RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 SCRN1Q12765 414 aa15.41■□□□□ 0.06
LINC00343-203ENST00000454555 RASGRF1Q13972 1273 aa15.41■□□□□ 0.06
LINC00343-203ENST00000454555 SCARF1Q14162 830 aa15.41■□□□□ 0.06
LINC00343-203ENST00000454555 NSUN7Q8NE18 718 aaKnown RBP15.41■□□□□ 0.06
LINC00343-203ENST00000454555 COL4A5P29400 1685 aa15.4■□□□□ 0.06
LINC00343-203ENST00000454555 JAK2O60674 1132 aa15.4■□□□□ 0.06
LINC00343-203ENST00000454555 TNNT1P13805 278 aa15.4■□□□□ 0.06
LINC00343-203ENST00000454555 SPATA5Q8NB90 893 aa15.4■□□□□ 0.06
LINC00343-203ENST00000454555 TCEANC2Q96MN5 208 aa15.4■□□□□ 0.06
LINC00343-203ENST00000454555 IMPACTQ9P2X3 320 aa15.4■□□□□ 0.06
LINC00343-203ENST00000454555 IQSEC3Q9UPP2 1182 aaPredicted RBP15.4■□□□□ 0.06
LINC00343-203ENST00000454555 FAM205AQ6ZU69 1335 aa15.4■□□□□ 0.06
LINC00343-203ENST00000454555 SALL1Q9NSC2 1324 aa15.4■□□□□ 0.06
LINC00343-203ENST00000454555 YDJCA8MPS7 323 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 BECN2A8MW95 431 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 ADD1P35611 737 aaKnown RBP15.39■□□□□ 0.05
LINC00343-203ENST00000454555 CEP57L1Q8IYX8 460 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 CCDC112Q8NEF3 446 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 BPIFA3Q9BQP9 254 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 TAF6LQ9Y6J9 622 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 A0A1W2PQ27 194 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 A0A1W2PQ64 194 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 A0A1W2PQD8 194 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 FZD9O00144 591 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 EXOSC10Q01780 885 aaKnown RBP15.39■□□□□ 0.05
LINC00343-203ENST00000454555 STRIP1Q5VSL9 837 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 LRRC8AQ8IWT6 810 aa15.39■□□□□ 0.05
LINC00343-203ENST00000454555 CCAR1Q8IX12 1150 aaKnown RBP15.39■□□□□ 0.05
LINC00343-203ENST00000454555 KIF20AO95235 890 aa15.38■□□□□ 0.05
LINC00343-203ENST00000454555 KCNJ6P48051 423 aa15.38■□□□□ 0.05
LINC00343-203ENST00000454555 EVCP57679 992 aa15.38■□□□□ 0.05
LINC00343-203ENST00000454555 TPD52L1Q16890 204 aaPredicted RBP15.38■□□□□ 0.05
LINC00343-203ENST00000454555 WDR66Q8TBY9 1149 aa15.38■□□□□ 0.05
LINC00343-203ENST00000454555 OGFRQ9NZT2 677 aa15.38■□□□□ 0.05
LINC00343-203ENST00000454555 COL1A1P02452 1464 aaPredicted RBP15.37■□□□□ 0.05
LINC00343-203ENST00000454555 PTPDC1A2A3K4 754 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 USP17L3A6NCW0 530 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 USP17L4A6NCW7 530 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 DHX16O60231 1041 aaKnown RBP15.37■□□□□ 0.05
LINC00343-203ENST00000454555 ZSCAN20P17040 1043 aaPredicted RBP15.37■□□□□ 0.05
LINC00343-203ENST00000454555 ZAP70P43403 619 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 FKBP1AP62942 108 aaKnown RBP15.37■□□□□ 0.05
LINC00343-203ENST00000454555 GTF2IP78347 998 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 ZMYM1Q5SVZ6 1142 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 C9orf131Q5VYM1 1079 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 TTLL5Q6EMB2 1281 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 PI16Q6UXB8 463 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 USP17L1Q7RTZ2 530 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 ENGASEQ8NFI3 743 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 TBC1D22AQ8WUA7 517 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 DNAJC2Q99543 621 aaKnown RBP15.37■□□□□ 0.05
LINC00343-203ENST00000454555 KCNQ5Q9NR82 932 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 RNF181Q9P0P0 153 aa15.37■□□□□ 0.05
LINC00343-203ENST00000454555 NRDCO43847 1150 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 IGSF3O75054 1194 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 CEP135Q66GS9 1140 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 CACTINQ8WUQ7 758 aaKnown RBP15.36■□□□□ 0.05
LINC00343-203ENST00000454555 C16orf45Q96MC5 204 aaPredicted RBP15.36■□□□□ 0.05
LINC00343-203ENST00000454555 PAG1Q9NWQ8 432 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 RTEL1Q9NZ71 1219 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 CTNNA3Q9UI47 895 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 SBF1O95248 1867 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 YEATS4O95619 227 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 TPM4P67936 248 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 CXCL9Q07325 125 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 NCBP1Q09161 790 aaKnown RBP15.36■□□□□ 0.05
LINC00343-203ENST00000454555 LRMPQ12912 555 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 SNW1Q13573 536 aaKnown RBP15.36■□□□□ 0.05
LINC00343-203ENST00000454555 COL9A3Q14050 684 aaPredicted RBP15.36■□□□□ 0.05
LINC00343-203ENST00000454555 TTF1Q15361 905 aaPredicted RBP15.36■□□□□ 0.05
LINC00343-203ENST00000454555 DACT2Q5SW24 774 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 ADALQ6DHV7 355 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 KCNG4Q8TDN1 519 aa15.36■□□□□ 0.05
LINC00343-203ENST00000454555 MRPS27Q92552 414 aaKnown RBP15.36■□□□□ 0.05
LINC00343-203ENST00000454555 WDR19Q8NEZ3 1342 aa15.35■□□□□ 0.05
LINC00343-203ENST00000454555 ZC3H4Q9UPT8 1303 aaKnown RBP15.35■□□□□ 0.05
LINC00343-203ENST00000454555 ZFYP08048 801 aaPredicted RBP15.35■□□□□ 0.05
LINC00343-203ENST00000454555 VIL1P09327 827 aaKnown RBP15.35■□□□□ 0.05
LINC00343-203ENST00000454555 EIF6P56537 245 aaKnown RBP15.35■□□□□ 0.05
LINC00343-203ENST00000454555 TNIP1Q15025 636 aa15.35■□□□□ 0.05
LINC00343-203ENST00000454555 CIAPIN1Q6FI81 312 aa15.35■□□□□ 0.05
LINC00343-203ENST00000454555 BRAPQ7Z569 592 aa15.35■□□□□ 0.05
LINC00343-203ENST00000454555 OSBPL5Q9H0X9 879 aaPredicted RBP15.35■□□□□ 0.05
LINC00343-203ENST00000454555 NRBP1Q9UHY1 535 aa15.35■□□□□ 0.05
LINC00343-203ENST00000454555 NDUFB9Q9Y6M9 179 aa15.35■□□□□ 0.05
LINC00343-203ENST00000454555 AKAP11Q9UKA4 1901 aa15.35■□□□□ 0.05
LINC00343-203ENST00000454555 GOLGB1Q14789 3259 aaKnown RBP15.34■□□□□ 0.05
LINC00343-203ENST00000454555 GOLIM4O00461 696 aa15.34■□□□□ 0.05
LINC00343-203ENST00000454555 RAD17O75943 681 aa15.34■□□□□ 0.05
LINC00343-203ENST00000454555 PTPN14Q15678 1187 aa15.34■□□□□ 0.05
LINC00343-203ENST00000454555 NYAP1Q6ZVC0 841 aa15.34■□□□□ 0.05
LINC00343-203ENST00000454555 CCDC150Q8NCX0 1101 aa15.34■□□□□ 0.05
LINC00343-203ENST00000454555 TSC1Q92574 1164 aa15.34■□□□□ 0.05
LINC00343-203ENST00000454555 EDC3Q96F86 508 aaKnown RBP15.34■□□□□ 0.05
LINC00343-203ENST00000454555 DDX11Q96FC9 970 aa15.34■□□□□ 0.05
LINC00343-203ENST00000454555 SUGT1Q9Y2Z0 365 aa15.34■□□□□ 0.05
LINC00343-203ENST00000454555 CHD4Q14839 1912 aa15.34■□□□□ 0.05
LINC00343-203ENST00000454555 DICER1Q9UPY3 1922 aaKnown RBP15.34■□□□□ 0.05
LINC00343-203ENST00000454555 E7EWF7 191 aa15.34■□□□□ 0.05
LINC00343-203ENST00000454555 CTDNEP1O95476 244 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms