RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 DACT2Q5SW24 774 aa25.02■■□□□ 1.6
CTU2-202ENST00000453996 RAB11FIP4Q86YS3 637 aa25.02■■□□□ 1.6
CTU2-202ENST00000453996 TMTC2Q8N394 836 aa25.02■■□□□ 1.6
CTU2-202ENST00000453996 ECM29Q5VYK3 1845 aa25.02■■□□□ 1.6
CTU2-202ENST00000453996 USP17L3A6NCW0 530 aa25.01■■□□□ 1.59
CTU2-202ENST00000453996 USP17L4A6NCW7 530 aa25.01■■□□□ 1.59
CTU2-202ENST00000453996 SOGA3Q5TF21 947 aa25.01■■□□□ 1.59
CTU2-202ENST00000453996 USP17L1Q7RTZ2 530 aa25.01■■□□□ 1.59
CTU2-202ENST00000453996 PIM2Q9P1W9 311 aa25.01■■□□□ 1.59
CTU2-202ENST00000453996 SLC12A7Q9Y666 1083 aa25.01■■□□□ 1.59
CTU2-202ENST00000453996 FLT1P17948 1338 aa25.01■■□□□ 1.59
CTU2-202ENST00000453996 CPLX1O14810 134 aa25■■□□□ 1.59
CTU2-202ENST00000453996 TRAK2O60296 914 aa25■■□□□ 1.59
CTU2-202ENST00000453996 NT5C2P49902 561 aa25■■□□□ 1.59
CTU2-202ENST00000453996 HHIPL2Q6UWX4 724 aa25■■□□□ 1.59
CTU2-202ENST00000453996 TEKT1Q969V4 418 aa25■■□□□ 1.59
CTU2-202ENST00000453996 TNKSO95271 1327 aa25■■□□□ 1.59
CTU2-202ENST00000453996 NID2Q14112 1375 aa25■■□□□ 1.59
CTU2-202ENST00000453996 SYNE3Q6ZMZ3 975 aa25■■□□□ 1.59
CTU2-202ENST00000453996 CDC37L1Q7L3B6 337 aa25■■□□□ 1.59
CTU2-202ENST00000453996 MICU3Q86XE3 530 aa25■■□□□ 1.59
CTU2-202ENST00000453996 IQCA1Q86XH1 822 aa25■■□□□ 1.59
CTU2-202ENST00000453996 ZSCAN10Q96SZ4 725 aaPredicted RBP25■■□□□ 1.59
CTU2-202ENST00000453996 POLR3DP05423 398 aaPredicted RBP24.99■■□□□ 1.59
CTU2-202ENST00000453996 SCNN1DP51172 638 aa24.99■■□□□ 1.59
CTU2-202ENST00000453996 SLC4A8Q2Y0W8 1093 aa24.99■■□□□ 1.59
CTU2-202ENST00000453996 CHAMP1Q96JM3 812 aa24.99■■□□□ 1.59
CTU2-202ENST00000453996 SAP30BPQ9UHR5 308 aaKnown RBP24.99■■□□□ 1.59
CTU2-202ENST00000453996 GOLGA8AA7E2F4 631 aa24.98■■□□□ 1.59
CTU2-202ENST00000453996 SEC23AQ15436 765 aa24.98■■□□□ 1.59
CTU2-202ENST00000453996 SKOR2Q2VWA4 1001 aaPredicted RBP24.98■■□□□ 1.59
CTU2-202ENST00000453996 TCHHQ07283 1943 aa24.97■■□□□ 1.59
CTU2-202ENST00000453996 H3BQV1 296 aa24.97■■□□□ 1.59
CTU2-202ENST00000453996 CDKL5O76039 1030 aa24.97■■□□□ 1.59
CTU2-202ENST00000453996 RXRAP19793 462 aa24.97■■□□□ 1.59
CTU2-202ENST00000453996 RCAN1P53805 252 aa24.97■■□□□ 1.59
CTU2-202ENST00000453996 FOXD4L6Q3SYB3 417 aaPredicted RBP24.97■■□□□ 1.59
CTU2-202ENST00000453996 IFFO2Q5TF58 517 aa24.97■■□□□ 1.59
CTU2-202ENST00000453996 CPLX2Q6PUV4 134 aaKnown RBP24.97■■□□□ 1.59
CTU2-202ENST00000453996 FOXD4L3Q6VB84 417 aaPredicted RBP24.97■■□□□ 1.59
CTU2-202ENST00000453996 ENAHQ8N8S7 591 aaPredicted RBP24.97■■□□□ 1.59
CTU2-202ENST00000453996 MRIQ9BWK5 157 aa24.97■■□□□ 1.59
CTU2-202ENST00000453996 CRKP46108 304 aa24.96■■□□□ 1.59
CTU2-202ENST00000453996 KIAA0825Q8IV33 1275 aa24.96■■□□□ 1.59
CTU2-202ENST00000453996 MYL10Q9BUA6 226 aa24.96■■□□□ 1.59
CTU2-202ENST00000453996 VPS33BQ9H267 617 aa24.96■■□□□ 1.59
CTU2-202ENST00000453996 LMBRD1Q9NUN5 540 aa24.96■■□□□ 1.59
CTU2-202ENST00000453996 HDLBPQ00341 1268 aaKnown RBP24.95■■□□□ 1.59
CTU2-202ENST00000453996 YDJCA8MPS7 323 aa24.95■■□□□ 1.58
CTU2-202ENST00000453996 FDPSP14324 419 aaKnown RBP24.95■■□□□ 1.58
CTU2-202ENST00000453996 CDC27P30260 824 aa24.95■■□□□ 1.58
CTU2-202ENST00000453996 ADD1P35611 737 aaKnown RBP24.95■■□□□ 1.58
CTU2-202ENST00000453996 PLCD1P51178 756 aa24.95■■□□□ 1.58
CTU2-202ENST00000453996 DALRD3Q5D0E6 543 aaKnown RBP24.95■■□□□ 1.58
CTU2-202ENST00000453996 IFIT1BQ5T764 474 aaKnown RBP24.95■■□□□ 1.58
CTU2-202ENST00000453996 CCDC144CPQ8IYA2 1237 aa24.95■■□□□ 1.58
CTU2-202ENST00000453996 ZNF654Q8IZM8 581 aa24.95■■□□□ 1.58
CTU2-202ENST00000453996 DYNLL2Q96FJ2 89 aa24.95■■□□□ 1.58
CTU2-202ENST00000453996 ZDHHC15Q96MV8 337 aa24.95■■□□□ 1.58
CTU2-202ENST00000453996 SGIP1Q9BQI5 828 aa24.95■■□□□ 1.58
CTU2-202ENST00000453996 ZNF287Q9HBT7 754 aa24.95■■□□□ 1.58
CTU2-202ENST00000453996 USP40Q9NVE5 1235 aa24.95■■□□□ 1.58
CTU2-202ENST00000453996 FER1L6Q2WGJ9 1857 aa24.94■■□□□ 1.58
CTU2-202ENST00000453996 TSPY2A6NKD2 308 aa24.94■■□□□ 1.58
CTU2-202ENST00000453996 FAM47AQ5JRC9 791 aa24.94■■□□□ 1.58
CTU2-202ENST00000453996 LARGE2Q8N3Y3 721 aa24.94■■□□□ 1.58
CTU2-202ENST00000453996 MKNK2Q9HBH9 465 aa24.94■■□□□ 1.58
CTU2-202ENST00000453996 ZNF277Q9NRM2 450 aaPredicted RBP24.94■■□□□ 1.58
CTU2-202ENST00000453996 PPP1R1BQ9UD71 204 aaPredicted RBP24.94■■□□□ 1.58
CTU2-202ENST00000453996 PPFIA3O75145 1194 aa24.93■■□□□ 1.58
CTU2-202ENST00000453996 PRPF40AO75400 957 aaKnown RBP24.93■■□□□ 1.58
CTU2-202ENST00000453996 APOBEC3HQ6NTF7 200 aaKnown RBP24.93■■□□□ 1.58
CTU2-202ENST00000453996 ORC3Q9UBD5 711 aaPredicted RBP24.93■■□□□ 1.58
CTU2-202ENST00000453996 COL4A5P29400 1685 aa24.93■■□□□ 1.58
CTU2-202ENST00000453996 PSDA5PKW4 1024 aaPredicted RBP24.93■■□□□ 1.58
CTU2-202ENST00000453996 PICALMQ13492 652 aa24.93■■□□□ 1.58
CTU2-202ENST00000453996 CDC42EP5Q6NZY7 148 aa24.93■■□□□ 1.58
CTU2-202ENST00000453996 FERMT3Q86UX7 667 aa24.93■■□□□ 1.58
CTU2-202ENST00000453996 FAM217BQ9NTX9 383 aaPredicted RBP24.93■■□□□ 1.58
CTU2-202ENST00000453996 CD2APQ9Y5K6 639 aa24.93■■□□□ 1.58
CTU2-202ENST00000453996 WDHD1O75717 1129 aaPredicted RBP24.92■■□□□ 1.58
CTU2-202ENST00000453996 RTN1Q16799 776 aa24.92■■□□□ 1.58
CTU2-202ENST00000453996 C16orf86Q6ZW13 317 aa24.92■■□□□ 1.58
CTU2-202ENST00000453996 SERPINA10Q9UK55 444 aa24.92■■□□□ 1.58
CTU2-202ENST00000453996 MYH15Q9Y2K3 1946 aa24.92■■□□□ 1.58
CTU2-202ENST00000453996 CATIPQ7Z7H3 387 aa24.91■■□□□ 1.58
CTU2-202ENST00000453996 MYO3BQ8WXR4 1341 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 CCDC196A0A1B0GTZ2 297 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 FOSBP53539 338 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 TFAP4Q01664 338 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 NTRK3Q16288 839 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 CNPY2Q9Y2B0 182 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 DDX49Q9Y6V7 483 aaKnown RBP24.9■■□□□ 1.58
CTU2-202ENST00000453996 MYH8P13535 1937 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 RBM5P52756 815 aaKnown RBP eCLIP24.9■■□□□ 1.58
CTU2-202ENST00000453996 RESTQ13127 1097 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 PPP2R5BQ15173 497 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 KLHL40Q2TBA0 621 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 ZNF444Q8N0Y2 327 aaPredicted RBP24.9■■□□□ 1.58
CTU2-202ENST00000453996 KLHL34Q8N239 644 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms