RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 LAMB1P07942 1786 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 SEMA3EO15041 775 aa14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 NT5C2P49902 561 aa14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 MDM2Q00987 491 aaPredicted RBP14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 ITPK1Q13572 414 aa14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 SAFBQ15424 915 aaKnown RBP eCLIP14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 DDB1Q16531 1140 aa14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 KRBA2Q6ZNG9 492 aa14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 CCAR2Q8N163 923 aaKnown RBP14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 KRI1Q8N9T8 703 aaKnown RBP14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 BRIP1Q9BX63 1249 aa14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 RNF26Q9BY78 433 aaPredicted RBP14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 COL4A1P02462 1669 aa14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 KAT6BQ8WYB5 2073 aa14.43□□□□□ -0.1
ECHDC1-209ENST00000454591 CBFA2T2O43439 604 aa14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 ATP6V1AP38606 617 aa14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 TDO2P48775 406 aa14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 BCAMP50895 628 aa14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 MYL5Q02045 173 aa14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 PPARAQ07869 468 aa14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 TPD52L1Q16890 204 aaPredicted RBP14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 CT47A1Q5JQC4 288 aaPredicted RBP14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 SLC10A5Q5PT55 438 aa14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 SLC26A6Q9BXS9 759 aa14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 XPO4Q9C0E2 1151 aaKnown RBP14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 GNL3LQ9NVN8 582 aaKnown RBP14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 SPATA31A5Q5VU36 1347 aa14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 SPATA31A7Q8IWB4 1347 aa14.42□□□□□ -0.1
ECHDC1-209ENST00000454591 MYH13Q9UKX3 1938 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 ERICH2A1L162 156 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 MARCKSP29966 332 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 TOB1P50616 345 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 GNL2Q13823 731 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 CEP135Q66GS9 1140 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 METTL16Q86W50 562 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 ZNF654Q8IZM8 581 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 STK11IPQ8N1F8 1099 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 TRIML1Q8N9V2 468 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 MARCH10Q8NA82 808 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 SYTL4Q96C24 671 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 C16orf45Q96MC5 204 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 RIOK1Q9BRS2 568 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 BSDC1Q9NW68 430 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 HOOK1Q9UJC3 728 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 FBXO2Q9UK22 296 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 KCNH3Q9ULD8 1083 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 CEP131Q9UPN4 1083 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 NIP7Q9Y221 180 aaKnown RBP eCLIP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 COL1A1P02452 1464 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 A0A087WWV3 80 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 PRKAB2O43741 272 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 RXRAP19793 462 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 SARSP49591 514 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 FANCCQ00597 558 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 ARID5BQ14865 1188 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 KANK3Q6NY19 840 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 DIS3L2Q8IYB7 885 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 FANCBQ8NB91 859 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 CCDC112Q8NEF3 446 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 ESR2Q92731 530 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 ERCC4Q92889 916 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 IFNKQ9P0W0 207 aa14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 SRPRBQ9Y5M8 271 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-209ENST00000454591 NRDCO43847 1150 aa14.4□□□□□ -0.1
ECHDC1-209ENST00000454591 CYP7A1P22680 504 aa14.4□□□□□ -0.1
ECHDC1-209ENST00000454591 FUT2Q10981 343 aa14.4□□□□□ -0.1
ECHDC1-209ENST00000454591 PTPN14Q15678 1187 aa14.4□□□□□ -0.1
ECHDC1-209ENST00000454591 ARMCX5Q6P1M9 558 aa14.4□□□□□ -0.1
ECHDC1-209ENST00000454591 FCHSD1Q86WN1 690 aa14.4□□□□□ -0.1
ECHDC1-209ENST00000454591 SPATA20Q8TB22 786 aa14.4□□□□□ -0.1
ECHDC1-209ENST00000454591 MYL10Q9BUA6 226 aa14.4□□□□□ -0.1
ECHDC1-209ENST00000454591 TMX1Q9H3N1 280 aa14.4□□□□□ -0.1
ECHDC1-209ENST00000454591 INCENPQ9NQS7 918 aa14.4□□□□□ -0.1
ECHDC1-209ENST00000454591 LRP2BPQ9P2M1 347 aa14.4□□□□□ -0.1
ECHDC1-209ENST00000454591 CNTNAP4Q9C0A0 1308 aa14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 MYH2Q9UKX2 1941 aa14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 MAGEB6P1A0A0J9YX57 407 aa14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 BTBD18B2RXH4 712 aa14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 CCP110O43303 1012 aa14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 PRPF3O43395 683 aaKnown RBP14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 BMP15O95972 392 aa14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 CALM1P0DP23 149 aa14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 CALM2P0DP24 149 aa14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 CALM3P0DP25 149 aa14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 FILIP1Q7Z7B0 1213 aa14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 RBM28Q9NW13 759 aaKnown RBP14.39□□□□□ -0.11
ECHDC1-209ENST00000454591 SNAP23O00161 211 aa14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 ORC4O43929 436 aa14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 GUCY1A2P33402 732 aa14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 NCBP1Q09161 790 aaKnown RBP14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 LONRF3Q496Y0 759 aa14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 FBXO33Q7Z6M2 555 aa14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 ANKRD18AQ8IVF6 992 aa14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 FOXP4Q8IVH2 680 aaPredicted RBP14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 MLKLQ8NB16 471 aa14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 CNNM3Q8NE01 707 aa14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 CLIC6Q96NY7 704 aa14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 UBAC1Q9BSL1 405 aa14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 DACH1Q9UI36 760 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms