RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 ALDH1B1P30837 517 aa20.68■□□□□ 0.9
CTSB-204ENST00000453527 IQCA1Q86XH1 822 aa20.68■□□□□ 0.9
CTSB-204ENST00000453527 ENAHQ8N8S7 591 aaPredicted RBP20.68■□□□□ 0.9
CTSB-204ENST00000453527 AIFM3Q96NN9 605 aa20.68■□□□□ 0.9
CTSB-204ENST00000453527 FMNL1O95466 1100 aaPredicted RBP20.67■□□□□ 0.9
CTSB-204ENST00000453527 SSRP1Q08945 709 aaKnown RBP20.67■□□□□ 0.9
CTSB-204ENST00000453527 FANCBQ8NB91 859 aa20.67■□□□□ 0.9
CTSB-204ENST00000453527 SH3RF3Q8TEJ3 882 aaPredicted RBP20.67■□□□□ 0.9
CTSB-204ENST00000453527 ANP32BQ92688 251 aaKnown RBP20.67■□□□□ 0.9
CTSB-204ENST00000453527 FTOQ9C0B1 505 aaKnown RBP eCLIP20.67■□□□□ 0.93e-19■□□□□ 9.3
CTSB-204ENST00000453527 MCM9Q9NXL9 1143 aa20.67■□□□□ 0.9
CTSB-204ENST00000453527 MROH7-TTC4A0A0A0MT08 1334 aa20.67■□□□□ 0.9
CTSB-204ENST00000453527 USP5P45974 858 aa20.66■□□□□ 0.9
CTSB-204ENST00000453527 KIF23Q02241 960 aaPredicted RBP20.66■□□□□ 0.9
CTSB-204ENST00000453527 EVX2Q03828 476 aa20.66■□□□□ 0.9
CTSB-204ENST00000453527 PPP2R5BQ15173 497 aa20.66■□□□□ 0.9
CTSB-204ENST00000453527 CERS3Q8IU89 383 aa20.66■□□□□ 0.9
CTSB-204ENST00000453527 TBC1D22AQ8WUA7 517 aa20.66■□□□□ 0.9
CTSB-204ENST00000453527 NOL10Q9BSC4 688 aaKnown RBP20.66■□□□□ 0.9
CTSB-204ENST00000453527 COL11A2P13942 1736 aaPredicted RBP20.66■□□□□ 0.9
CTSB-204ENST00000453527 CYP2D6P10635 497 aa20.66■□□□□ 0.9
CTSB-204ENST00000453527 PDE4BQ07343 736 aa20.66■□□□□ 0.9
CTSB-204ENST00000453527 SLC26A6Q9BXS9 759 aa20.66■□□□□ 0.9
CTSB-204ENST00000453527 RTFDC1Q9BY42 306 aaPredicted RBP20.66■□□□□ 0.9
CTSB-204ENST00000453527 RTEL1Q9NZ71 1219 aa20.66■□□□□ 0.9
CTSB-204ENST00000453527 RGS17Q9UGC6 210 aaPredicted RBP20.66■□□□□ 0.9
CTSB-204ENST00000453527 POLR3DP05423 398 aaPredicted RBP20.65■□□□□ 0.9
CTSB-204ENST00000453527 USP17L8P0C7I0 530 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 KRT40Q6A162 431 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 WASF1Q92558 559 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 FAM205AQ6ZU69 1335 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 MFSD14BQ5SR56 506 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 IFIT1BQ5T764 474 aaKnown RBP20.65■□□□□ 0.9
CTSB-204ENST00000453527 C12orf60Q5U649 245 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 NBPF11Q86T75 865 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 TRIM22Q8IYM9 498 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 BICD2Q8TD16 824 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 NUP133Q8WUM0 1156 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 MASTLQ96GX5 879 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 DACT1Q9NYF0 836 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 CDK5RAP2Q96SN8 1893 aa20.65■□□□□ 0.9
CTSB-204ENST00000453527 KIF28PB7ZC32 967 aa20.64■□□□□ 0.89
CTSB-204ENST00000453527 MYSM1Q5VVJ2 828 aa20.64■□□□□ 0.89
CTSB-204ENST00000453527 CRACR2BQ8N4Y2 399 aaPredicted RBP20.64■□□□□ 0.89
CTSB-204ENST00000453527 MPNDQ8N594 471 aa20.64■□□□□ 0.89
CTSB-204ENST00000453527 FAM163AQ96GL9 167 aaPredicted RBP20.64■□□□□ 0.89
CTSB-204ENST00000453527 COA1Q9GZY4 146 aa20.64■□□□□ 0.89
CTSB-204ENST00000453527 NUP62CLQ9H1M0 184 aa20.64■□□□□ 0.89
CTSB-204ENST00000453527 DDX19AQ9NUU7 478 aaKnown RBP20.64■□□□□ 0.89
CTSB-204ENST00000453527 GPR75-ASB3A0A0A6YYF3 556 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 NT5C2P49902 561 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 CCDC173Q0VFZ6 552 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 TRIM29Q14134 588 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 MSL1Q68DK7 614 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 PPP1R9BQ96SB3 815 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 FUCA2Q9BTY2 467 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 POLR3EQ9NVU0 708 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 NAV1Q8NEY1 1877 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 CATIPQ7Z7H3 387 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 SLF2Q8IX21 1173 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 RNF214Q8ND24 703 aa20.63■□□□□ 0.89
CTSB-204ENST00000453527 UBE2Q2LH0YL09 131 aa20.62■□□□□ 0.89
CTSB-204ENST00000453527 RIMBP2O15034 1052 aa20.62■□□□□ 0.89
CTSB-204ENST00000453527 NR1I2O75469 434 aa20.62■□□□□ 0.89
CTSB-204ENST00000453527 BTDP43251 543 aa20.62■□□□□ 0.89
CTSB-204ENST00000453527 LINC00301Q8NCQ3 95 aa20.62■□□□□ 0.89
CTSB-204ENST00000453527 TGFBRAP1Q8WUH2 860 aa20.62■□□□□ 0.89
CTSB-204ENST00000453527 ZC3H12CQ9C0D7 883 aaKnown RBP20.62■□□□□ 0.89
CTSB-204ENST00000453527 DEXIO95424 95 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 CALM1P0DP23 149 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 CALM2P0DP24 149 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 CALM3P0DP25 149 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 POTEAQ6S8J7 498 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 MYH6P13533 1939 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 ROBO3Q96MS0 1386 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 YEATS4O95619 227 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 U2AF2P26368 475 aaKnown RBP eCLIP20.61■□□□□ 0.89
CTSB-204ENST00000453527 GUCY1A2P33402 732 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 ME1P48163 572 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 GTF2IP78347 998 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 TROAPQ12815 778 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 MAP3K11Q16584 847 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 FAM47AQ5JRC9 791 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 OLFM4Q6UX06 510 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 DPP8Q6V1X1 898 aaPredicted RBP20.61■□□□□ 0.89
CTSB-204ENST00000453527 AMOTL1Q8IY63 956 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
CTSB-204ENST00000453527 CLIC4Q9Y696 253 aa20.61■□□□□ 0.89
CTSB-204ENST00000453527 PLCG2P16885 1265 aa20.6■□□□□ 0.89
CTSB-204ENST00000453527 CAMK4Q16566 473 aa20.6■□□□□ 0.89
CTSB-204ENST00000453527 CMTR1Q8N1G2 835 aaKnown RBP20.6■□□□□ 0.89
CTSB-204ENST00000453527 CCDC82Q8N4S0 544 aa20.6■□□□□ 0.89
CTSB-204ENST00000453527 TNMDQ9H2S6 317 aa20.6■□□□□ 0.89
CTSB-204ENST00000453527 CLSTN2Q9H4D0 955 aa20.6■□□□□ 0.89
CTSB-204ENST00000453527 GAKO14976 1311 aa20.6■□□□□ 0.89
CTSB-204ENST00000453527 TSPY2A6NKD2 308 aa20.6■□□□□ 0.89
CTSB-204ENST00000453527 NMT2O60551 498 aa20.6■□□□□ 0.89
CTSB-204ENST00000453527 DDAH1O94760 285 aa20.6■□□□□ 0.89
CTSB-204ENST00000453527 SLC15A2Q16348 729 aa20.6■□□□□ 0.89
CTSB-204ENST00000453527 CCAR1Q8IX12 1150 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 502 ms