RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 BICDL1Q6ZP65 573 aa21.05■□□□□ 0.96
MECP2-205ENST00000453960 ZNF654Q8IZM8 581 aa21.05■□□□□ 0.96
MECP2-205ENST00000453960 JMYQ8N9B5 988 aa21.05■□□□□ 0.96
MECP2-205ENST00000453960 KIAA1524Q8TCG1 905 aa21.05■□□□□ 0.96
MECP2-205ENST00000453960 ARHGEF1Q92888 912 aaKnown RBP21.05■□□□□ 0.96
MECP2-205ENST00000453960 SLC26A6Q9BXS9 759 aa21.05■□□□□ 0.96
MECP2-205ENST00000453960 USP21Q9UK80 565 aa21.05■□□□□ 0.96
MECP2-205ENST00000453960 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.05■□□□□ 0.96
MECP2-205ENST00000453960 DEXIO95424 95 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 MMP1P03956 469 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 TRIM29Q14134 588 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 AMIGO3Q86WK7 504 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 DHX40Q8IX18 779 aaKnown RBP21.04■□□□□ 0.96
MECP2-205ENST00000453960 CCDC144CPQ8IYA2 1237 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 ELOA2Q8IYF1 753 aaPredicted RBP21.04■□□□□ 0.96
MECP2-205ENST00000453960 FANCBQ8NB91 859 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 MRFAP1L1Q96HT8 127 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 ZNF830Q96NB3 372 aaPredicted RBP21.04■□□□□ 0.96
MECP2-205ENST00000453960 FOXP1Q9H334 677 aaPredicted RBP21.04■□□□□ 0.96
MECP2-205ENST00000453960 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.04■□□□□ 0.96
MECP2-205ENST00000453960 MROH7-TTC4A0A0A0MT08 1334 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 ZNF202O95125 648 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 KLRK1P26718 216 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 HIBADHP31937 336 aaKnown RBP21.04■□□□□ 0.96
MECP2-205ENST00000453960 NT5C2P49902 561 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 RBM6P78332 1123 aaKnown RBP21.04■□□□□ 0.96
MECP2-205ENST00000453960 NOLC1Q14978 699 aaKnown RBP eCLIP21.04■□□□□ 0.96
MECP2-205ENST00000453960 SMIM5Q71RC9 77 aa21.04■□□□□ 0.96
MECP2-205ENST00000453960 ORC4O43929 436 aa21.03■□□□□ 0.96
MECP2-205ENST00000453960 PFKFB1P16118 471 aa21.03■□□□□ 0.96
MECP2-205ENST00000453960 DYNLL1P63167 89 aaKnown RBP21.03■□□□□ 0.96
MECP2-205ENST00000453960 FUT2Q10981 343 aa21.03■□□□□ 0.96
MECP2-205ENST00000453960 SBK1Q52WX2 424 aa21.03■□□□□ 0.96
MECP2-205ENST00000453960 RRP12Q5JTH9 1297 aaKnown RBP21.03■□□□□ 0.96
MECP2-205ENST00000453960 NOSTRINQ8IVI9 506 aa21.03■□□□□ 0.96
MECP2-205ENST00000453960 TRIM22Q8IYM9 498 aa21.03■□□□□ 0.96
MECP2-205ENST00000453960 RNF26Q9BY78 433 aaPredicted RBP21.03■□□□□ 0.96
MECP2-205ENST00000453960 TNKSO95271 1327 aa21.02■□□□□ 0.96
MECP2-205ENST00000453960 GUCY1A2P33402 732 aa21.02■□□□□ 0.96
MECP2-205ENST00000453960 PLCB2Q00722 1185 aa21.02■□□□□ 0.96
MECP2-205ENST00000453960 MECOMQ03112 1051 aa21.02■□□□□ 0.96
MECP2-205ENST00000453960 RESP18Q5W5W9 173 aa21.02■□□□□ 0.96
MECP2-205ENST00000453960 CTR9Q6PD62 1173 aa21.02■□□□□ 0.96
MECP2-205ENST00000453960 C15orf52Q6ZUT6 534 aaKnown RBP21.02■□□□□ 0.96
MECP2-205ENST00000453960 CEP57L1Q8IYX8 460 aa21.02■□□□□ 0.96
MECP2-205ENST00000453960 UBAC1Q9BSL1 405 aa21.02■□□□□ 0.96
MECP2-205ENST00000453960 UBE2Q2LH0YL09 131 aa21.01■□□□□ 0.95
MECP2-205ENST00000453960 CUTAO60888 179 aa21.01■□□□□ 0.95
MECP2-205ENST00000453960 SHC4Q6S5L8 630 aa21.01■□□□□ 0.95
MECP2-205ENST00000453960 ENAHQ8N8S7 591 aaPredicted RBP21.01■□□□□ 0.95
MECP2-205ENST00000453960 SDF4Q9BRK5 362 aa21.01■□□□□ 0.95
MECP2-205ENST00000453960 ZKSCAN3Q9BRR0 538 aa21.01■□□□□ 0.95
MECP2-205ENST00000453960 TUBE1Q9UJT0 475 aa21.01■□□□□ 0.95
MECP2-205ENST00000453960 MINDY4BA8MYZ0 360 aa21.01■□□□□ 0.95
MECP2-205ENST00000453960 ZSCAN10Q96SZ4 725 aaPredicted RBP21.01■□□□□ 0.95
MECP2-205ENST00000453960 TRIM5Q9C035 493 aa21.01■□□□□ 0.95
MECP2-205ENST00000453960 NAT10Q9H0A0 1025 aaKnown RBP21.01■□□□□ 0.95
MECP2-205ENST00000453960 ATP8A2Q9NTI2 1148 aa21.01■□□□□ 0.95
MECP2-205ENST00000453960 GOLGA6L19H0YKK7 550 aa21■□□□□ 0.95
MECP2-205ENST00000453960 ADRA2BP18089 450 aa21■□□□□ 0.95
MECP2-205ENST00000453960 TOB1P50616 345 aaPredicted RBP21■□□□□ 0.95
MECP2-205ENST00000453960 SMIM22K7EJ46 135 aa20.99■□□□□ 0.95
MECP2-205ENST00000453960 NLRP12P59046 1061 aa20.99■□□□□ 0.95
MECP2-205ENST00000453960 MEX3CQ5U5Q3 659 aaKnown RBP20.99■□□□□ 0.95
MECP2-205ENST00000453960 MPNDQ8N594 471 aa20.99■□□□□ 0.95
MECP2-205ENST00000453960 DCP1AQ9NPI6 582 aaPredicted RBP20.99■□□□□ 0.95
MECP2-205ENST00000453960 TOMM22Q9NS69 142 aa20.99■□□□□ 0.95
MECP2-205ENST00000453960 LEMD3Q9Y2U8 911 aa20.99■□□□□ 0.95
MECP2-205ENST00000453960 SLC3A2P08195 630 aaKnown RBP20.98■□□□□ 0.95
MECP2-205ENST00000453960 TROAPQ12815 778 aa20.98■□□□□ 0.95
MECP2-205ENST00000453960 SAFBQ15424 915 aaKnown RBP eCLIP20.98■□□□□ 0.95
MECP2-205ENST00000453960 RILPL1Q5EBL4 403 aa20.98■□□□□ 0.95
MECP2-205ENST00000453960 DIS3L2Q8IYB7 885 aaKnown RBP20.98■□□□□ 0.95
MECP2-205ENST00000453960 SPC24Q8NBT2 197 aa20.98■□□□□ 0.95
MECP2-205ENST00000453960 GJD4Q96KN9 370 aaPredicted RBP20.98■□□□□ 0.95
MECP2-205ENST00000453960 RBM28Q9NW13 759 aaKnown RBP20.98■□□□□ 0.95
MECP2-205ENST00000453960 PYCARDQ9ULZ3 195 aa20.98■□□□□ 0.95
MECP2-205ENST00000453960 BTBD18B2RXH4 712 aa20.98■□□□□ 0.95
MECP2-205ENST00000453960 PRPF3O43395 683 aaKnown RBP20.98■□□□□ 0.95
MECP2-205ENST00000453960 DDAH1O94760 285 aa20.98■□□□□ 0.95
MECP2-205ENST00000453960 CALM1P0DP23 149 aa20.98■□□□□ 0.95
MECP2-205ENST00000453960 CALM2P0DP24 149 aa20.98■□□□□ 0.95
MECP2-205ENST00000453960 CALM3P0DP25 149 aa20.98■□□□□ 0.95
MECP2-205ENST00000453960 MARCKSP29966 332 aaPredicted RBP20.98■□□□□ 0.95
MECP2-205ENST00000453960 GRAPQ13588 217 aa20.98■□□□□ 0.95
MECP2-205ENST00000453960 GRAPLQ8TC17 118 aaPredicted RBP20.98■□□□□ 0.95
MECP2-205ENST00000453960 CRNKL1Q9BZJ0 848 aaKnown RBP20.98■□□□□ 0.95
MECP2-205ENST00000453960 CDK5RAP2Q96SN8 1893 aa20.97■□□□□ 0.95
MECP2-205ENST00000453960 PTGS1P23219 599 aa20.97■□□□□ 0.95
MECP2-205ENST00000453960 SYKP43405 635 aa20.97■□□□□ 0.95
MECP2-205ENST00000453960 PKN1Q16512 942 aa20.97■□□□□ 0.95
MECP2-205ENST00000453960 TRAPPC3LQ5T215 181 aa20.97■□□□□ 0.95
MECP2-205ENST00000453960 SPTY2D1Q68D10 685 aaPredicted RBP20.97■□□□□ 0.95
MECP2-205ENST00000453960 CCDC186Q7Z3E2 898 aa20.97■□□□□ 0.95
MECP2-205ENST00000453960 ZNF579Q8NAF0 562 aaKnown RBP20.97■□□□□ 0.95
MECP2-205ENST00000453960 ARPP21Q9UBL0 812 aaPredicted RBP20.97■□□□□ 0.95
MECP2-205ENST00000453960 MKRN1Q9UHC7 482 aaKnown RBP20.97■□□□□ 0.95
MECP2-205ENST00000453960 R3HCC1Q9Y3T6 440 aaKnown RBP20.97■□□□□ 0.95
MECP2-205ENST00000453960 USP17L12C9JPN9 530 aa20.96■□□□□ 0.95
MECP2-205ENST00000453960 USP17L21D6R901 530 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms