RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 ARPP21Q9UBL0 812 aaPredicted RBP23.12■■□□□ 1.29
NCL-205ENST00000453992 ATAD5Q96QE3 1844 aa23.11■■□□□ 1.29
NCL-205ENST00000453992 UBE2Q2LH0YL09 131 aa23.11■■□□□ 1.29
NCL-205ENST00000453992 POLR3DP05423 398 aaPredicted RBP23.11■■□□□ 1.29
NCL-205ENST00000453992 CHMLP26374 656 aa23.11■■□□□ 1.29
NCL-205ENST00000453992 MIGA2Q7L4E1 593 aa23.11■■□□□ 1.29
NCL-205ENST00000453992 ANKRD13AQ8IZ07 590 aa23.11■■□□□ 1.29
NCL-205ENST00000453992 RUFY2Q8WXA3 655 aa23.11■■□□□ 1.29
NCL-205ENST00000453992 EPB41L4AQ9HCS5 686 aaPredicted RBP23.11■■□□□ 1.29
NCL-205ENST00000453992 ZNF112Q9UJU3 913 aa23.11■■□□□ 1.29
NCL-205ENST00000453992 FZD1Q9UP38 647 aa23.11■■□□□ 1.29
NCL-205ENST00000453992 VEGFBP49765 207 aa23.1■■□□□ 1.29
NCL-205ENST00000453992 ZNF589Q86UQ0 364 aaPredicted RBP23.1■■□□□ 1.29
NCL-205ENST00000453992 WRNIP1Q96S55 665 aa23.1■■□□□ 1.29
NCL-205ENST00000453992 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.1■■□□□ 1.29
NCL-205ENST00000453992 THSD7BQ9C0I4 1608 aa23.09■■□□□ 1.29
NCL-205ENST00000453992 TDO2P48775 406 aa23.09■■□□□ 1.29
NCL-205ENST00000453992 MAP3K9P80192 1104 aa23.09■■□□□ 1.29
NCL-205ENST00000453992 DEFB115Q30KQ5 88 aa23.09■■□□□ 1.29
NCL-205ENST00000453992 SBK1Q52WX2 424 aa23.09■■□□□ 1.29
NCL-205ENST00000453992 RGMBQ6NW40 437 aa23.09■■□□□ 1.29
NCL-205ENST00000453992 IFNL3Q8IZI9 196 aa23.09■■□□□ 1.29
NCL-205ENST00000453992 TRIM34Q9BYJ4 488 aa23.09■■□□□ 1.29
NCL-205ENST00000453992 SERPINB13Q9UIV8 391 aa23.09■■□□□ 1.29
NCL-205ENST00000453992 ZMYM6O95789 1325 aa23.08■■□□□ 1.29
NCL-205ENST00000453992 LAMA4Q16363 1823 aa23.08■■□□□ 1.29
NCL-205ENST00000453992 APPP05067 770 aa23.08■■□□□ 1.29
NCL-205ENST00000453992 CRACR2BQ8N4Y2 399 aaPredicted RBP23.08■■□□□ 1.29
NCL-205ENST00000453992 CSADQ9Y600 493 aa23.08■■□□□ 1.29
NCL-205ENST00000453992 ROBO3Q96MS0 1386 aa23.07■■□□□ 1.28
NCL-205ENST00000453992 PHF20L1A8MW92 1017 aa23.07■■□□□ 1.28
NCL-205ENST00000453992 USP17L12C9JPN9 530 aa23.07■■□□□ 1.28
NCL-205ENST00000453992 USP17L21D6R901 530 aa23.07■■□□□ 1.28
NCL-205ENST00000453992 FOXP2O15409 715 aa23.07■■□□□ 1.28
NCL-205ENST00000453992 PLCD1P51178 756 aa23.07■■□□□ 1.28
NCL-205ENST00000453992 VGLL4Q14135 290 aa23.07■■□□□ 1.28
NCL-205ENST00000453992 NOL9Q5SY16 702 aaKnown RBP23.07■■□□□ 1.28
NCL-205ENST00000453992 C12orf60Q5U649 245 aa23.07■■□□□ 1.28
NCL-205ENST00000453992 CTR9Q6PD62 1173 aa23.07■■□□□ 1.28
NCL-205ENST00000453992 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.07■■□□□ 1.28
NCL-205ENST00000453992 NAPBQ9H115 298 aa23.07■■□□□ 1.28
NCL-205ENST00000453992 DNAJC18Q9H819 358 aa23.07■■□□□ 1.28
NCL-205ENST00000453992 HSPD1P10809 573 aaKnown RBP23.06■■□□□ 1.28
NCL-205ENST00000453992 ECE1P42892 770 aa23.06■■□□□ 1.28
NCL-205ENST00000453992 ZNF157P51786 506 aaPredicted RBP23.06■■□□□ 1.28
NCL-205ENST00000453992 GABPAQ06546 454 aa23.06■■□□□ 1.28
NCL-205ENST00000453992 ALX1Q15699 326 aa23.06■■□□□ 1.28
NCL-205ENST00000453992 SLC4A8Q2Y0W8 1093 aa23.06■■□□□ 1.28
NCL-205ENST00000453992 VPS53Q5VIR6 699 aa23.06■■□□□ 1.28
NCL-205ENST00000453992 CCDC102AQ96A19 550 aa23.06■■□□□ 1.28
NCL-205ENST00000453992 SWAP70Q9UH65 585 aa23.06■■□□□ 1.28
NCL-205ENST00000453992 FAM196BA6NMK8 535 aa23.05■■□□□ 1.28
NCL-205ENST00000453992 CTNND1O60716 968 aaKnown RBP23.05■■□□□ 1.28
NCL-205ENST00000453992 CDC45O75419 566 aa23.05■■□□□ 1.28
NCL-205ENST00000453992 SLC10A3P09131 477 aa23.05■■□□□ 1.28
NCL-205ENST00000453992 CYP2D6P10635 497 aa23.05■■□□□ 1.28
NCL-205ENST00000453992 SGSM2O43147 1006 aa23.04■■□□□ 1.28
NCL-205ENST00000453992 INPP5BP32019 993 aa23.04■■□□□ 1.28
NCL-205ENST00000453992 TATDN1Q6P1N9 297 aa23.04■■□□□ 1.28
NCL-205ENST00000453992 CASC1Q6TDU7 716 aa23.04■■□□□ 1.28
NCL-205ENST00000453992 PAXIP1Q6ZW49 1069 aaPredicted RBP23.04■■□□□ 1.28
NCL-205ENST00000453992 RASAL3Q86YV0 1011 aa23.04■■□□□ 1.28
NCL-205ENST00000453992 CLMNQ96JQ2 1002 aa23.04■■□□□ 1.28
NCL-205ENST00000453992 CAPNS2Q96L46 248 aa23.04■■□□□ 1.28
NCL-205ENST00000453992 DSCC1Q9BVC3 393 aa23.04■■□□□ 1.28
NCL-205ENST00000453992 SNCAIPQ9Y6H5 919 aa23.04■■□□□ 1.28
NCL-205ENST00000453992 PHIPQ8WWQ0 1821 aa23.03■■□□□ 1.28
NCL-205ENST00000453992 SLURP2P0DP57 97 aa23.03■■□□□ 1.28
NCL-205ENST00000453992 CYP4F22Q6NT55 531 aa23.03■■□□□ 1.28
NCL-205ENST00000453992 SCYL3Q8IZE3 742 aa23.03■■□□□ 1.28
NCL-205ENST00000453992 ZKSCAN4Q969J2 545 aaPredicted RBP23.03■■□□□ 1.28
NCL-205ENST00000453992 SLC10A4Q96EP9 437 aa23.03■■□□□ 1.28
NCL-205ENST00000453992 IL25Q9H293 177 aa23.03■■□□□ 1.28
NCL-205ENST00000453992 GINM1Q9NU53 330 aa23.03■■□□□ 1.28
NCL-205ENST00000453992 CYP2D7A0A087X1C5 515 aa23.02■■□□□ 1.28
NCL-205ENST00000453992 EVX2Q03828 476 aa23.02■■□□□ 1.28
NCL-205ENST00000453992 C16orf86Q6ZW13 317 aa23.02■■□□□ 1.28
NCL-205ENST00000453992 GTF3C3Q9Y5Q9 886 aa23.02■■□□□ 1.28
NCL-205ENST00000453992 WDR33Q9C0J8 1336 aaKnown RBP23.02■■□□□ 1.28
NCL-205ENST00000453992 SPDYE5A6NIY4 337 aa23.01■■□□□ 1.27
NCL-205ENST00000453992 MINDY4BA8MYZ0 360 aa23.01■■□□□ 1.27
NCL-205ENST00000453992 FAM155AB1AL88 458 aaPredicted RBP23.01■■□□□ 1.27
NCL-205ENST00000453992 ZBTB48P10074 688 aaPredicted RBP23.01■■□□□ 1.27
NCL-205ENST00000453992 SHMT1P34896 483 aa23.01■■□□□ 1.27
NCL-205ENST00000453992 CAP2P40123 477 aa23.01■■□□□ 1.27
NCL-205ENST00000453992 ESYT1Q9BSJ8 1104 aa23.01■■□□□ 1.27
NCL-205ENST00000453992 ELP3Q9H9T3 547 aa23.01■■□□□ 1.27
NCL-205ENST00000453992 PICK1Q9NRD5 415 aa23.01■■□□□ 1.27
NCL-205ENST00000453992 FGAP02671 866 aa23■■□□□ 1.27
NCL-205ENST00000453992 SLC3A2P08195 630 aaKnown RBP23■■□□□ 1.27
NCL-205ENST00000453992 PPARAQ07869 468 aa23■■□□□ 1.27
NCL-205ENST00000453992 NOGQ13253 232 aa23■■□□□ 1.27
NCL-205ENST00000453992 GRM1Q13255 1194 aa23■■□□□ 1.27
NCL-205ENST00000453992 ERO1BQ86YB8 467 aa23■■□□□ 1.27
NCL-205ENST00000453992 WNK4Q96J92 1243 aa23■■□□□ 1.27
NCL-205ENST00000453992 ANAPC4Q9UJX5 808 aa23■■□□□ 1.27
NCL-205ENST00000453992 SPRYD7Q5W111 196 aa22.99■■□□□ 1.27
NCL-205ENST00000453992 OPTNQ96CV9 577 aa22.99■■□□□ 1.27
NCL-205ENST00000453992 DYNLL2Q96FJ2 89 aa22.99■■□□□ 1.27
NCL-205ENST00000453992 ZNF287Q9HBT7 754 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms