RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 TBC1D12O60347 775 aa30.11■■■□□ 2.41
MSH2-203ENST00000454849 CETPP11597 493 aa30.11■■■□□ 2.41
MSH2-203ENST00000454849 PTPRAP18433 802 aa30.11■■■□□ 2.41
MSH2-203ENST00000454849 HDAC1Q13547 482 aaPredicted RBP30.11■■■□□ 2.41
MSH2-203ENST00000454849 CDK5RAP2Q96SN8 1893 aa30.1■■■□□ 2.41
MSH2-203ENST00000454849 BTBD19C9JJ37 291 aa30.1■■■□□ 2.41
MSH2-203ENST00000454849 CTNND1O60716 968 aaKnown RBP30.1■■■□□ 2.41
MSH2-203ENST00000454849 ADD2P35612 726 aa30.1■■■□□ 2.41
MSH2-203ENST00000454849 LCORLQ8N3X6 602 aa30.1■■■□□ 2.41
MSH2-203ENST00000454849 DHX36Q9H2U1 1008 aaKnown RBP30.1■■■□□ 2.41
MSH2-203ENST00000454849 ARMT1Q9H993 441 aa30.1■■■□□ 2.41
MSH2-203ENST00000454849 COL2A1P02458 1487 aaPredicted RBP30.09■■■□□ 2.41
MSH2-203ENST00000454849 CRACR2BQ8N4Y2 399 aaPredicted RBP30.09■■■□□ 2.41
MSH2-203ENST00000454849 MCOLN1Q9GZU1 580 aa30.09■■■□□ 2.41
MSH2-203ENST00000454849 SHROOM1Q2M3G4 852 aaPredicted RBP30.08■■■□□ 2.41
MSH2-203ENST00000454849 TRIM34Q9BYJ4 488 aa30.08■■■□□ 2.41
MSH2-203ENST00000454849 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.08■■■□□ 2.41
MSH2-203ENST00000454849 DNAJC18Q9H819 358 aa30.08■■■□□ 2.41
MSH2-203ENST00000454849 ZBTB47Q9UFB7 747 aaPredicted RBP30.08■■■□□ 2.41
MSH2-203ENST00000454849 MBD4O95243 580 aa30.07■■■□□ 2.4
MSH2-203ENST00000454849 IGHDP01880 384 aa30.07■■■□□ 2.4
MSH2-203ENST00000454849 TAF1CQ15572 869 aaPredicted RBP30.07■■■□□ 2.4
MSH2-203ENST00000454849 B4GALNT3Q6L9W6 998 aa30.07■■■□□ 2.4
MSH2-203ENST00000454849 SDR42E1Q8WUS8 393 aa30.07■■■□□ 2.4
MSH2-203ENST00000454849 KCNH4Q9UQ05 1017 aa30.07■■■□□ 2.4
MSH2-203ENST00000454849 PRKAB2O43741 272 aa30.06■■■□□ 2.4
MSH2-203ENST00000454849 JAG1P78504 1218 aa30.06■■■□□ 2.4
MSH2-203ENST00000454849 EVX2Q03828 476 aa30.06■■■□□ 2.4
MSH2-203ENST00000454849 CERS3Q8IU89 383 aa30.06■■■□□ 2.4
MSH2-203ENST00000454849 CFHR5Q9BXR6 569 aa30.06■■■□□ 2.4
MSH2-203ENST00000454849 CRNKL1Q9BZJ0 848 aaKnown RBP30.06■■■□□ 2.4
MSH2-203ENST00000454849 HERC5Q9UII4 1024 aaKnown RBP30.06■■■□□ 2.4
MSH2-203ENST00000454849 TRIM75PA6NK02 468 aa30.05■■■□□ 2.4
MSH2-203ENST00000454849 FKTNO75072 461 aa30.05■■■□□ 2.4
MSH2-203ENST00000454849 HLA-DOAP06340 250 aa30.05■■■□□ 2.4
MSH2-203ENST00000454849 TMED8Q6PL24 325 aaPredicted RBP30.05■■■□□ 2.4
MSH2-203ENST00000454849 FOXP4Q8IVH2 680 aaPredicted RBP30.05■■■□□ 2.4
MSH2-203ENST00000454849 GCC1Q96CN9 775 aa30.05■■■□□ 2.4
MSH2-203ENST00000454849 ABHD8Q96I13 439 aa30.05■■■□□ 2.4
MSH2-203ENST00000454849 RWDD1Q9H446 243 aaPredicted RBP30.05■■■□□ 2.4
MSH2-203ENST00000454849 AFG3L2Q9Y4W6 797 aa30.05■■■□□ 2.4
MSH2-203ENST00000454849 SIPA1L1O43166 1804 aa30.04■■■□□ 2.4
MSH2-203ENST00000454849 FOCADQ5VW36 1801 aa30.04■■■□□ 2.4
MSH2-203ENST00000454849 GDF11O95390 407 aa30.04■■■□□ 2.4
MSH2-203ENST00000454849 CAP2P40123 477 aa30.04■■■□□ 2.4
MSH2-203ENST00000454849 MOGSQ13724 837 aa30.04■■■□□ 2.4
MSH2-203ENST00000454849 PI4K2BQ8TCG2 481 aa30.04■■■□□ 2.4
MSH2-203ENST00000454849 LAMB1P07942 1786 aa30.03■■■□□ 2.4
MSH2-203ENST00000454849 MX1P20591 662 aa30.03■■■□□ 2.4
MSH2-203ENST00000454849 PLCD1P51178 756 aa30.03■■■□□ 2.4
MSH2-203ENST00000454849 POLR3DP05423 398 aaPredicted RBP30.02■■■□□ 2.4
MSH2-203ENST00000454849 CYP2D6P10635 497 aa30.02■■■□□ 2.4
MSH2-203ENST00000454849 AAMPQ13685 434 aa30.02■■■□□ 2.4
MSH2-203ENST00000454849 UBE3CQ15386 1083 aa30.02■■■□□ 2.4
MSH2-203ENST00000454849 GADL1Q6ZQY3 521 aa30.02■■■□□ 2.4
MSH2-203ENST00000454849 CTU1Q7Z7A3 348 aaKnown RBP30.02■■■□□ 2.4
MSH2-203ENST00000454849 KBTBD3Q8NAB2 608 aa30.02■■■□□ 2.4
MSH2-203ENST00000454849 LNPKQ9C0E8 428 aa30.02■■■□□ 2.4
MSH2-203ENST00000454849 PUS7LQ9H0K6 701 aaKnown RBP30.02■■■□□ 2.4
MSH2-203ENST00000454849 ZFYVE28Q9HCC9 887 aa30.02■■■□□ 2.4
MSH2-203ENST00000454849 MCM9Q9NXL9 1143 aa30.02■■■□□ 2.4
MSH2-203ENST00000454849 TTC41PQ6P2S7 1318 aa30.01■■■□□ 2.4
MSH2-203ENST00000454849 PDHXO00330 501 aa30.01■■■□□ 2.39
MSH2-203ENST00000454849 CXCL11O14625 94 aa30.01■■■□□ 2.39
MSH2-203ENST00000454849 ZSCAN25Q6NSZ9 544 aa30.01■■■□□ 2.39
MSH2-203ENST00000454849 MYH1P12882 1939 aa30■■■□□ 2.39
MSH2-203ENST00000454849 DOCK1Q14185 1865 aa30■■■□□ 2.39
MSH2-203ENST00000454849 ECM2O94769 699 aaPredicted RBP30■■■□□ 2.39
MSH2-203ENST00000454849 SPP2Q13103 211 aa30■■■□□ 2.39
MSH2-203ENST00000454849 METTL16Q86W50 562 aaKnown RBP30■■■□□ 2.39
MSH2-203ENST00000454849 DCP1AQ9NPI6 582 aaPredicted RBP30■■■□□ 2.39
MSH2-203ENST00000454849 ERC2O15083 957 aa29.99■■■□□ 2.39
MSH2-203ENST00000454849 GPAT2Q6NUI2 795 aa29.99■■■□□ 2.39
MSH2-203ENST00000454849 TTC6Q86TZ1 520 aa29.99■■■□□ 2.39
MSH2-203ENST00000454849 CD99L2Q8TCZ2 262 aa29.99■■■□□ 2.39
MSH2-203ENST00000454849 A0A0G2JLL6 359 aaPredicted RBP29.98■■■□□ 2.39
MSH2-203ENST00000454849 GLRX3O76003 335 aaKnown RBP29.98■■■□□ 2.39
MSH2-203ENST00000454849 NOM1Q5C9Z4 860 aaKnown RBP29.98■■■□□ 2.39
MSH2-203ENST00000454849 PRRT2Q7Z6L0 340 aaPredicted RBP29.98■■■□□ 2.39
MSH2-203ENST00000454849 ANKRD23Q86SG2 305 aa29.98■■■□□ 2.39
MSH2-203ENST00000454849 SERPINB13Q9UIV8 391 aa29.98■■■□□ 2.39
MSH2-203ENST00000454849 SALL3Q9BXA9 1300 aa29.97■■■□□ 2.39
MSH2-203ENST00000454849 SMIM22K7EJ46 135 aa29.97■■■□□ 2.39
MSH2-203ENST00000454849 RNF113AO15541 343 aaKnown RBP29.97■■■□□ 2.39
MSH2-203ENST00000454849 CAP1Q01518 475 aa29.97■■■□□ 2.39
MSH2-203ENST00000454849 SLC4A4Q9Y6R1 1079 aa29.97■■■□□ 2.39
MSH2-203ENST00000454849 CYP2D7A0A087X1C5 515 aa29.96■■■□□ 2.39
MSH2-203ENST00000454849 CCDC85CA6NKD9 419 aa29.96■■■□□ 2.39
MSH2-203ENST00000454849 USP17L5A8MUK1 530 aa29.96■■■□□ 2.39
MSH2-203ENST00000454849 SMC5Q8IY18 1101 aa29.96■■■□□ 2.39
MSH2-203ENST00000454849 OSBP2Q969R2 916 aa29.96■■■□□ 2.39
MSH2-203ENST00000454849 CYP2C8P10632 490 aa29.95■■■□□ 2.39
MSH2-203ENST00000454849 SP3Q02447 781 aa29.95■■■□□ 2.39
MSH2-203ENST00000454849 ZNF280CQ8ND82 737 aa29.95■■■□□ 2.39
MSH2-203ENST00000454849 FSD1Q9BTV5 496 aa29.95■■■□□ 2.39
MSH2-203ENST00000454849 CPA4Q9UI42 421 aa29.95■■■□□ 2.39
MSH2-203ENST00000454849 PHIPQ8WWQ0 1821 aa29.94■■■□□ 2.38
MSH2-203ENST00000454849 GH2P01242 217 aa29.94■■■□□ 2.38
MSH2-203ENST00000454849 PDE1AP54750 535 aa29.94■■■□□ 2.38
MSH2-203ENST00000454849 FASTKD5Q7L8L6 764 aaKnown RBP29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms