RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 NEURL1BA8MQ27 555 aa10.88□□□□□ -0.67
RFC3P1-201ENST00000454568 H7C1D1 291 aa10.88□□□□□ -0.67
RFC3P1-201ENST00000454568 VAMP4O75379 141 aa10.88□□□□□ -0.67
RFC3P1-201ENST00000454568 IGKV5-2P06315 115 aa10.88□□□□□ -0.67
RFC3P1-201ENST00000454568 TBC1D16Q8TBP0 767 aa10.88□□□□□ -0.67
RFC3P1-201ENST00000454568 CDC5LQ99459 802 aaKnown RBP10.88□□□□□ -0.67
RFC3P1-201ENST00000454568 OCSTAMPQ9BR26 566 aa10.88□□□□□ -0.67
RFC3P1-201ENST00000454568 POLLQ9UGP5 575 aa10.88□□□□□ -0.67
RFC3P1-201ENST00000454568 PHF20L1A8MW92 1017 aa10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 ECE2O60344 883 aa10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 UFL1O94874 794 aa10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 CTSWP56202 376 aa10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 FOXD4L5Q5VV16 416 aaPredicted RBP10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 LYPD4Q6UWN0 246 aa10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 UBE3BQ7Z3V4 1068 aa10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 DNAAF4Q8WXU2 420 aa10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 GPR101Q96P66 508 aaPredicted RBP10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 TMPRSS4Q9NRS4 437 aa10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 CNOT7Q9UIV1 285 aaKnown RBP10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 GGA1Q9UJY5 639 aa10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 ABT1Q9ULW3 272 aaKnown RBP10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 LRRC37AA6NMS7 1700 aa10.87□□□□□ -0.67
RFC3P1-201ENST00000454568 YDJCA8MPS7 323 aa10.86□□□□□ -0.67
RFC3P1-201ENST00000454568 ERVH48-1M5A8F1 160 aa10.86□□□□□ -0.67
RFC3P1-201ENST00000454568 LILRA1O75019 489 aa10.86□□□□□ -0.67
RFC3P1-201ENST00000454568 CELA2BP08218 269 aaPredicted RBP10.86□□□□□ -0.67
RFC3P1-201ENST00000454568 RAB15P59190 212 aa10.86□□□□□ -0.67
RFC3P1-201ENST00000454568 SH3D19Q5HYK7 790 aa10.86□□□□□ -0.67
RFC3P1-201ENST00000454568 TTLL11Q8NHH1 800 aa10.86□□□□□ -0.67
RFC3P1-201ENST00000454568 PODXL2Q9NZ53 605 aa10.86□□□□□ -0.67
RFC3P1-201ENST00000454568 LTBP1Q14766 1721 aa10.86□□□□□ -0.67
RFC3P1-201ENST00000454568 XDHP47989 1333 aa10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 CACNA1FO60840 1977 aa10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 H7C1W4 665 aa10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 PSMD14O00487 310 aa10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 HSPA1AP0DMV8 641 aaKnown RBP10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 HSPA1BP0DMV9 641 aaKnown RBP10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 IGHMBP2P38935 993 aaKnown RBP10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 GCKRQ14397 625 aa10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 DEFB115Q30KQ5 88 aa10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 LINS1Q8NG48 757 aa10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 GREM2Q9H772 168 aa10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 DUOX1Q9NRD9 1551 aa10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 ADAMTSL1Q8N6G6 1762 aa10.85□□□□□ -0.67
RFC3P1-201ENST00000454568 F6X3S4 739 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 TRAF5O00463 557 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 AP1G2O75843 785 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 ATP2B4P23634 1241 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 RNF144AP50876 292 aaPredicted RBP10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 GRM1Q13255 1194 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 DPF2Q92785 391 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 MPHOSPH8Q99549 860 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 KCNQ5Q9NR82 932 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 CHMP3Q9Y3E7 222 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 CNTNAP1P78357 1384 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 COL4A1P02462 1669 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 MYH3P11055 1940 aa10.84□□□□□ -0.67
RFC3P1-201ENST00000454568 ESPNB1AK53 854 aa10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 RPS12P25398 132 aaKnown RBP10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 ADD1P35611 737 aaKnown RBP10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 FMR1Q06787 632 aaKnown RBP eCLIP10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 TBC1D10BQ4KMP7 808 aaPredicted RBP10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 SLC4A10Q6U841 1118 aa10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 PODNQ7Z5L7 613 aa10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 TRIM22Q8IYM9 498 aa10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 BEND7Q8N7W2 519 aaPredicted RBP10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 DDRGK1Q96HY6 314 aa10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 GLIS2Q9BZE0 524 aaPredicted RBP10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 ZNF408Q9H9D4 720 aa10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 BSDC1Q9NW68 430 aaPredicted RBP10.83□□□□□ -0.68
RFC3P1-201ENST00000454568 SHTN1A0MZ66 631 aa10.82□□□□□ -0.68
RFC3P1-201ENST00000454568 ANKRD18BA2A2Z9 1011 aa10.82□□□□□ -0.68
RFC3P1-201ENST00000454568 CELF2O95319 508 aaKnown RBP10.82□□□□□ -0.68
RFC3P1-201ENST00000454568 GPC1P35052 558 aa10.82□□□□□ -0.68
RFC3P1-201ENST00000454568 HIRAP54198 1017 aaPredicted RBP10.82□□□□□ -0.68
RFC3P1-201ENST00000454568 GAS6Q14393 721 aa10.82□□□□□ -0.68
RFC3P1-201ENST00000454568 CDC37L1Q7L3B6 337 aa10.82□□□□□ -0.68
RFC3P1-201ENST00000454568 TRPM4Q8TD43 1214 aa10.82□□□□□ -0.68
RFC3P1-201ENST00000454568 AIDAQ96BJ3 306 aa10.82□□□□□ -0.68
RFC3P1-201ENST00000454568 C9orf78Q9NZ63 289 aaPredicted RBP10.82□□□□□ -0.68
RFC3P1-201ENST00000454568 MINPP1Q9UNW1 487 aa10.82□□□□□ -0.68
RFC3P1-201ENST00000454568 SPEF2Q9C093 1822 aa10.81□□□□□ -0.68
RFC3P1-201ENST00000454568 RASSF10A6NK89 507 aa10.81□□□□□ -0.68
RFC3P1-201ENST00000454568 KCNJ4P48050 445 aa10.81□□□□□ -0.68
RFC3P1-201ENST00000454568 CCT4P50991 539 aaKnown RBP10.81□□□□□ -0.68
RFC3P1-201ENST00000454568 COL13A1Q5TAT6 717 aaPredicted RBP10.81□□□□□ -0.68
RFC3P1-201ENST00000454568 PRICKLE2Q7Z3G6 844 aa10.81□□□□□ -0.68
RFC3P1-201ENST00000454568 DCPSQ96C86 337 aaKnown RBP10.81□□□□□ -0.68
RFC3P1-201ENST00000454568 PLA2G12BQ9BX93 195 aa10.81□□□□□ -0.68
RFC3P1-201ENST00000454568 ANKRD2Q9GZV1 360 aa10.81□□□□□ -0.68
RFC3P1-201ENST00000454568 RTL9Q8NET4 1388 aa10.8□□□□□ -0.68
RFC3P1-201ENST00000454568 USP17L3A6NCW0 530 aa10.8□□□□□ -0.68
RFC3P1-201ENST00000454568 USP17L4A6NCW7 530 aa10.8□□□□□ -0.68
RFC3P1-201ENST00000454568 CSF1RP07333 972 aa10.8□□□□□ -0.68
RFC3P1-201ENST00000454568 VIL1P09327 827 aaKnown RBP10.8□□□□□ -0.68
RFC3P1-201ENST00000454568 ECE1P42892 770 aa10.8□□□□□ -0.68
RFC3P1-201ENST00000454568 IFIT5Q13325 482 aaKnown RBP10.8□□□□□ -0.68
RFC3P1-201ENST00000454568 TAF7LQ5H9L4 462 aa10.8□□□□□ -0.68
RFC3P1-201ENST00000454568 BEND3Q5T5X7 828 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms