RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SNCAIPQ9Y6H5 919 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 SYNGAP1Q96PV0 1343 aa5.65□□□□□ -1.51
HMGB1P15-201ENST00000453854 SMAD7O15105 426 aaKnown RBP5.64□□□□□ -1.51
HMGB1P15-201ENST00000453854 ZNF862O60290 1169 aa5.64□□□□□ -1.51
HMGB1P15-201ENST00000453854 CTSBP07858 339 aa5.64□□□□□ -1.51
HMGB1P15-201ENST00000453854 CDK8P49336 464 aa5.64□□□□□ -1.51
HMGB1P15-201ENST00000453854 KIF4BQ2VIQ3 1234 aa5.64□□□□□ -1.51
HMGB1P15-201ENST00000453854 LRP10Q7Z4F1 713 aa5.64□□□□□ -1.51
HMGB1P15-201ENST00000453854 PUS7Q96PZ0 661 aaKnown RBP5.64□□□□□ -1.51
HMGB1P15-201ENST00000453854 FERD3LQ96RJ6 166 aa5.64□□□□□ -1.51
HMGB1P15-201ENST00000453854 CARD10Q9BWT7 1032 aa5.64□□□□□ -1.51
HMGB1P15-201ENST00000453854 CDK11AQ9UQ88 783 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P15-201ENST00000453854 MEIS3P2A8K0S8 358 aa5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 CASP7P55210 303 aa5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 INPP5AQ14642 412 aa5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 GK5Q6ZS86 529 aa5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 CYFIP1Q7L576 1253 aa5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 LSRQ86X29 649 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 HNRNPLLQ8WVV9 542 aaKnown RBP5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 CRBNQ96SW2 442 aa5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 ZC3H12CQ9C0D7 883 aaKnown RBP5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 PCDHA4Q9UN74 947 aa5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 TMA7Q9Y2S6 64 aaKnown RBP5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 MSRB2Q9Y3D2 182 aa5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 PCDHB14Q9Y5E9 798 aa5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 PCDHGC5Q9Y5F6 944 aa5.63□□□□□ -1.51
HMGB1P15-201ENST00000453854 LOC100289279A0A1B0GTE1 492 aa5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 ADAM11O75078 769 aa5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 DLGAP3O95886 979 aa5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 RING1Q06587 406 aa5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 BMS1Q14692 1282 aaKnown RBP5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 ZC3H12AQ5D1E8 599 aaKnown RBP5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 WIPI1Q5MNZ9 446 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 HP1BP3Q5SSJ5 553 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 LRFN4Q6PJG9 635 aa5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 HDXQ7Z353 690 aa5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 C19orf47Q8N9M1 422 aaKnown RBP5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 WDR89Q96FK6 387 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 PLPPR2Q96GM1 343 aa5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 ZFP64Q9NPA5 681 aa5.62□□□□□ -1.51
HMGB1P15-201ENST00000453854 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 F8W735 103 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 HTR3BO95264 441 aa5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 CDK11BP21127 795 aaKnown RBP5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 CD68P34810 354 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 HNRNPUQ00839 825 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 RASA3Q14644 834 aa5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 LRRFIP1Q32MZ4 808 aaKnown RBP5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 TMEM201Q5SNT2 666 aa5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 JAZF1Q86VZ6 243 aa5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 DZIP1LQ8IYY4 767 aaKnown RBP5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 NLGN1Q8N2Q7 840 aa5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 TAB3Q8N5C8 712 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 DCAF11Q8TEB1 546 aa5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 ACSBG1Q96GR2 724 aa5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 PSMG3-AS1Q96PY0 264 aa5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 TRIM55Q9BYV6 548 aa5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 CCDC113Q9H0I3 377 aa5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 KCNK4Q9NYG8 393 aa5.61□□□□□ -1.51
HMGB1P15-201ENST00000453854 DDX3YO15523 660 aaKnown RBP5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 HYAL3O43820 417 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 GRIN3BO60391 1043 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 LIG1P18858 919 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 NLRP12P59046 1061 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 FBXW10Q5XX13 1052 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 INTS3Q68E01 1043 aaKnown RBP5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 SDE2Q6IQ49 451 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 AGGF1Q8N302 714 aaeCLIP5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 CELF2-AS1Q8N7Q2 184 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 TMEM40Q8WWA1 233 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 MRFAP1L1Q96HT8 127 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 TM9SF2Q99805 663 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 WDR18Q9BV38 432 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 TNKS2Q9H2K2 1166 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 AKTIPQ9H8T0 292 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 ACTR10Q9NZ32 417 aa5.6□□□□□ -1.51
HMGB1P15-201ENST00000453854 MEGF11A6BM72 1044 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 FAM221BA6H8Z2 402 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 U2SURPO15042 1029 aaKnown RBP5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 AOC2O75106 756 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 WISP1O95388 367 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 ERVK-24P63145 666 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 PDE3AQ14432 1141 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 DDR2Q16832 855 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 PRR23CQ6ZRP0 262 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 TMEM130Q8N3G9 435 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 DEPDC7Q96QD5 511 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 SRPK1Q96SB4 655 aaKnown RBP5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 USP26Q9BXU7 913 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 ANTXR1Q9H6X2 564 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 SNTG2Q9NY99 539 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 GMIPQ9P107 970 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 REV1Q9UBZ9 1251 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 ADAM30Q9UKF2 790 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 R3HCC1Q9Y3T6 440 aaKnown RBP5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 CORINQ9Y5Q5 1042 aa5.59□□□□□ -1.51
HMGB1P15-201ENST00000453854 KRTAP9-6A0A140TA67 174 aa5.58□□□□□ -1.52
HMGB1P15-201ENST00000453854 A0A1W2PQH9 124 aa5.58□□□□□ -1.52
HMGB1P15-201ENST00000453854 SLC22A31A6NKX4 558 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms