RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 HSP90AB2PQ58FF8 381 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 CCNI2Q6ZMN8 369 aaPredicted RBP21.09■□□□□ 0.97
PTPA-223ENST00000452489 SYNE3Q6ZMZ3 975 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 CHST3Q7LGC8 479 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 PPFIBP1Q86W92 1011 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 TRIM10Q9UDY6 481 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 TTF2Q9UNY4 1162 aaKnown RBP21.09■□□□□ 0.97
PTPA-223ENST00000452489 ANKRD33BA6NCL7 494 aa21.08■□□□□ 0.97
PTPA-223ENST00000452489 CDR1P51861 262 aa21.08■□□□□ 0.97
PTPA-223ENST00000452489 TTMPQ5BVD1 217 aa21.08■□□□□ 0.97
PTPA-223ENST00000452489 NAA35Q5VZE5 725 aa21.08■□□□□ 0.97
PTPA-223ENST00000452489 NAA15Q9BXJ9 866 aaKnown RBP21.08■□□□□ 0.97
PTPA-223ENST00000452489 CPS1P31327 1500 aa21.08■□□□□ 0.96
PTPA-223ENST00000452489 AP1ARQ63HQ0 302 aa21.08■□□□□ 0.96
PTPA-223ENST00000452489 TRAPPC11Q7Z392 1133 aa21.08■□□□□ 0.96
PTPA-223ENST00000452489 WAPLQ7Z5K2 1190 aa21.08■□□□□ 0.96
PTPA-223ENST00000452489 ARMC2Q8NEN0 867 aa21.08■□□□□ 0.96
PTPA-223ENST00000452489 MED15Q96RN5 788 aa21.08■□□□□ 0.96
PTPA-223ENST00000452489 HPSEQ9Y251 543 aa21.08■□□□□ 0.96
PTPA-223ENST00000452489 NCKAP5LQ9HCH0 1330 aa21.07■□□□□ 0.96
PTPA-223ENST00000452489 PDIA3P30101 505 aaKnown RBP21.07■□□□□ 0.96
PTPA-223ENST00000452489 HDGFP51858 240 aaKnown RBP21.07■□□□□ 0.96
PTPA-223ENST00000452489 ADCY2Q08462 1091 aa21.07■□□□□ 0.96
PTPA-223ENST00000452489 DHX32Q7L7V1 743 aaKnown RBP21.07■□□□□ 0.96
PTPA-223ENST00000452489 PARP9Q8IXQ6 854 aa21.07■□□□□ 0.96
PTPA-223ENST00000452489 SH2D3CQ8N5H7 860 aa21.07■□□□□ 0.96
PTPA-223ENST00000452489 NDUFB9Q9Y6M9 179 aa21.07■□□□□ 0.96
PTPA-223ENST00000452489 CASP14P31944 242 aa21.07■□□□□ 0.96
PTPA-223ENST00000452489 PEX19P40855 299 aa21.07■□□□□ 0.96
PTPA-223ENST00000452489 SND1Q7KZF4 910 aaKnown RBP eCLIP21.07■□□□□ 0.96
PTPA-223ENST00000452489 SPATS2Q86XZ4 545 aaKnown RBP21.07■□□□□ 0.96
PTPA-223ENST00000452489 BORCS6Q96GS4 357 aa21.07■□□□□ 0.96
PTPA-223ENST00000452489 C8orf76Q96K31 380 aa21.07■□□□□ 0.96
PTPA-223ENST00000452489 ETAA1Q9NY74 926 aa21.07■□□□□ 0.96
PTPA-223ENST00000452489 TARSL2A2RTX5 802 aaKnown RBP21.06■□□□□ 0.96
PTPA-223ENST00000452489 GOLGA8KD6RF30 607 aa21.06■□□□□ 0.96
PTPA-223ENST00000452489 MFAP3LO75121 409 aa21.06■□□□□ 0.96
PTPA-223ENST00000452489 SASH1O94885 1247 aa21.06■□□□□ 0.96
PTPA-223ENST00000452489 EZRP15311 586 aaKnown RBP21.06■□□□□ 0.96
PTPA-223ENST00000452489 SKOR1P84550 965 aa21.06■□□□□ 0.96
PTPA-223ENST00000452489 IFT88Q13099 833 aa21.06■□□□□ 0.96
PTPA-223ENST00000452489 BEND3Q5T5X7 828 aa21.06■□□□□ 0.96
PTPA-223ENST00000452489 NBPF10Q6P3W6 841 aaKnown RBP21.06■□□□□ 0.96
PTPA-223ENST00000452489 YTHDF3Q7Z739 585 aaKnown RBP21.06■□□□□ 0.96
PTPA-223ENST00000452489 A0A1B0GTH6 734 aa21.06■□□□□ 0.96
PTPA-223ENST00000452489 AP1G2O75843 785 aa21.06■□□□□ 0.96
PTPA-223ENST00000452489 HDGFL1Q5TGJ6 251 aa21.06■□□□□ 0.96
PTPA-223ENST00000452489 CYB5D1Q6P9G0 228 aa21.06■□□□□ 0.96
PTPA-223ENST00000452489 MICALCLQ6ZW33 695 aa21.06■□□□□ 0.96
PTPA-223ENST00000452489 RIMS1Q86UR5 1692 aaKnown RBP21.06■□□□□ 0.96
PTPA-223ENST00000452489 ERVK-24P63145 666 aa21.05■□□□□ 0.96
PTPA-223ENST00000452489 PARD3BQ8TEW8 1205 aa21.05■□□□□ 0.96
PTPA-223ENST00000452489 SPATS2LQ9NUQ6 558 aaKnown RBP21.05■□□□□ 0.96
PTPA-223ENST00000452489 TPX2Q9ULW0 747 aaKnown RBP21.05■□□□□ 0.96
PTPA-223ENST00000452489 MAP3K19Q56UN5 1328 aa21.05■□□□□ 0.96
PTPA-223ENST00000452489 NRKQ7Z2Y5 1582 aa21.05■□□□□ 0.96
PTPA-223ENST00000452489 A0A0G2JLW4 131 aa21.05■□□□□ 0.96
PTPA-223ENST00000452489 ATP1A1P05023 1023 aaKnown RBP21.05■□□□□ 0.96
PTPA-223ENST00000452489 FXR1P51114 621 aaKnown RBP eCLIP21.05■□□□□ 0.96
PTPA-223ENST00000452489 KCTD16Q68DU8 428 aa21.05■□□□□ 0.96
PTPA-223ENST00000452489 AENQ8WTP8 325 aaKnown RBP21.05■□□□□ 0.96
PTPA-223ENST00000452489 U3KPZ7 1027 aaPredicted RBP21.05■□□□□ 0.96
PTPA-223ENST00000452489 MPHOSPH10O00566 681 aaKnown RBP21.04■□□□□ 0.96
PTPA-223ENST00000452489 GBP2P32456 591 aaPredicted RBP21.04■□□□□ 0.96
PTPA-223ENST00000452489 GUCY1A3Q02108 690 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 ZNF473Q8WTR7 871 aaKnown RBP21.04■□□□□ 0.96
PTPA-223ENST00000452489 SLF1Q9BQI6 1058 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 MAN1B1Q9UKM7 699 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 TAOK2Q9UL54 1235 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 GUCA1BQ9UMX6 200 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 PI4KAP2A4QPH2 592 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 LSP1P33241 339 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 TEFQ10587 303 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 SLC39A14Q15043 492 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 PLCB4Q15147 1175 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 NUTM2AQ8IVF1 878 aaPredicted RBP21.04■□□□□ 0.96
PTPA-223ENST00000452489 PI4KAP1Q8N8J0 262 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 SH3GL3Q99963 347 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 ATP6V0A4Q9HBG4 840 aa21.04■□□□□ 0.96
PTPA-223ENST00000452489 PIK3C2BO00750 1634 aa21.03■□□□□ 0.96
PTPA-223ENST00000452489 SEC24CP53992 1094 aa21.03■□□□□ 0.96
PTPA-223ENST00000452489 HDLBPQ00341 1268 aaKnown RBP21.03■□□□□ 0.96
PTPA-223ENST00000452489 SLC9C2Q5TAH2 1124 aa21.03■□□□□ 0.96
PTPA-223ENST00000452489 FUKQ8N0W3 1084 aa21.03■□□□□ 0.96
PTPA-223ENST00000452489 CCDC114Q96M63 670 aa21.03■□□□□ 0.96
PTPA-223ENST00000452489 FAM184BQ9ULE4 1060 aa21.03■□□□□ 0.96
PTPA-223ENST00000452489 SBNO1A3KN83 1393 aa21.03■□□□□ 0.96
PTPA-223ENST00000452489 SPRED3Q2MJR0 410 aa21.03■□□□□ 0.96
PTPA-223ENST00000452489 ENOX1Q8TC92 643 aaKnown RBP21.03■□□□□ 0.96
PTPA-223ENST00000452489 SPDL1Q96EA4 605 aa21.03■□□□□ 0.96
PTPA-223ENST00000452489 MYO1AQ9UBC5 1043 aa21.03■□□□□ 0.96
PTPA-223ENST00000452489 GYPCP04921 128 aa21.02■□□□□ 0.96
PTPA-223ENST00000452489 SSR1P43307 286 aaKnown RBP21.02■□□□□ 0.96
PTPA-223ENST00000452489 EXOSC10Q01780 885 aaKnown RBP21.02■□□□□ 0.96
PTPA-223ENST00000452489 ACCSLQ4AC99 568 aa21.02■□□□□ 0.96
PTPA-223ENST00000452489 NBPF14Q5TI25 921 aa21.02■□□□□ 0.96
PTPA-223ENST00000452489 APTXQ7Z2E3 356 aaKnown RBP21.02■□□□□ 0.96
PTPA-223ENST00000452489 CCDC26Q8TAB7 109 aa21.02■□□□□ 0.96
PTPA-223ENST00000452489 MICAL1Q8TDZ2 1067 aa21.02■□□□□ 0.96
PTPA-223ENST00000452489 PAGR1Q9BTK6 254 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms