RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TMTC2Q8N394 836 aa13.65□□□□□ -0.22
VTA1-203ENST00000452973 CBX8Q9HC52 389 aa13.65□□□□□ -0.22
VTA1-203ENST00000452973 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
VTA1-203ENST00000452973 IFNAR1P17181 557 aa13.65□□□□□ -0.22
VTA1-203ENST00000452973 USP5P45974 858 aa13.65□□□□□ -0.22
VTA1-203ENST00000452973 ZNF165P49910 485 aa13.65□□□□□ -0.22
VTA1-203ENST00000452973 MTMR7Q9Y216 660 aa13.65□□□□□ -0.22
VTA1-203ENST00000452973 TAF1LQ8IZX4 1826 aa13.65□□□□□ -0.22
VTA1-203ENST00000452973 TNRC6CQ9HCJ0 1690 aaKnown RBP13.65□□□□□ -0.22
VTA1-203ENST00000452973 CACNA1SQ13698 1873 aa13.65□□□□□ -0.22
VTA1-203ENST00000452973 CHD4Q14839 1912 aa13.65□□□□□ -0.22
VTA1-203ENST00000452973 FMNL1O95466 1100 aaPredicted RBP13.65□□□□□ -0.23
VTA1-203ENST00000452973 ADRA2BP18089 450 aa13.65□□□□□ -0.23
VTA1-203ENST00000452973 ADALQ6DHV7 355 aa13.65□□□□□ -0.23
VTA1-203ENST00000452973 KCNG4Q8TDN1 519 aa13.65□□□□□ -0.23
VTA1-203ENST00000452973 POLR3EQ9NVU0 708 aa13.65□□□□□ -0.23
VTA1-203ENST00000452973 LEMD3Q9Y2U8 911 aa13.65□□□□□ -0.23
VTA1-203ENST00000452973 MYH13Q9UKX3 1938 aa13.64□□□□□ -0.23
VTA1-203ENST00000452973 C6orf229H3BNL8 230 aa13.64□□□□□ -0.23
VTA1-203ENST00000452973 TXNRD1Q16881 649 aa13.64□□□□□ -0.23
VTA1-203ENST00000452973 ZNF804AQ7Z570 1209 aa13.64□□□□□ -0.23
VTA1-203ENST00000452973 ANAPC4Q9UJX5 808 aa13.64□□□□□ -0.23
VTA1-203ENST00000452973 CCDC196A0A1B0GTZ2 297 aa13.64□□□□□ -0.23
VTA1-203ENST00000452973 AKAP17AQ02040 695 aaKnown RBP13.64□□□□□ -0.23
VTA1-203ENST00000452973 DDR1Q08345 913 aa13.64□□□□□ -0.23
VTA1-203ENST00000452973 SEC23AQ15436 765 aa13.64□□□□□ -0.23
VTA1-203ENST00000452973 SPTY2D1Q68D10 685 aaPredicted RBP13.64□□□□□ -0.23
VTA1-203ENST00000452973 CRACR2BQ8N4Y2 399 aaPredicted RBP13.64□□□□□ -0.23
VTA1-203ENST00000452973 NOL7Q9UMY1 257 aaKnown RBP13.64□□□□□ -0.23
VTA1-203ENST00000452973 SBF2Q86WG5 1849 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 TSPY2A6NKD2 308 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 SAFBQ15424 915 aaKnown RBP eCLIP13.63□□□□□ -0.23
VTA1-203ENST00000452973 CATIPQ7Z7H3 387 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 DIS3L2Q8IYB7 885 aaKnown RBP13.63□□□□□ -0.23
VTA1-203ENST00000452973 PROM2Q8N271 834 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 ENGASEQ8NFI3 743 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 SH3RF3Q8TEJ3 882 aaPredicted RBP13.63□□□□□ -0.23
VTA1-203ENST00000452973 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.63□□□□□ -0.23
VTA1-203ENST00000452973 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.63□□□□□ -0.23
VTA1-203ENST00000452973 MYH2Q9UKX2 1941 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 C4AP0C0L4 1744 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 WDHD1O75717 1129 aaPredicted RBP13.63□□□□□ -0.23
VTA1-203ENST00000452973 YEATS4O95619 227 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 NR5A1Q13285 461 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 WDR66Q8TBY9 1149 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 DYNLL2Q96FJ2 89 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 RBM17Q96I25 401 aaKnown RBP13.63□□□□□ -0.23
VTA1-203ENST00000452973 NAP1L5Q96NT1 182 aaPredicted RBP13.63□□□□□ -0.23
VTA1-203ENST00000452973 TTC12Q9H892 705 aaPredicted RBP13.63□□□□□ -0.23
VTA1-203ENST00000452973 BAZ2BQ9UIF8 2168 aaKnown RBP13.63□□□□□ -0.23
VTA1-203ENST00000452973 A0A1B0GUL6 1792 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 RIMBP2O15034 1052 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 PLEKHA8P1O95397 391 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 WASF1Q92558 559 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 CLIC6Q96NY7 704 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 SAP30BPQ9UHR5 308 aaKnown RBP13.63□□□□□ -0.23
VTA1-203ENST00000452973 GGA1Q9UJY5 639 aa13.63□□□□□ -0.23
VTA1-203ENST00000452973 BIN1O00499 593 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 SLC27A3Q5K4L6 730 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 SPECC1Q5M775 1068 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 ISM2Q6H9L7 571 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 C11orf57Q6ZUT1 292 aaPredicted RBP13.62□□□□□ -0.23
VTA1-203ENST00000452973 TDRD7Q8NHU6 1098 aaKnown RBP13.62□□□□□ -0.23
VTA1-203ENST00000452973 TGFBRAP1Q8WUH2 860 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 VPS54Q9P1Q0 977 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 ZKSCAN5Q9Y2L8 839 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
VTA1-203ENST00000452973 LY75O60449 1722 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 COL24A1Q17RW2 1714 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 HS1BP3Q53T59 392 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 OLFM4Q6UX06 510 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 RBM43Q6ZSC3 357 aaKnown RBP13.62□□□□□ -0.23
VTA1-203ENST00000452973 NBPF11Q86T75 865 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 FMR1NBQ8N0W7 255 aaPredicted RBP13.62□□□□□ -0.23
VTA1-203ENST00000452973 NOL10Q9BSC4 688 aaKnown RBP13.62□□□□□ -0.23
VTA1-203ENST00000452973 ATP8A2Q9NTI2 1148 aa13.62□□□□□ -0.23
VTA1-203ENST00000452973 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
VTA1-203ENST00000452973 IRS2Q9Y4H2 1338 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 DEXIO95424 95 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
VTA1-203ENST00000452973 SLC39A14Q15043 492 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 MAPKAPK5Q8IW41 473 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 OXER1Q8TDS5 423 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 CD209Q9NNX6 404 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 MMP1P03956 469 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 PDE4BQ07343 736 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 ZRSR1Q15695 479 aaKnown RBP13.61□□□□□ -0.23
VTA1-203ENST00000452973 NOSTRINQ8IVI9 506 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 DRC7Q8IY82 874 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 TRIM5Q9C035 493 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 MYH15Q9Y2K3 1946 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 CTAGE5O15320 804 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 ZNF202O95125 648 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 PFKFB1P16118 471 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 POLLQ9UGP5 575 aa13.61□□□□□ -0.23
VTA1-203ENST00000452973 POLRMTO00411 1230 aaKnown RBP13.6□□□□□ -0.23
VTA1-203ENST00000452973 APBA3O96018 575 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 U2AF2P26368 475 aaKnown RBP eCLIP13.6□□□□□ -0.234e-6■■□□□ 13.2
VTA1-203ENST00000452973 CRY2Q49AN0 593 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 MSL1Q68DK7 614 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms