RNA–Protein interactions for RNA: ENST00000453615.1

PSMD4-206, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 3

Gene PSMD4, Length 371 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-206	ENST00000453615	ZAP70	P43403	619 aa		10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	PPP4C	P60510	307 aa		10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	GPAT2	Q6NUI2	795 aa		10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	PANK1	Q8TE04	598 aa		10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	TRIM47	Q96LD4	638 aa		10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	AS3MT	Q9HBK9	375 aa		10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	BIN2	Q9UBW5	565 aa	Predicted RBP	10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	SRRD	Q9UH36	339 aa		10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	DBNL	Q9UJU6	430 aa	Known RBP	10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	AGTPBP1	Q9UPW5	1226 aa		10.47	□□□□□ -0.73
PSMD4-206	ENST00000453615	FAM196B	A6NMK8	535 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	USP17L5	A8MUK1	530 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	ASNS	P08243	561 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	OSBP	P22059	807 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	CYP7A1	P22680	504 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	CAP2	P40123	477 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	CAP1	Q01518	475 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	MAP3K12	Q12852	859 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	AACS	Q86V21	672 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	ZNF280C	Q8ND82	737 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	SH3TC2	Q8TF17	1288 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	TGFBRAP1	Q8WUH2	860 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	DDX19B	Q9UMR2	479 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	EXOC6B	Q9Y2D4	811 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	ADGRA2	Q96PE1	1338 aa		10.46	□□□□□ -0.73
PSMD4-206	ENST00000453615	MKI67	P46013	3256 aa	Known RBP	10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	DOCK2	Q92608	1830 aa		10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	FLT1	P17948	1338 aa		10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	MYPN	Q86TC9	1320 aa		10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	ECM2	O94769	699 aa	Predicted RBP	10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	BCR	P11274	1271 aa		10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	EN2	P19622	333 aa	Predicted RBP	10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	GRK4	P32298	578 aa		10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	UBXN2A	P68543	259 aa		10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	SPP2	Q13103	211 aa		10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	TTF1	Q15361	905 aa	Predicted RBP	10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	MAPKAPK5	Q8IW41	473 aa		10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	CLASRP	Q8N2M8	674 aa	Known RBP	10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	NKX2-3	Q8TAU0	364 aa		10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	EAF2	Q96CJ1	260 aa	Predicted RBP	10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	GCC1	Q96CN9	775 aa		10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	PIH1D3	Q9NQM4	214 aa	Known RBP	10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	GINM1	Q9NU53	330 aa		10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	TLR7	Q9NYK1	1049 aa	Known RBP	10.45	□□□□□ -0.74
PSMD4-206	ENST00000453615	TNPO2	O14787	897 aa	Known RBP	10.44	□□□□□ -0.74
PSMD4-206	ENST00000453615	MYC	P01106	439 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMD4-206	ENST00000453615	IFIT2	P09913	472 aa	Known RBP	10.44	□□□□□ -0.74
PSMD4-206	ENST00000453615	USP5	P45974	858 aa		10.44	□□□□□ -0.74
PSMD4-206	ENST00000453615	GCLC	P48506	637 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMD4-206	ENST00000453615	HMGCS2	P54868	508 aa		10.44	□□□□□ -0.74
PSMD4-206	ENST00000453615	SLAIN1	Q8ND83	568 aa		10.44	□□□□□ -0.74
PSMD4-206	ENST00000453615	COA7	Q96BR5	231 aa		10.44	□□□□□ -0.74
PSMD4-206	ENST00000453615	KIF1BP	Q96EK5	621 aa		10.44	□□□□□ -0.74
PSMD4-206	ENST00000453615	TMOD4	Q9NZQ9	345 aa		10.44	□□□□□ -0.74
PSMD4-206	ENST00000453615	RAB11FIP3	O75154	756 aa		10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	SLC34A2	O95436	690 aa		10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	SLURP2	P0DP57	97 aa		10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	IRX3	P78415	501 aa	Predicted RBP	10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	PRKCZ	Q05513	592 aa		10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	FAM110C	Q1W6H9	321 aa		10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	ADGRA1	Q86SQ6	560 aa		10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	CCDC84	Q86UT8	332 aa	Predicted RBP	10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	MAGEB6	Q8N7X4	407 aa		10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	RHPN1	Q8TCX5	695 aa		10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	WDR18	Q9BV38	432 aa		10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	SAP30BP	Q9UHR5	308 aa	Known RBP	10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	RCAN3	Q9UKA8	241 aa		10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	PALD1	Q9ULE6	856 aa		10.43	□□□□□ -0.74
PSMD4-206	ENST00000453615	C19orf81	C9J6K1	198 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	APBB1	O00213	710 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	ADCY3	O60266	1144 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	MTMR2	Q13614	643 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	TREML2	Q5T2D2	321 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	TTC6	Q86TZ1	520 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	METTL16	Q86W50	562 aa	Known RBP	10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	ANKRD13C	Q8N6S4	541 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	MIGA1	Q8NAN2	632 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	IL1RAPL2	Q9NP60	686 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	ZBTB40	Q9NUA8	1239 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	COG6	Q9Y2V7	657 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	CEP290	O15078	2479 aa		10.42	□□□□□ -0.74
PSMD4-206	ENST00000453615	BRCA2	P51587	3418 aa		10.41	□□□□□ -0.74
PSMD4-206	ENST00000453615	DOCK1	Q14185	1865 aa		10.41	□□□□□ -0.74
PSMD4-206	ENST00000453615	MAGEB6P1	A0A0J9YX57	407 aa		10.41	□□□□□ -0.74
PSMD4-206	ENST00000453615	USP17L10	C9JJH3	530 aa		10.41	□□□□□ -0.74
PSMD4-206	ENST00000453615	CCL5	P13501	91 aa		10.41	□□□□□ -0.74
PSMD4-206	ENST00000453615	CAPN2	P17655	700 aa		10.41	□□□□□ -0.74
PSMD4-206	ENST00000453615	CTGF	P29279	349 aa		10.41	□□□□□ -0.74
PSMD4-206	ENST00000453615	FLT3LG	P49771	235 aa		10.41	□□□□□ -0.74
PSMD4-206	ENST00000453615	BACE1	P56817	501 aa		10.41	□□□□□ -0.74
PSMD4-206	ENST00000453615	DYNLL1	P63167	89 aa	Known RBP	10.41	□□□□□ -0.74
PSMD4-206	ENST00000453615	IRF5	Q13568	498 aa		10.41	□□□□□ -0.74
PSMD4-206	ENST00000453615	SH3D19	Q5HYK7	790 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms