RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 DHX36Q9H2U1 1008 aaKnown RBP8.51□□□□□ -1.05
COMMD1-205ENST00000455659 HERC5Q9UII4 1024 aaKnown RBP8.51□□□□□ -1.05
COMMD1-205ENST00000455659 CASP8AP2Q9UKL3 1982 aa8.51□□□□□ -1.05
COMMD1-205ENST00000455659 TRIM6-TRIM34B2RNG4 842 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 M0R2C6 588 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 RNF113AO15541 343 aaKnown RBP8.5□□□□□ -1.05
COMMD1-205ENST00000455659 GPAA1O43292 621 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 SLURP2P0DP57 97 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 GJA5P36382 358 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 KIF23Q02241 960 aaPredicted RBP8.5□□□□□ -1.05
COMMD1-205ENST00000455659 NOL9Q5SY16 702 aaKnown RBP8.5□□□□□ -1.05
COMMD1-205ENST00000455659 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 AMOTL1Q8IY63 956 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 SCYL3Q8IZE3 742 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 EVI5LQ96CN4 794 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 PUS7LQ9H0K6 701 aaKnown RBP8.5□□□□□ -1.05
COMMD1-205ENST00000455659 DNAJC18Q9H819 358 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.5□□□□□ -1.05
COMMD1-205ENST00000455659 PICK1Q9NRD5 415 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 WBP1LQ9NX94 342 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 PI4KBQ9UBF8 816 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 PALD1Q9ULE6 856 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 GREB1LQ9C091 1923 aaPredicted RBP8.5□□□□□ -1.05
COMMD1-205ENST00000455659 CENPFP49454 3210 aa8.5□□□□□ -1.05
COMMD1-205ENST00000455659 MYH4Q9Y623 1939 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 MANSC4A6NHS7 340 aaPredicted RBP8.49□□□□□ -1.05
COMMD1-205ENST00000455659 FOXN1O15353 648 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 CA12O43570 354 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 PDE4AP27815 886 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 PPIL2Q13356 520 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 CENPQQ7L2Z9 268 aaPredicted RBP8.49□□□□□ -1.05
COMMD1-205ENST00000455659 ERO1BQ86YB8 467 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 REM2Q8IYK8 340 aaPredicted RBP8.49□□□□□ -1.05
COMMD1-205ENST00000455659 OSBP2Q969R2 916 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 EHD4Q9H223 541 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 DCP1AQ9NPI6 582 aaPredicted RBP8.49□□□□□ -1.05
COMMD1-205ENST00000455659 MCM9Q9NXL9 1143 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.49□□□□□ -1.05
COMMD1-205ENST00000455659 SERPINB13Q9UIV8 391 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 TSKSQ9UJT2 592 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 ZNF112Q9UJU3 913 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 SLC4A4Q9Y6R1 1079 aa8.49□□□□□ -1.05
COMMD1-205ENST00000455659 PHF20L1A8MW92 1017 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 PRKAB2O43741 272 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 TBC1D12O60347 775 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 GDF11O95390 407 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 POLR3DP05423 398 aaPredicted RBP8.48□□□□□ -1.05
COMMD1-205ENST00000455659 HSPA8P11142 646 aaKnown RBP8.48□□□□□ -1.05
COMMD1-205ENST00000455659 TDO2P48775 406 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 CTCFP49711 727 aaPredicted RBP8.48□□□□□ -1.05
COMMD1-205ENST00000455659 ZMYM1Q5SVZ6 1142 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 TTC22Q5TAA0 569 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 TTC6Q86TZ1 520 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 RILPL2Q969X0 211 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 CCDC136Q96JN2 1154 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 OSBPL3Q9H4L5 887 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 ATP8A2Q9NTI2 1148 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 SAGE1Q9NXZ1 904 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 ARPP21Q9UBL0 812 aaPredicted RBP8.48□□□□□ -1.05
COMMD1-205ENST00000455659 ROBO3Q96MS0 1386 aa8.48□□□□□ -1.05
COMMD1-205ENST00000455659 CCL15-CCL14A0A0B4J2E2 113 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 A0A0D9SFI3 127 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 IRF6O14896 467 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 CTNND1O60716 968 aaKnown RBP8.47□□□□□ -1.05
COMMD1-205ENST00000455659 ASNSP08243 561 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 CYP2D6P10635 497 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 GSPT1P15170 499 aaKnown RBP8.47□□□□□ -1.05
COMMD1-205ENST00000455659 GNAT2P19087 354 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 GTF2A2P52657 109 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 MAP3K10Q02779 954 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 PPATQ06203 517 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 SNAPC2Q13487 334 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 CCL15Q16663 113 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 CCDC84Q86UT8 332 aaPredicted RBP8.47□□□□□ -1.05
COMMD1-205ENST00000455659 SLC44A5Q8NCS7 719 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 BRI3BPQ8WY22 251 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 STRBPQ96SI9 672 aaKnown RBP8.47□□□□□ -1.05
COMMD1-205ENST00000455659 SEC62Q99442 399 aaKnown RBP8.47□□□□□ -1.05
COMMD1-205ENST00000455659 EPB41L4AQ9HCS5 686 aaPredicted RBP8.47□□□□□ -1.05
COMMD1-205ENST00000455659 DIAPH3Q9NSV4 1193 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 ZBTB21Q9ULJ3 1066 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 ZSWIM8A7E2V4 1837 aa8.47□□□□□ -1.05
COMMD1-205ENST00000455659 PARP14Q460N5 1801 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 CYP2D7A0A087X1C5 515 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 TRIM75PA6NK02 468 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 IGF2BP3O00425 579 aaKnown RBP eCLIP8.46□□□□□ -1.06
COMMD1-205ENST00000455659 CETPP11597 493 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 PTPRAP18433 802 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 SHMT1P34896 483 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 CAP2P40123 477 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 PLCD1P51178 756 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 LBX1P52954 281 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 EVX2Q03828 476 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 NMIQ13287 307 aaPredicted RBP8.46□□□□□ -1.06
COMMD1-205ENST00000455659 RRP1BQ14684 758 aaKnown RBP8.46□□□□□ -1.06
COMMD1-205ENST00000455659 SHROOM1Q2M3G4 852 aaPredicted RBP8.46□□□□□ -1.06
COMMD1-205ENST00000455659 CCDC129Q6ZRS4 1044 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 METTL16Q86W50 562 aaKnown RBP8.46□□□□□ -1.06
COMMD1-205ENST00000455659 IFNL1Q8IU54 200 aa8.46□□□□□ -1.06
COMMD1-205ENST00000455659 FAM227BQ96M60 508 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms