RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 AGTPBP1Q9UPW5 1226 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 CXCL11O14625 94 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SRGAP3O43295 1099 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 EVI5O60447 810 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ENTPD3O75355 529 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 GDF11O95390 407 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 TFRCP02786 760 aaKnown RBP7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 HOXD10P28358 340 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SPP2Q13103 211 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ADGRA1Q86SQ6 560 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 TRMT2AQ8IZ69 625 aaKnown RBP7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SH3RF3Q8TEJ3 882 aaPredicted RBP7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 HTATIP2Q9BUP3 242 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 DNAJC18Q9H819 358 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PAK6Q9NQU5 681 aaPredicted RBP7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SNRKQ9NRH2 765 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 HMG20BQ9P0W2 317 aa7.43□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PRUNE2Q8WUY3 3088 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PNMA6EA0A0J9YXQ4 647 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SEMA3EO15041 775 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SGPL1O95470 568 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 MCAMP43121 646 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 FASTKD5Q7L8L6 764 aaKnown RBP7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 MAPKAPK5Q8IW41 473 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 TEX11Q8IYF3 940 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 NKX2-3Q8TAU0 364 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 TRIB2Q92519 343 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 NEUROD6Q96NK8 337 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 OSBPL5Q9H0X9 879 aaPredicted RBP7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ASCC2Q9H1I8 757 aaPredicted RBP7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 C1orf115Q9H7X2 142 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 TXNRD2Q9NNW7 524 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 COPRSQ9NQ92 184 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 RAI14Q9P0K7 980 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SAP30BPQ9UHR5 308 aaKnown RBP7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 NDUFB9Q9Y6M9 179 aa7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SPTBN5Q9NRC6 3674 aaKnown RBP7.42□□□□□ -1.22
HLA-DPA3-207ENST00000454398 NAV1Q8NEY1 1877 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 CTNND1O60716 968 aaKnown RBP7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 HMGCRP04035 888 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 EVX2Q03828 476 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 MVPQ14764 893 aaKnown RBP7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ZYXQ15942 572 aaKnown RBP7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 CCL14Q16627 93 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 FAM110CQ1W6H9 321 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ALDH1L2Q3SY69 923 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ERICH6Q7L0X2 663 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ZGPATQ8N5A5 531 aaKnown RBP7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SPATA5Q8NB90 893 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ZNF280CQ8ND82 737 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 CLUAP1Q96AJ1 413 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 COA7Q96BR5 231 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 NSUN4Q96CB9 384 aaKnown RBP7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PAGR1Q9BTK6 254 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 CRISPLD2Q9H0B8 497 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 AATFQ9NY61 560 aaKnown RBP eCLIP7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 TLR7Q9NYK1 1049 aaKnown RBP7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 GJD2Q9UKL4 321 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 NR2E3Q9Y5X4 410 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PFASO15067 1338 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 FLT1P17948 1338 aa7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 COL2A1P02458 1487 aaPredicted RBP7.41□□□□□ -1.22
HLA-DPA3-207ENST00000454398 TTC28Q96AY4 2481 aa7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 GPR75-ASB3A0A0A6YYF3 556 aa7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 DLL1O00548 723 aa7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PRKAR2AP13861 404 aaKnown RBP7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 TRIM27P14373 513 aa7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 CYP2B6P20813 491 aa7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 MAGEA10P43363 369 aaPredicted RBP7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 IRX3P78415 501 aaPredicted RBP7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 IRF5Q13568 498 aa7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 GORABQ5T7V8 394 aa7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 FRAT1Q92837 279 aaPredicted RBP7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 API5Q9BZZ5 524 aaKnown RBP7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PORCNQ9H237 461 aa7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PNMA3Q9UL41 463 aa7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PALD1Q9ULE6 856 aa7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SLC45A1Q9Y2W3 748 aa7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PDS5AQ29RF7 1337 aaKnown RBP7.4□□□□□ -1.22
HLA-DPA3-207ENST00000454398 MYH1P12882 1939 aa7.4□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ZBTB22O15209 634 aa7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ARID4AP29374 1257 aaPredicted RBP7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CCND3P30281 292 aaPredicted RBP7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CAP2P40123 477 aa7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 RARSP54136 660 aaKnown RBP7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 DYNLL1P63167 89 aaKnown RBP7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 MIGA1Q8NAN2 632 aa7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 PROCA1Q8NCQ7 364 aaPredicted RBP7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 SLC17A8Q8NDX2 589 aa7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 PXYLP1Q8TE99 480 aa7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 TGFBRAP1Q8WUH2 860 aa7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 FAM163AQ96GL9 167 aaPredicted RBP7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 DBNDD2Q9BQY9 259 aa7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 PIH1D3Q9NQM4 214 aaKnown RBP7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 LRP2BPQ9P2M1 347 aa7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 FBXO3Q9UK99 471 aa7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ZBTB21Q9ULJ3 1066 aa7.39□□□□□ -1.23
HLA-DPA3-207ENST00000454398 LTBP2Q14767 1821 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms