95
USP39-208ENST00000455732 ZFYVE28Q9HCC9 887 aa20.96■□□□□ 0.95
USP39-208ENST00000455732 PICK1Q9NRD5 415 aa20.96■□□□□ 0.95
USP39-208ENST00000455732 HTTP42858 3142 aa20.95■□□□□ 0.94
USP39-208ENST00000455732 ZSCAN25Q6NSZ9 544 aa20.95■□□□□ 0.94
USP39-208ENST00000455732 AFG3L2Q9Y4W6 797 aa20.95■□□□□ 0.94
USP39-208ENST00000455732 ZHX2Q9Y6X8 837 aa20.95■□□□□ 0.94
USP39-208ENST00000455732 DDX60LQ5H9U9 1706 aaKnown RBP20.95■□□□□ 0.94
USP39-208ENST00000455732 IGHDP01880 384 aa20.94■□□□□ 0.94
USP39-208ENST00000455732 USP5P45974 858 aa20.94■□□□□ 0.94
USP39-208ENST00000455732 SP3Q02447 781 aa20.94■□□□□ 0.94
USP39-208ENST00000455732 RRP1BQ14684 758 aaKnown RBP20.94■□□□□ 0.94
USP39-208ENST00000455732 ANKRD23Q86SG2 305 aa20.94■□□□□ 0.94
USP39-208ENST00000455732 CRNKL1Q9BZJ0 848 aaKnown RBP20.94■□□□□ 0.94
USP39-208ENST00000455732 STAP2Q9UGK3 403 aa20.94■□□□□ 0.94
USP39-208ENST00000455732 NAV1Q8NEY1 1877 aa20.94■□□□□ 0.94
USP39-208ENST00000455732 ZSWIM8A7E2V4 1837 aa20.93■□□□□ 0.94
USP39-208ENST00000455732 TLR2O60603 784 aa20.93■□□□□ 0.94
USP39-208ENST00000455732 HLA-DOAP06340 250 aa20.93■□□□□ 0.94
USP39-208ENST00000455732 SOX10P56693 466 aa20.93■□□□□ 0.94
USP39-208ENST00000455732 CAP1Q01518 475 aa20.93■□□□□ 0.94
USP39-208ENST00000455732 FOXP4Q8IVH2 680 aaPredicted RBP20.93■□□□□ 0.94
USP39-208ENST00000455732 ERO1AQ96HE7 468 aa20.93■□□□□ 0.94
USP39-208ENST00000455732 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.93■□□□□ 0.94
USP39-208ENST00000455732 PALD1Q9ULE6 856 aa20.93■□□□□ 0.94
USP39-208ENST00000455732 A0A0G2JLL6 359 aaPredicted RBP20.92■□□□□ 0.94
USP39-208ENST00000455732 CAP2P40123 477 aa20.92■□□□□ 0.94
USP39-208ENST00000455732 GPAT2Q6NUI2 795 aa20.92■□□□□ 0.94
USP39-208ENST00000455732 FBXO46Q6PJ61 603 aaPredicted RBP20.92■□□□□ 0.94
USP39-208ENST00000455732 OTOP1Q7RTM1 612 aa20.92■□□□□ 0.94
USP39-208ENST00000455732 PRRT2Q7Z6L0 340 aaPredicted RBP20.92■□□□□ 0.94
USP39-208ENST00000455732 LCORLQ8N3X6 602 aa20.92■□□□□ 0.94
USP39-208ENST00000455732 CD99L2Q8TCZ2 262 aa20.92■□□□□ 0.94
USP39-208ENST00000455732 DNAJC18Q9H819 358 aa20.92■□□□□ 0.94
USP39-208ENST00000455732 SAP30BPQ9UHR5 308 aaKnown RBP20.92■□□□□ 0.94
USP39-208ENST00000455732 HPS5Q9UPZ3 1129 aa20.92■□□□□ 0.94
USP39-208ENST00000455732 LOC285556D6RIA3 1793 aa20.91■□□□□ 0.94
USP39-208ENST00000455732 PDHXO00330 501 aa20.91■□□□□ 0.94
USP39-208ENST00000455732 CHGBP05060 677 aa20.91■□□□□ 0.94
USP39-208ENST00000455732 NUCB1Q02818 461 aa20.91■□□□□ 0.94
USP39-208ENST00000455732 SLFNL1Q499Z3 407 aa20.91■□□□□ 0.94
USP39-208ENST00000455732 CCDC84Q86UT8 332 aaPredicted RBP20.91■□□□□ 0.94
USP39-208ENST00000455732 EHD4Q9H223 541 aa20.91■□□□□ 0.94
USP39-208ENST00000455732 TRIM17Q9Y577 477 aa20.91■□□□□ 0.94
USP39-208ENST00000455732 ADGRA2Q96PE1 1338 aa20.9■□□□□ 0.94
USP39-208ENST00000455732 MBD4O95243 580 aa20.9■□□□□ 0.94
USP39-208ENST00000455732 ZFYP08048 801 aaPredicted RBP20.9■□□□□ 0.94
USP39-208ENST00000455732 PDE1AP54750 535 aa20.9■□□□□ 0.94
USP39-208ENST00000455732 IRX6P78412 446 aaPredicted RBP20.9■□□□□ 0.94
USP39-208ENST00000455732 LRRFIP1Q32MZ4 808 aaKnown RBP20.9■□□□□ 0.94
USP39-208ENST00000455732 LNPKQ9C0E8 428 aa20.9■□□□□ 0.94
USP39-208ENST00000455732 ARMT1Q9H993 441 aa20.9■□□□□ 0.94
USP39-208ENST00000455732 BAZ2AQ9UIF9 1905 aaKnown RBP20.89■□□□□ 0.93
USP39-208ENST00000455732 FASTKD5Q7L8L6 764 aaKnown RBP20.89■□□□□ 0.93
USP39-208ENST00000455732 TTC6Q86TZ1 520 aa20.89■□□□□ 0.93
USP39-208ENST00000455732 CHD1LQ86WJ1 897 aa20.89■□□□□ 0.93
USP39-208ENST00000455732 CRACR2BQ8N4Y2 399 aaPredicted RBP20.89■□□□□ 0.93
USP39-208ENST00000455732 APPBP2Q92624 585 aa20.89■□□□□ 0.93
USP39-208ENST00000455732 DCP1AQ9NPI6 582 aaPredicted RBP20.89■□□□□ 0.93
USP39-208ENST00000455732 MGAMO43451 1857 aa20.89■□□□□ 0.93
USP39-208ENST00000455732 TRIM75PA6NK02 468 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms